RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 AACSQ86V21 672 aa14.91□□□□□ -0.02
LIG1-217ENST00000599165 ZNF296Q8WUU4 475 aaPredicted RBP14.91□□□□□ -0.02
LIG1-217ENST00000599165 ZNF341Q9BYN7 854 aa14.91□□□□□ -0.02
LIG1-217ENST00000599165 RAI14Q9P0K7 980 aa14.91□□□□□ -0.02
LIG1-217ENST00000599165 DOCK1Q14185 1865 aa14.91□□□□□ -0.02
LIG1-217ENST00000599165 PHF20L1A8MW92 1017 aa14.9□□□□□ -0.02
LIG1-217ENST00000599165 GPR25O00155 361 aa14.9□□□□□ -0.02
LIG1-217ENST00000599165 CAP1Q01518 475 aa14.9□□□□□ -0.02
LIG1-217ENST00000599165 NOM1Q5C9Z4 860 aaKnown RBP14.9□□□□□ -0.02
LIG1-217ENST00000599165 ERC1Q8IUD2 1116 aa14.9□□□□□ -0.02
LIG1-217ENST00000599165 SLF2Q8IX21 1173 aa14.9□□□□□ -0.02
LIG1-217ENST00000599165 OTUD5Q96G74 571 aa14.9□□□□□ -0.02
LIG1-217ENST00000599165 ANTXR1Q9H6X2 564 aa14.9□□□□□ -0.02
LIG1-217ENST00000599165 COL2A1P02458 1487 aaPredicted RBP14.89□□□□□ -0.03
LIG1-217ENST00000599165 IRF6O14896 467 aa14.89□□□□□ -0.03
LIG1-217ENST00000599165 NPM3O75607 178 aaKnown RBP14.89□□□□□ -0.03
LIG1-217ENST00000599165 INHBEP58166 350 aa14.89□□□□□ -0.03
LIG1-217ENST00000599165 PICALMQ13492 652 aa14.89□□□□□ -0.03
LIG1-217ENST00000599165 DGKZQ13574 1117 aa14.89□□□□□ -0.03
LIG1-217ENST00000599165 DCAF15Q66K64 600 aa14.89□□□□□ -0.03
LIG1-217ENST00000599165 ERO1BQ86YB8 467 aa14.89□□□□□ -0.03
LIG1-217ENST00000599165 SH3RF3Q8TEJ3 882 aaPredicted RBP14.89□□□□□ -0.03
LIG1-217ENST00000599165 LRP2BPQ9P2M1 347 aa14.89□□□□□ -0.03
LIG1-217ENST00000599165 CSADQ9Y600 493 aa14.89□□□□□ -0.03
LIG1-217ENST00000599165 ATAD5Q96QE3 1844 aa14.89□□□□□ -0.03
LIG1-217ENST00000599165 ZSWIM8A7E2V4 1837 aa14.88□□□□□ -0.03
LIG1-217ENST00000599165 APBB1O00213 710 aa14.88□□□□□ -0.03
LIG1-217ENST00000599165 PPP4CP60510 307 aa14.88□□□□□ -0.03
LIG1-217ENST00000599165 GSTO1P78417 241 aa14.88□□□□□ -0.03
LIG1-217ENST00000599165 NOL9Q5SY16 702 aaKnown RBP14.88□□□□□ -0.03
LIG1-217ENST00000599165 FAM43AQ8N2R8 423 aa14.88□□□□□ -0.03
LIG1-217ENST00000599165 HOOK2Q96ED9 719 aa14.88□□□□□ -0.03
LIG1-217ENST00000599165 DDX60LQ5H9U9 1706 aaKnown RBP14.88□□□□□ -0.03
LIG1-217ENST00000599165 HMMRO75330 724 aa14.87□□□□□ -0.03
LIG1-217ENST00000599165 ALDH1A1P00352 501 aa14.87□□□□□ -0.03
LIG1-217ENST00000599165 LDHCP07864 332 aa14.87□□□□□ -0.03
LIG1-217ENST00000599165 CRHR2Q13324 411 aa14.87□□□□□ -0.03
LIG1-217ENST00000599165 PPIL2Q13356 520 aa14.87□□□□□ -0.03
LIG1-217ENST00000599165 MOGSQ13724 837 aa14.87□□□□□ -0.03
LIG1-217ENST00000599165 RRP1BQ14684 758 aaKnown RBP14.87□□□□□ -0.03
LIG1-217ENST00000599165 HSP90AB4PQ58FF6 505 aa14.87□□□□□ -0.03
LIG1-217ENST00000599165 NAA16Q6N069 864 aaPredicted RBP14.87□□□□□ -0.03
LIG1-217ENST00000599165 KIF1BPQ96EK5 621 aa14.87□□□□□ -0.03
LIG1-217ENST00000599165 OSBPL5Q9H0X9 879 aaPredicted RBP14.87□□□□□ -0.03
LIG1-217ENST00000599165 AATFQ9NY61 560 aaKnown RBP eCLIP14.87□□□□□ -0.03
LIG1-217ENST00000599165 MYH1P12882 1939 aa14.86□□□□□ -0.03
LIG1-217ENST00000599165 CCL15-CCL14A0A0B4J2E2 113 aa14.86□□□□□ -0.03
LIG1-217ENST00000599165 FAM196BA6NMK8 535 aa14.86□□□□□ -0.03
LIG1-217ENST00000599165 CCL15Q16663 113 aa14.86□□□□□ -0.03
LIG1-217ENST00000599165 CTU1Q7Z7A3 348 aaKnown RBP14.86□□□□□ -0.03
LIG1-217ENST00000599165 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.86□□□□□ -0.03
LIG1-217ENST00000599165 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.86□□□□□ -0.03
LIG1-217ENST00000599165 KCNH4Q9UQ05 1017 aa14.86□□□□□ -0.03
LIG1-217ENST00000599165 HTTP42858 3142 aa14.86□□□□□ -0.03
LIG1-217ENST00000599165 RAB11FIP3O75154 756 aa14.85□□□□□ -0.03
LIG1-217ENST00000599165 MAP4K4O95819 1239 aaPredicted RBP14.85□□□□□ -0.03
LIG1-217ENST00000599165 GTF2A2P52657 109 aa14.85□□□□□ -0.03
LIG1-217ENST00000599165 RRP1P56182 461 aaKnown RBP14.85□□□□□ -0.03
LIG1-217ENST00000599165 DYNLL1P63167 89 aaKnown RBP14.85□□□□□ -0.03
LIG1-217ENST00000599165 PPATQ06203 517 aa14.85□□□□□ -0.03
LIG1-217ENST00000599165 TEX11Q8IYF3 940 aa14.85□□□□□ -0.03
LIG1-217ENST00000599165 MYH7P12883 1935 aa14.85□□□□□ -0.03
LIG1-217ENST00000599165 BTBD19C9JJ37 291 aa14.84□□□□□ -0.03
LIG1-217ENST00000599165 SMARCA5O60264 1052 aaPredicted RBP14.84□□□□□ -0.03
LIG1-217ENST00000599165 TBC1D12O60347 775 aa14.84□□□□□ -0.03
LIG1-217ENST00000599165 IGSF3O75054 1194 aa14.84□□□□□ -0.03
LIG1-217ENST00000599165 FKTNO75072 461 aa14.84□□□□□ -0.03
LIG1-217ENST00000599165 ZSCAN29Q8IWY8 852 aaPredicted RBP14.84□□□□□ -0.03
LIG1-217ENST00000599165 SCYL3Q8IZE3 742 aa14.84□□□□□ -0.03
LIG1-217ENST00000599165 CLASRPQ8N2M8 674 aaKnown RBP14.84□□□□□ -0.03
LIG1-217ENST00000599165 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.84□□□□□ -0.03
LIG1-217ENST00000599165 EDC3Q96F86 508 aaKnown RBP14.84□□□□□ -0.03
LIG1-217ENST00000599165 YTHDC1Q96MU7 727 aaKnown RBP14.84□□□□□ -0.03
LIG1-217ENST00000599165 CHMP4BQ9H444 224 aaKnown RBP14.84□□□□□ -0.03
LIG1-217ENST00000599165 DNAJC18Q9H819 358 aa14.84□□□□□ -0.03
LIG1-217ENST00000599165 PCDHB15Q9Y5E8 787 aa14.84□□□□□ -0.03
LIG1-217ENST00000599165 IDH1O75874 414 aaKnown RBP14.83□□□□□ -0.04
LIG1-217ENST00000599165 CYP7A1P22680 504 aa14.83□□□□□ -0.04
LIG1-217ENST00000599165 SNAPC2Q13487 334 aa14.83□□□□□ -0.04
LIG1-217ENST00000599165 CCDC84Q86UT8 332 aaPredicted RBP14.83□□□□□ -0.04
LIG1-217ENST00000599165 MAGEB6Q8N7X4 407 aa14.83□□□□□ -0.04
LIG1-217ENST00000599165 FLT1P17948 1338 aa14.83□□□□□ -0.04
LIG1-217ENST00000599165 CETPP11597 493 aa14.82□□□□□ -0.04
LIG1-217ENST00000599165 PTPRAP18433 802 aa14.82□□□□□ -0.04
LIG1-217ENST00000599165 JAG1P78504 1218 aa14.82□□□□□ -0.04
LIG1-217ENST00000599165 METTL16Q86W50 562 aaKnown RBP14.82□□□□□ -0.04
LIG1-217ENST00000599165 MAPKAPK5Q8IW41 473 aa14.82□□□□□ -0.04
LIG1-217ENST00000599165 MIGA1Q8NAN2 632 aa14.82□□□□□ -0.04
LIG1-217ENST00000599165 TGFBRAP1Q8WUH2 860 aa14.82□□□□□ -0.04
LIG1-217ENST00000599165 RIOK1Q9BRS2 568 aaKnown RBP14.82□□□□□ -0.04
LIG1-217ENST00000599165 DCTPP1Q9H773 170 aa14.82□□□□□ -0.04
LIG1-217ENST00000599165 ADGRA2Q96PE1 1338 aa14.82□□□□□ -0.04
LIG1-217ENST00000599165 LOC285556D6RIA3 1793 aa14.82□□□□□ -0.04
LIG1-217ENST00000599165 NAV1Q8NEY1 1877 aa14.82□□□□□ -0.04
LIG1-217ENST00000599165 TCRBV5S4A2TA0A5A2 114 aa14.81□□□□□ -0.04
LIG1-217ENST00000599165 CCDC85CA6NKD9 419 aa14.81□□□□□ -0.04
LIG1-217ENST00000599165 BAG3O95817 575 aa14.81□□□□□ -0.04
LIG1-217ENST00000599165 CHGBP05060 677 aa14.81□□□□□ -0.04
LIG1-217ENST00000599165 IFIT2P09913 472 aaKnown RBP14.81□□□□□ -0.04
LIG1-217ENST00000599165 TAF1CQ15572 869 aaPredicted RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms