RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.22■■■□□ 2.11
CCDC61-207ENST00000599044 ZFYVE28Q9HCC9 887 aa28.22■■■□□ 2.11
CCDC61-207ENST00000599044 SURF6O75683 361 aaKnown RBP28.21■■■□□ 2.11
CCDC61-207ENST00000599044 PICALMQ13492 652 aa28.21■■■□□ 2.11
CCDC61-207ENST00000599044 TNNI3KQ59H18 835 aa28.21■■■□□ 2.11
CCDC61-207ENST00000599044 SLF2Q8IX21 1173 aa28.21■■■□□ 2.11
CCDC61-207ENST00000599044 NSUN4Q96CB9 384 aaKnown RBP28.21■■■□□ 2.11
CCDC61-207ENST00000599044 DBNDD2Q9BQY9 259 aa28.21■■■□□ 2.11
CCDC61-207ENST00000599044 SNRKQ9NRH2 765 aa28.21■■■□□ 2.11
CCDC61-207ENST00000599044 FPGT-TNNI3KV9GXZ4 949 aa28.21■■■□□ 2.11
CCDC61-207ENST00000599044 KIAA0100Q14667 2235 aaKnown RBP28.2■■■□□ 2.11
CCDC61-207ENST00000599044 NOL9Q5SY16 702 aaKnown RBP28.2■■■□□ 2.1
CCDC61-207ENST00000599044 PANK1Q8TE04 598 aa28.2■■■□□ 2.1
CCDC61-207ENST00000599044 PTPN22Q9Y2R2 807 aa28.2■■■□□ 2.1
CCDC61-207ENST00000599044 OS9Q13438 667 aaPredicted RBP28.19■■■□□ 2.1
CCDC61-207ENST00000599044 MOGSQ13724 837 aa28.19■■■□□ 2.1
CCDC61-207ENST00000599044 ZSCAN29Q8IWY8 852 aaPredicted RBP28.19■■■□□ 2.1
CCDC61-207ENST00000599044 EFCC1Q9HA90 598 aa28.19■■■□□ 2.1
CCDC61-207ENST00000599044 GPR108Q9NPR9 543 aa28.19■■■□□ 2.1
CCDC61-207ENST00000599044 RAI14Q9P0K7 980 aa28.18■■■□□ 2.1
CCDC61-207ENST00000599044 KCNH4Q9UQ05 1017 aa28.18■■■□□ 2.1
CCDC61-207ENST00000599044 NOP58Q9Y2X3 529 aaKnown RBP28.18■■■□□ 2.1
CCDC61-207ENST00000599044 CENPFP49454 3210 aa28.18■■■□□ 2.1
CCDC61-207ENST00000599044 AK9Q5TCS8 1911 aa28.18■■■□□ 2.1
CCDC61-207ENST00000599044 UQCRFS1P1P0C7P4 283 aa28.17■■■□□ 2.1
CCDC61-207ENST00000599044 MAP3K10Q02779 954 aa28.17■■■□□ 2.1
CCDC61-207ENST00000599044 TLR2O60603 784 aa28.16■■■□□ 2.1
CCDC61-207ENST00000599044 TTC39AQ5SRH9 613 aa28.15■■■□□ 2.1
CCDC61-207ENST00000599044 CEP85Q6P2H3 762 aa28.15■■■□□ 2.1
CCDC61-207ENST00000599044 ARHGAP39Q9C0H5 1083 aa28.15■■■□□ 2.1
CCDC61-207ENST00000599044 ZCCHC17Q9NP64 241 aaKnown RBP28.15■■■□□ 2.1
CCDC61-207ENST00000599044 TLR7Q9NYK1 1049 aaKnown RBP28.15■■■□□ 2.1
CCDC61-207ENST00000599044 LRP2BPQ9P2M1 347 aa28.15■■■□□ 2.1
CCDC61-207ENST00000599044 GSTO1P78417 241 aa28.14■■■□□ 2.1
CCDC61-207ENST00000599044 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.14■■■□□ 2.1
CCDC61-207ENST00000599044 DOCK2Q92608 1830 aa28.13■■■□□ 2.09
CCDC61-207ENST00000599044 PDHXO00330 501 aa28.13■■■□□ 2.09
CCDC61-207ENST00000599044 CYP2E1P05181 493 aaPredicted RBP28.13■■■□□ 2.09
CCDC61-207ENST00000599044 LDHCP07864 332 aa28.13■■■□□ 2.09
CCDC61-207ENST00000599044 ANKRD23Q86SG2 305 aa28.13■■■□□ 2.09
CCDC61-207ENST00000599044 SCYL3Q8IZE3 742 aa28.13■■■□□ 2.09
CCDC61-207ENST00000599044 EAF2Q96CJ1 260 aaPredicted RBP28.13■■■□□ 2.09
CCDC61-207ENST00000599044 CCDC8Q9H0W5 538 aaPredicted RBP28.13■■■□□ 2.09
CCDC61-207ENST00000599044 DBNLQ9UJU6 430 aaKnown RBP28.13■■■□□ 2.09
CCDC61-207ENST00000599044 FAM196BA6NMK8 535 aa28.12■■■□□ 2.09
CCDC61-207ENST00000599044 PTPRAP18433 802 aa28.12■■■□□ 2.09
CCDC61-207ENST00000599044 CCDC158Q5M9N0 1113 aa28.12■■■□□ 2.09
CCDC61-207ENST00000599044 ZHX2Q9Y6X8 837 aa28.12■■■□□ 2.09
CCDC61-207ENST00000599044 ECM2O94769 699 aaPredicted RBP28.11■■■□□ 2.09
CCDC61-207ENST00000599044 GPAT2Q6NUI2 795 aa28.11■■■□□ 2.09
CCDC61-207ENST00000599044 C17orf99Q6UX52 265 aa28.11■■■□□ 2.09
CCDC61-207ENST00000599044 ADGRA1Q86SQ6 560 aa28.11■■■□□ 2.09
CCDC61-207ENST00000599044 SH3RF3Q8TEJ3 882 aaPredicted RBP28.11■■■□□ 2.09
CCDC61-207ENST00000599044 CPA4Q9UI42 421 aa28.11■■■□□ 2.09
CCDC61-207ENST00000599044 ZSWIM8A7E2V4 1837 aa28.11■■■□□ 2.09
CCDC61-207ENST00000599044 POTEFA5A3E0 1075 aa28.1■■■□□ 2.09
CCDC61-207ENST00000599044 NPM3O75607 178 aaKnown RBP28.1■■■□□ 2.09
CCDC61-207ENST00000599044 ZAP70P43403 619 aa28.1■■■□□ 2.09
CCDC61-207ENST00000599044 CCDC84Q86UT8 332 aaPredicted RBP28.1■■■□□ 2.09
CCDC61-207ENST00000599044 PIH1D3Q9NQM4 214 aaKnown RBP28.1■■■□□ 2.09
CCDC61-207ENST00000599044 PICK1Q9NRD5 415 aa28.1■■■□□ 2.09
CCDC61-207ENST00000599044 CXCL11O14625 94 aa28.09■■■□□ 2.09
CCDC61-207ENST00000599044 CTGFP29279 349 aa28.09■■■□□ 2.09
CCDC61-207ENST00000599044 LACTBP83111 547 aaPredicted RBP28.09■■■□□ 2.09
CCDC61-207ENST00000599044 ZNF512BQ96KM6 892 aaPredicted RBP28.09■■■□□ 2.09
CCDC61-207ENST00000599044 EXOC6BQ9Y2D4 811 aa28.09■■■□□ 2.09
CCDC61-207ENST00000599044 AFG3L2Q9Y4W6 797 aa28.09■■■□□ 2.09
CCDC61-207ENST00000599044 PTCH2Q9Y6C5 1203 aa28.09■■■□□ 2.09
CCDC61-207ENST00000599044 ADGRA2Q96PE1 1338 aa28.09■■■□□ 2.09
CCDC61-207ENST00000599044 CTNND1O60716 968 aaKnown RBP28.08■■■□□ 2.09
CCDC61-207ENST00000599044 NAA16Q6N069 864 aaPredicted RBP28.08■■■□□ 2.09
CCDC61-207ENST00000599044 TEX11Q8IYF3 940 aa28.08■■■□□ 2.09
CCDC61-207ENST00000599044 ARMC5Q96C12 935 aa28.08■■■□□ 2.09
CCDC61-207ENST00000599044 OSBPL5Q9H0X9 879 aaPredicted RBP28.08■■■□□ 2.09
CCDC61-207ENST00000599044 AATFQ9NY61 560 aaKnown RBP eCLIP28.08■■■□□ 2.09
CCDC61-207ENST00000599044 TBC1D12O60347 775 aa28.07■■■□□ 2.08
CCDC61-207ENST00000599044 RRP1BQ14684 758 aaKnown RBP28.07■■■□□ 2.08
CCDC61-207ENST00000599044 BRCA2P51587 3418 aa28.07■■■□□ 2.08
CCDC61-207ENST00000599044 A0A0G2JLL6 359 aaPredicted RBP28.06■■■□□ 2.08
CCDC61-207ENST00000599044 MAP4K4O95819 1239 aaPredicted RBP28.06■■■□□ 2.08
CCDC61-207ENST00000599044 CYP2C8P10632 490 aa28.06■■■□□ 2.08
CCDC61-207ENST00000599044 PRPF38BQ5VTL8 546 aaKnown RBP28.06■■■□□ 2.08
CCDC61-207ENST00000599044 PRRT2Q7Z6L0 340 aaPredicted RBP28.06■■■□□ 2.08
CCDC61-207ENST00000599044 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.06■■■□□ 2.08
CCDC61-207ENST00000599044 NDUFB9Q9Y6M9 179 aa28.06■■■□□ 2.08
CCDC61-207ENST00000599044 MKI67P46013 3256 aaKnown RBP28.06■■■□□ 2.08
CCDC61-207ENST00000599044 ARHGEF6Q15052 776 aa28.04■■■□□ 2.08
CCDC61-207ENST00000599044 TRIM75PA6NK02 468 aa28.03■■■□□ 2.08
CCDC61-207ENST00000599044 PPP4CP60510 307 aa28.03■■■□□ 2.08
CCDC61-207ENST00000599044 COG6Q9Y2V7 657 aa28.03■■■□□ 2.08
CCDC61-207ENST00000599044 COL2A1P02458 1487 aaPredicted RBP28.02■■■□□ 2.08
CCDC61-207ENST00000599044 KIF22Q14807 665 aa28.02■■■□□ 2.08
CCDC61-207ENST00000599044 GADL1Q6ZQY3 521 aa28.02■■■□□ 2.08
CCDC61-207ENST00000599044 TGFBRAP1Q8WUH2 860 aa28.02■■■□□ 2.08
CCDC61-207ENST00000599044 ZNF333Q96JL9 665 aa28.02■■■□□ 2.08
CCDC61-207ENST00000599044 TRIM47Q96LD4 638 aa28.02■■■□□ 2.08
CCDC61-207ENST00000599044 ANTXR1Q9H6X2 564 aa28.02■■■□□ 2.08
CCDC61-207ENST00000599044 BAG3O95817 575 aa28.01■■■□□ 2.07
CCDC61-207ENST00000599044 DYNLL1P63167 89 aaKnown RBP28.01■■■□□ 2.07
CCDC61-207ENST00000599044 AACSQ86V21 672 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms