RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, human

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRAMD1A-209	ENST00000598580	ARHGAP45	Q92619	1136 aa		13.7	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	SHISA4	Q96DD7	197 aa		13.7	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	TMEM106C	Q9BVX2	250 aa		13.7	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	HMG20B	Q9P0W2	317 aa		13.7	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	ABCF2	Q9UG63	623 aa		13.7	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	SRRD	Q9UH36	339 aa		13.7	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	AFG3L2	Q9Y4W6	797 aa		13.7	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	ZHX2	Q9Y6X8	837 aa		13.7	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	TRIOBP	Q9H2D6	2365 aa		13.69	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	GPR75-ASB3	A0A0A6YYF3	556 aa		13.69	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	PNMA6E	A0A0J9YXQ4	647 aa		13.69	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	CXCL11	O14625	94 aa		13.69	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	TRIM27	P14373	513 aa		13.69	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	BTD	P43251	543 aa		13.69	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	PCDH10	Q9P2E7	1040 aa		13.69	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	PDS5A	Q29RF7	1337 aa	Known RBP	13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580		A0A0G2JLL6	359 aa	Predicted RBP	13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	FAM196B	A6NMK8	535 aa		13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	PICALM	Q13492	652 aa		13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	ARHGEF6	Q15052	776 aa		13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	SLC4A8	Q2Y0W8	1093 aa		13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	NBPF11	Q86T75	865 aa		13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	SCYL3	Q8IZE3	742 aa		13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	GABRQ	Q9UN88	632 aa		13.68	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	GNRH1	P01148	92 aa		13.67	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	KIF22	Q14807	665 aa		13.67	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	MROH7-TTC4	A0A0A0MT08	1334 aa		13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580		H0YGN5	161 aa		13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	CCER2	I3L3R5	266 aa		13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	FMNL1	O95466	1100 aa	Predicted RBP	13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	GNAI3	P08754	354 aa		13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	JAG1	P78504	1218 aa		13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	PRKCZ	Q05513	592 aa		13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	UBE2Q1	Q7Z7E8	422 aa		13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	DZIP1	Q86YF9	867 aa	Known RBP	13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	SPATA5	Q8NB90	893 aa		13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	CLUAP1	Q96AJ1	413 aa		13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	NSUN4	Q96CB9	384 aa	Known RBP	13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	NEUROD6	Q96NK8	337 aa		13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	COLQ	Q9Y215	455 aa	Predicted RBP	13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	RANBP2	P49792	3224 aa	Known RBP	13.66	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	TRIM75P	A6NK02	468 aa		13.65	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	CTNND1	O60716	968 aa	Known RBP	13.65	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	MCAM	P43121	646 aa		13.65	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	PRMT2	P55345	433 aa		13.65	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	TREML2	Q5T2D2	321 aa		13.65	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	ERICH6	Q7L0X2	663 aa		13.65	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.65	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	ZGPAT	Q8N5A5	531 aa	Known RBP	13.65	□□□□□ -0.22
GRAMD1A-209	ENST00000598580	MYPN	Q86TC9	1320 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	MYH2	Q9UKX2	1941 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	MYH13	Q9UKX3	1938 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	CCL5	P13501	91 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	ARID4A	P29374	1257 aa	Predicted RBP	13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	GRK4	P32298	578 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	FXR1	P51114	621 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	MVP	Q14764	893 aa	Known RBP	13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	ATF7IP	Q6VMQ6	1270 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	GADL1	Q6ZQY3	521 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	FRAT1	Q92837	279 aa	Predicted RBP	13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	PARK7	Q99497	189 aa	Known RBP	13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	PICK1	Q9NRD5	415 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	SNRK	Q9NRH2	765 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	HDAC5	Q9UQL6	1122 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	AKAP2	Q9Y2D5	859 aa		13.64	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	AK9	Q5TCS8	1911 aa		13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	TBC1D12	O60347	775 aa		13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	NPM3	O75607	178 aa	Known RBP	13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	GNAI2	P04899	355 aa		13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	POLA2	Q14181	598 aa		13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	FASTKD5	Q7L8L6	764 aa	Known RBP	13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	ADGRA1	Q86SQ6	560 aa		13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	TMEM57	Q8N5G2	664 aa		13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	RAET1E	Q8TD07	263 aa		13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	GCC1	Q96CN9	775 aa		13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	UNC93B1	Q9H1C4	597 aa		13.63	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	ELN	P15502	786 aa		13.62	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	GJA8	P48165	433 aa		13.62	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	FLT3LG	P49771	235 aa		13.62	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	DBNDD2	Q9BQY9	259 aa		13.62	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.62	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	RAI14	Q9P0K7	980 aa		13.62	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	SLC45A1	Q9Y2W3	748 aa		13.62	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	PEX10	O60683	326 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	GJB1	P08034	283 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	RLBP1	P12271	317 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	HOXD10	P28358	340 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	FCGRT	P55899	365 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	SPP2	Q13103	211 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	SLF2	Q8IX21	1173 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	ANKRD13C	Q8N6S4	541 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	RNF208	Q9H0X6	261 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	C1orf115	Q9H7X2	142 aa		13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
GRAMD1A-209	ENST00000598580	AGTPBP1	Q9UPW5	1226 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms