RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 CSRNP1Q96S65 589 aa21.44■■□□□ 1.02
USHBP1-209ENST00000598570 RIOK1Q9BRS2 568 aaKnown RBP21.44■■□□□ 1.02
USHBP1-209ENST00000598570 BOLA2Q9H3K6 86 aa21.44■■□□□ 1.02
USHBP1-209ENST00000598570 DDTLA6NHG4 134 aaPredicted RBP21.43■■□□□ 1.02
USHBP1-209ENST00000598570 PHF20L1A8MW92 1017 aa21.43■■□□□ 1.02
USHBP1-209ENST00000598570 GOLIM4O00461 696 aa21.43■■□□□ 1.02
USHBP1-209ENST00000598570 HSPA1AP0DMV8 641 aaKnown RBP21.43■■□□□ 1.02
USHBP1-209ENST00000598570 HSPA1BP0DMV9 641 aaKnown RBP21.43■■□□□ 1.02
USHBP1-209ENST00000598570 ZBTB48P10074 688 aaPredicted RBP21.43■■□□□ 1.02
USHBP1-209ENST00000598570 PDE6AP16499 860 aa21.43■■□□□ 1.02
USHBP1-209ENST00000598570 DCAF15Q66K64 600 aa21.43■■□□□ 1.02
USHBP1-209ENST00000598570 MAGEB6Q8N7X4 407 aa21.43■■□□□ 1.02
USHBP1-209ENST00000598570 PI4K2BQ8TCG2 481 aa21.43■■□□□ 1.02
USHBP1-209ENST00000598570 SLC10A4Q96EP9 437 aa21.43■■□□□ 1.02
USHBP1-209ENST00000598570 CLMNQ96JQ2 1002 aa21.43■■□□□ 1.02
USHBP1-209ENST00000598570 PRKG1Q13976 671 aa21.42■■□□□ 1.02
USHBP1-209ENST00000598570 SLC9C2Q5TAH2 1124 aa21.42■■□□□ 1.02
USHBP1-209ENST00000598570 EDC3Q96F86 508 aaKnown RBP21.42■■□□□ 1.02
USHBP1-209ENST00000598570 OSBPL5Q9H0X9 879 aaPredicted RBP21.42■■□□□ 1.02
USHBP1-209ENST00000598570 AATFQ9NY61 560 aaKnown RBP eCLIP21.42■■□□□ 1.02
USHBP1-209ENST00000598570 TESPA1A2RU30 521 aaPredicted RBP21.41■■□□□ 1.02
USHBP1-209ENST00000598570 CA12O43570 354 aa21.41■■□□□ 1.02
USHBP1-209ENST00000598570 UBE3CQ15386 1083 aa21.41■■□□□ 1.02
USHBP1-209ENST00000598570 NOL9Q5SY16 702 aaKnown RBP21.41■■□□□ 1.02
USHBP1-209ENST00000598570 PAXIP1Q6ZW49 1069 aaPredicted RBP21.41■■□□□ 1.02
USHBP1-209ENST00000598570 OTUD7AQ8TE49 926 aaPredicted RBP21.41■■□□□ 1.02
USHBP1-209ENST00000598570 ZNF341Q9BYN7 854 aa21.41■■□□□ 1.02
USHBP1-209ENST00000598570 ADD2P35612 726 aa21.4■■□□□ 1.02
USHBP1-209ENST00000598570 GJA5P36382 358 aa21.4■■□□□ 1.02
USHBP1-209ENST00000598570 VGLL4Q14135 290 aa21.4■■□□□ 1.02
USHBP1-209ENST00000598570 ANKRD45Q5TZF3 282 aa21.4■■□□□ 1.02
USHBP1-209ENST00000598570 TEX11Q8IYF3 940 aa21.4■■□□□ 1.02
USHBP1-209ENST00000598570 GPATCH3Q96I76 525 aa21.4■■□□□ 1.02
USHBP1-209ENST00000598570 WNK4Q96J92 1243 aa21.4■■□□□ 1.02
USHBP1-209ENST00000598570 DNAJC2Q99543 621 aaKnown RBP21.4■■□□□ 1.02
USHBP1-209ENST00000598570 DHX36Q9H2U1 1008 aaKnown RBP21.4■■□□□ 1.02
USHBP1-209ENST00000598570 SAGE1Q9NXZ1 904 aa21.4■■□□□ 1.02
USHBP1-209ENST00000598570 MYH7P12883 1935 aa21.39■■□□□ 1.02
USHBP1-209ENST00000598570 FOXN1O15353 648 aa21.39■■□□□ 1.01
USHBP1-209ENST00000598570 INHBEP58166 350 aa21.39■■□□□ 1.01
USHBP1-209ENST00000598570 DYNLL1P63167 89 aaKnown RBP21.39■■□□□ 1.01
USHBP1-209ENST00000598570 NUCB1Q02818 461 aa21.39■■□□□ 1.01
USHBP1-209ENST00000598570 TICAM2Q86XR7 235 aa21.39■■□□□ 1.01
USHBP1-209ENST00000598570 NOL10Q9BSC4 688 aaKnown RBP21.39■■□□□ 1.01
USHBP1-209ENST00000598570 CFHR5Q9BXR6 569 aa21.39■■□□□ 1.01
USHBP1-209ENST00000598570 SNCAIPQ9Y6H5 919 aa21.39■■□□□ 1.01
USHBP1-209ENST00000598570 AK9Q5TCS8 1911 aa21.39■■□□□ 1.01
USHBP1-209ENST00000598570 ZNF532Q9HCE3 1301 aa21.38■■□□□ 1.01
USHBP1-209ENST00000598570 SPDYE5A6NIY4 337 aa21.38■■□□□ 1.01
USHBP1-209ENST00000598570 GLRX3O76003 335 aaKnown RBP21.38■■□□□ 1.01
USHBP1-209ENST00000598570 MX1P20591 662 aa21.38■■□□□ 1.01
USHBP1-209ENST00000598570 MIGA2Q7L4E1 593 aa21.38■■□□□ 1.01
USHBP1-209ENST00000598570 KBTBD3Q8NAB2 608 aa21.38■■□□□ 1.01
USHBP1-209ENST00000598570 FLT1P17948 1338 aa21.37■■□□□ 1.01
USHBP1-209ENST00000598570 SIPA1L1O43166 1804 aa21.37■■□□□ 1.01
USHBP1-209ENST00000598570 ERC2O15083 957 aa21.37■■□□□ 1.01
USHBP1-209ENST00000598570 MS4A4AQ96JQ5 239 aa21.37■■□□□ 1.01
USHBP1-209ENST00000598570 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.37■■□□□ 1.01
USHBP1-209ENST00000598570 CTCFP49711 727 aaPredicted RBP21.36■■□□□ 1.01
USHBP1-209ENST00000598570 GRM1Q13255 1194 aa21.36■■□□□ 1.01
USHBP1-209ENST00000598570 ERO1BQ86YB8 467 aa21.36■■□□□ 1.01
USHBP1-209ENST00000598570 FOXP4Q8IVH2 680 aaPredicted RBP21.36■■□□□ 1.01
USHBP1-209ENST00000598570 TGFBRAP1Q8WUH2 860 aa21.36■■□□□ 1.01
USHBP1-209ENST00000598570 WRNIP1Q96S55 665 aa21.36■■□□□ 1.01
USHBP1-209ENST00000598570 OSBPL3Q9H4L5 887 aa21.36■■□□□ 1.01
USHBP1-209ENST00000598570 PRDM10Q9NQV6 1147 aa21.36■■□□□ 1.01
USHBP1-209ENST00000598570 PI4KBQ9UBF8 816 aa21.36■■□□□ 1.01
USHBP1-209ENST00000598570 HERC5Q9UII4 1024 aaKnown RBP21.36■■□□□ 1.01
USHBP1-209ENST00000598570 MANSC4A6NHS7 340 aaPredicted RBP21.35■■□□□ 1.01
USHBP1-209ENST00000598570 HSPA8P11142 646 aaKnown RBP21.35■■□□□ 1.01
USHBP1-209ENST00000598570 INPP5BP32019 993 aa21.35■■□□□ 1.01
USHBP1-209ENST00000598570 PDE1AP54750 535 aa21.35■■□□□ 1.01
USHBP1-209ENST00000598570 PICALMQ13492 652 aa21.35■■□□□ 1.01
USHBP1-209ENST00000598570 CHD1LQ86WJ1 897 aa21.35■■□□□ 1.01
USHBP1-209ENST00000598570 MIGA1Q8NAN2 632 aa21.35■■□□□ 1.01
USHBP1-209ENST00000598570 ZKSCAN4Q969J2 545 aaPredicted RBP21.35■■□□□ 1.01
USHBP1-209ENST00000598570 RNF186Q9NXI6 227 aa21.35■■□□□ 1.01
USHBP1-209ENST00000598570 TAOK2Q9UL54 1235 aa21.35■■□□□ 1.01
USHBP1-209ENST00000598570 CSADQ9Y600 493 aa21.35■■□□□ 1.01
USHBP1-209ENST00000598570 MAGEB6P1A0A0J9YX57 407 aa21.34■■□□□ 1.01
USHBP1-209ENST00000598570 CTNND1O60716 968 aaKnown RBP21.34■■□□□ 1.01
USHBP1-209ENST00000598570 PPATQ06203 517 aa21.34■■□□□ 1.01
USHBP1-209ENST00000598570 NOM1Q5C9Z4 860 aaKnown RBP21.34■■□□□ 1.01
USHBP1-209ENST00000598570 TSHZ3Q63HK5 1081 aa21.34■■□□□ 1.01
USHBP1-209ENST00000598570 ZSCAN25Q6NSZ9 544 aa21.34■■□□□ 1.01
USHBP1-209ENST00000598570 OPTNQ96CV9 577 aa21.34■■□□□ 1.01
USHBP1-209ENST00000598570 ELP3Q9H9T3 547 aa21.34■■□□□ 1.01
USHBP1-209ENST00000598570 DDX60LQ5H9U9 1706 aaKnown RBP21.34■■□□□ 1.01
USHBP1-209ENST00000598570 SREBF2Q12772 1141 aa21.33■■□□□ 1.01
USHBP1-209ENST00000598570 PPIL2Q13356 520 aa21.33■■□□□ 1.01
USHBP1-209ENST00000598570 AIDAQ96BJ3 306 aa21.33■■□□□ 1.01
USHBP1-209ENST00000598570 EHD4Q9H223 541 aa21.33■■□□□ 1.01
USHBP1-209ENST00000598570 KCNH4Q9UQ05 1017 aa21.33■■□□□ 1.01
USHBP1-209ENST00000598570 MYH1P12882 1939 aa21.33■■□□□ 1
USHBP1-209ENST00000598570 CHGBP05060 677 aa21.32■■□□□ 1
USHBP1-209ENST00000598570 ZFYP08048 801 aaPredicted RBP21.32■■□□□ 1
USHBP1-209ENST00000598570 SLFNL1Q499Z3 407 aa21.32■■□□□ 1
USHBP1-209ENST00000598570 MAPKAPK5Q8IW41 473 aa21.32■■□□□ 1
USHBP1-209ENST00000598570 CNKSR2Q8WXI2 1034 aa21.32■■□□□ 1
USHBP1-209ENST00000598570 RNF113AO15541 343 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms