RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 OSBPL5Q9H0X9 879 aaPredicted RBP24.51■■□□□ 1.51
PNKP-211ENST00000598020 TRIM6-TRIM34B2RNG4 842 aa24.5■■□□□ 1.51
PNKP-211ENST00000598020 PICALMQ13492 652 aa24.5■■□□□ 1.51
PNKP-211ENST00000598020 SH3BP5LQ7L8J4 393 aa24.5■■□□□ 1.51
PNKP-211ENST00000598020 TGFBRAP1Q8WUH2 860 aa24.5■■□□□ 1.51
PNKP-211ENST00000598020 HHIPL1Q96JK4 782 aa24.5■■□□□ 1.51
PNKP-211ENST00000598020 PUS7LQ9H0K6 701 aaKnown RBP24.5■■□□□ 1.51
PNKP-211ENST00000598020 AK9Q5TCS8 1911 aa24.49■■□□□ 1.51
PNKP-211ENST00000598020 PPP1R12BO60237 982 aaPredicted RBP24.49■■□□□ 1.51
PNKP-211ENST00000598020 MBD4O95243 580 aa24.49■■□□□ 1.51
PNKP-211ENST00000598020 ZMYM1Q5SVZ6 1142 aa24.49■■□□□ 1.51
PNKP-211ENST00000598020 LCORLQ8N3X6 602 aa24.49■■□□□ 1.51
PNKP-211ENST00000598020 OSBP2Q969R2 916 aa24.49■■□□□ 1.51
PNKP-211ENST00000598020 CRNKL1Q9BZJ0 848 aaKnown RBP24.49■■□□□ 1.51
PNKP-211ENST00000598020 FLT1P17948 1338 aa24.49■■□□□ 1.51
PNKP-211ENST00000598020 UNCXA6NJT0 531 aa24.48■■□□□ 1.51
PNKP-211ENST00000598020 RASSF10A6NK89 507 aa24.48■■□□□ 1.51
PNKP-211ENST00000598020 ARMC9Q7Z3E5 817 aa24.48■■□□□ 1.51
PNKP-211ENST00000598020 RILPL2Q969X0 211 aa24.48■■□□□ 1.51
PNKP-211ENST00000598020 AIDAQ96BJ3 306 aa24.48■■□□□ 1.51
PNKP-211ENST00000598020 DHX36Q9H2U1 1008 aaKnown RBP24.48■■□□□ 1.51
PNKP-211ENST00000598020 ARMT1Q9H993 441 aa24.48■■□□□ 1.51
PNKP-211ENST00000598020 MKRN1Q9UHC7 482 aaKnown RBP24.48■■□□□ 1.51
PNKP-211ENST00000598020 ABT1Q9ULW3 272 aaKnown RBP24.48■■□□□ 1.51
PNKP-211ENST00000598020 DDTLA6NHG4 134 aaPredicted RBP24.47■■□□□ 1.51
PNKP-211ENST00000598020 USP2O75604 605 aaPredicted RBP24.47■■□□□ 1.51
PNKP-211ENST00000598020 GSPT1P15170 499 aaKnown RBP24.47■■□□□ 1.51
PNKP-211ENST00000598020 MAP3K10Q02779 954 aa24.47■■□□□ 1.51
PNKP-211ENST00000598020 MAPKAPK5Q8IW41 473 aa24.47■■□□□ 1.51
PNKP-211ENST00000598020 STRBPQ96SI9 672 aaKnown RBP24.47■■□□□ 1.51
PNKP-211ENST00000598020 USP5P45974 858 aa24.46■■□□□ 1.51
PNKP-211ENST00000598020 HUNKP57058 714 aa24.46■■□□□ 1.51
PNKP-211ENST00000598020 HTRA3P83110 453 aa24.46■■□□□ 1.51
PNKP-211ENST00000598020 LDLRAD1Q5T700 205 aa24.46■■□□□ 1.51
PNKP-211ENST00000598020 DCAF15Q66K64 600 aa24.46■■□□□ 1.51
PNKP-211ENST00000598020 ZSCAN29Q8IWY8 852 aaPredicted RBP24.46■■□□□ 1.51
PNKP-211ENST00000598020 CSRNP1Q96S65 589 aa24.46■■□□□ 1.51
PNKP-211ENST00000598020 IREB2P48200 963 aaKnown RBP24.45■■□□□ 1.5
PNKP-211ENST00000598020 TTLL12Q14166 644 aaPredicted RBP24.45■■□□□ 1.5
PNKP-211ENST00000598020 MOB2Q70IA6 237 aa24.45■■□□□ 1.5
PNKP-211ENST00000598020 HELLSQ9NRZ9 838 aa24.45■■□□□ 1.5
PNKP-211ENST00000598020 ATP8A2Q9NTI2 1148 aa24.45■■□□□ 1.5
PNKP-211ENST00000598020 ANGEL1Q9UNK9 670 aaKnown RBP24.45■■□□□ 1.5
PNKP-211ENST00000598020 MYH1P12882 1939 aa24.44■■□□□ 1.5
PNKP-211ENST00000598020 TBC1D12O60347 775 aa24.44■■□□□ 1.5
PNKP-211ENST00000598020 SDSP20132 328 aa24.44■■□□□ 1.5
PNKP-211ENST00000598020 DEFB115Q30KQ5 88 aa24.44■■□□□ 1.5
PNKP-211ENST00000598020 PI4KBQ9UBF8 816 aa24.44■■□□□ 1.5
PNKP-211ENST00000598020 UBE2Q2LH0YL09 131 aa24.43■■□□□ 1.5
PNKP-211ENST00000598020 M0R2C6 588 aa24.43■■□□□ 1.5
PNKP-211ENST00000598020 HIP1O00291 1037 aa24.43■■□□□ 1.5
PNKP-211ENST00000598020 GPAA1O43292 621 aa24.43■■□□□ 1.5
PNKP-211ENST00000598020 PRKG1Q13976 671 aa24.43■■□□□ 1.5
PNKP-211ENST00000598020 METTL16Q86W50 562 aaKnown RBP24.43■■□□□ 1.5
PNKP-211ENST00000598020 KLRG1Q96E93 195 aa24.43■■□□□ 1.5
PNKP-211ENST00000598020 ZNF341Q9BYN7 854 aa24.43■■□□□ 1.5
PNKP-211ENST00000598020 DCP1AQ9NPI6 582 aaPredicted RBP24.43■■□□□ 1.5
PNKP-211ENST00000598020 DDX60LQ5H9U9 1706 aaKnown RBP24.42■■□□□ 1.5
PNKP-211ENST00000598020 PRKAB2O43741 272 aa24.42■■□□□ 1.5
PNKP-211ENST00000598020 GNAT2P19087 354 aa24.42■■□□□ 1.5
PNKP-211ENST00000598020 DNAJC5GQ8N7S2 189 aa24.42■■□□□ 1.5
PNKP-211ENST00000598020 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.42■■□□□ 1.5
PNKP-211ENST00000598020 SDR42E1Q8WUS8 393 aa24.42■■□□□ 1.5
PNKP-211ENST00000598020 SEC62Q99442 399 aaKnown RBP24.42■■□□□ 1.5
PNKP-211ENST00000598020 ZNF112Q9UJU3 913 aa24.42■■□□□ 1.5
PNKP-211ENST00000598020 FZD1Q9UP38 647 aa24.42■■□□□ 1.5
PNKP-211ENST00000598020 SLC4A4Q9Y6R1 1079 aa24.42■■□□□ 1.5
PNKP-211ENST00000598020 RGMBQ6NW40 437 aa24.41■■□□□ 1.5
PNKP-211ENST00000598020 GIMAP6Q6P9H5 292 aa24.41■■□□□ 1.5
PNKP-211ENST00000598020 MIGA2Q7L4E1 593 aa24.41■■□□□ 1.5
PNKP-211ENST00000598020 SKAP1Q86WV1 359 aa24.41■■□□□ 1.5
PNKP-211ENST00000598020 FOXP4Q8IVH2 680 aaPredicted RBP24.41■■□□□ 1.5
PNKP-211ENST00000598020 PALD1Q9ULE6 856 aa24.41■■□□□ 1.5
PNKP-211ENST00000598020 NAV1Q8NEY1 1877 aa24.41■■□□□ 1.5
PNKP-211ENST00000598020 MAP3K9P80192 1104 aa24.4■■□□□ 1.5
PNKP-211ENST00000598020 MCMDC2Q4G0Z9 681 aa24.4■■□□□ 1.5
PNKP-211ENST00000598020 ANKRD13AQ8IZ07 590 aa24.4■■□□□ 1.5
PNKP-211ENST00000598020 HERC5Q9UII4 1024 aaKnown RBP24.4■■□□□ 1.5
PNKP-211ENST00000598020 SIPA1L1O43166 1804 aa24.4■■□□□ 1.5
PNKP-211ENST00000598020 A0A0D9SFI3 127 aa24.39■■□□□ 1.49
PNKP-211ENST00000598020 HLA-DOAP06340 250 aa24.39■■□□□ 1.49
PNKP-211ENST00000598020 NMIQ13287 307 aaPredicted RBP24.39■■□□□ 1.49
PNKP-211ENST00000598020 TTC6Q86TZ1 520 aa24.39■■□□□ 1.49
PNKP-211ENST00000598020 FAM227BQ96M60 508 aa24.39■■□□□ 1.49
PNKP-211ENST00000598020 EHD4Q9H223 541 aa24.39■■□□□ 1.49
PNKP-211ENST00000598020 SAP30BPQ9UHR5 308 aaKnown RBP24.39■■□□□ 1.49
PNKP-211ENST00000598020 TAOK2Q9UL54 1235 aa24.39■■□□□ 1.49
PNKP-211ENST00000598020 OTOFQ9HC10 1997 aa24.38■■□□□ 1.49
PNKP-211ENST00000598020 GSG1L2A8MUP6 293 aa24.38■■□□□ 1.49
PNKP-211ENST00000598020 PHF20L1A8MW92 1017 aa24.38■■□□□ 1.49
PNKP-211ENST00000598020 PATL2C9JE40 543 aaKnown RBP24.38■■□□□ 1.49
PNKP-211ENST00000598020 ECE1P42892 770 aa24.38■■□□□ 1.49
PNKP-211ENST00000598020 BMP2KLQ5H9B9 411 aa24.38■■□□□ 1.49
PNKP-211ENST00000598020 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.38■■□□□ 1.49
PNKP-211ENST00000598020 CCDC102AQ96A19 550 aa24.38■■□□□ 1.49
PNKP-211ENST00000598020 DDRGK1Q96HY6 314 aa24.38■■□□□ 1.49
PNKP-211ENST00000598020 MCM9Q9NXL9 1143 aa24.38■■□□□ 1.49
PNKP-211ENST00000598020 ZNF157P51786 506 aaPredicted RBP24.37■■□□□ 1.49
PNKP-211ENST00000598020 WRNIP1Q96S55 665 aa24.37■■□□□ 1.49
PNKP-211ENST00000598020 DIAPH3Q9NSV4 1193 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms