RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SCYL3Q8IZE3 742 aa20.51■□□□□ 0.87
SHKBP1-215ENST00000597649 U2AF1L4Q8WU68 220 aaKnown RBP20.51■□□□□ 0.87
SHKBP1-215ENST00000597649 IDI2Q9BXS1 227 aa20.51■□□□□ 0.87
SHKBP1-215ENST00000597649 CEP126Q9P2H0 1117 aa20.51■□□□□ 0.87
SHKBP1-215ENST00000597649 AK9Q5TCS8 1911 aa20.51■□□□□ 0.87
SHKBP1-215ENST00000597649 DDTLA6NHG4 134 aaPredicted RBP20.5■□□□□ 0.87
SHKBP1-215ENST00000597649 CIAO1O76071 339 aa20.5■□□□□ 0.87
SHKBP1-215ENST00000597649 ADORA1P30542 326 aa20.5■□□□□ 0.87
SHKBP1-215ENST00000597649 UBXN2AP68543 259 aa20.5■□□□□ 0.87
SHKBP1-215ENST00000597649 GNL3LQ9NVN8 582 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-215ENST00000597649 PA2G4Q9UQ80 394 aaKnown RBP20.5■□□□□ 0.87
SHKBP1-215ENST00000597649 ADCY3O60266 1144 aa20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 ENTPD3O75355 529 aa20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 SGPL1O95470 568 aa20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 ELNP15502 786 aa20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 FLT3LGP49771 235 aa20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 FASTKD5Q7L8L6 764 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 SLAIN1Q8ND83 568 aa20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 DDX4Q9NQI0 724 aaKnown RBP20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 PICK1Q9NRD5 415 aa20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 DENND2AQ9ULE3 1009 aa20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 GAKO14976 1311 aa20.49■□□□□ 0.87
SHKBP1-215ENST00000597649 ZBTB7BO15156 539 aaPredicted RBP20.48■□□□□ 0.87
SHKBP1-215ENST00000597649 GADL1Q6ZQY3 521 aa20.48■□□□□ 0.87
SHKBP1-215ENST00000597649 HTATIP2Q9BUP3 242 aa20.48■□□□□ 0.87
SHKBP1-215ENST00000597649 FBXO3Q9UK99 471 aa20.48■□□□□ 0.87
SHKBP1-215ENST00000597649 RFX7Q2KHR2 1363 aa20.47■□□□□ 0.87
SHKBP1-215ENST00000597649 SEMA3EO15041 775 aa20.47■□□□□ 0.87
SHKBP1-215ENST00000597649 FARP2O94887 1054 aaPredicted RBP20.47■□□□□ 0.87
SHKBP1-215ENST00000597649 HNRNPUQ00839 825 aaKnown RBP eCLIP20.47■□□□□ 0.87
SHKBP1-215ENST00000597649 SLFN5Q08AF3 891 aa20.47■□□□□ 0.87
SHKBP1-215ENST00000597649 CCDC102BQ68D86 513 aa20.47■□□□□ 0.87
SHKBP1-215ENST00000597649 CCDC84Q86UT8 332 aaPredicted RBP20.47■□□□□ 0.87
SHKBP1-215ENST00000597649 E9PSI1 815 aa20.46■□□□□ 0.87
SHKBP1-215ENST00000597649 ZBTB22O15209 634 aa20.46■□□□□ 0.87
SHKBP1-215ENST00000597649 INHAP05111 366 aa20.46■□□□□ 0.87
SHKBP1-215ENST00000597649 IL15P40933 162 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-215ENST00000597649 TIMM10P62072 90 aa20.46■□□□□ 0.87
SHKBP1-215ENST00000597649 RASGRF1Q13972 1273 aa20.46■□□□□ 0.87
SHKBP1-215ENST00000597649 FAM163AQ96GL9 167 aaPredicted RBP20.46■□□□□ 0.87
SHKBP1-215ENST00000597649 SLC45A1Q9Y2W3 748 aa20.46■□□□□ 0.87
SHKBP1-215ENST00000597649 LRRFIP2Q9Y608 721 aaKnown RBP20.46■□□□□ 0.87
SHKBP1-215ENST00000597649 CTNND1O60716 968 aaKnown RBP20.45■□□□□ 0.86
SHKBP1-215ENST00000597649 UBTFL1P0CB47 393 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-215ENST00000597649 ZSCAN29Q8IWY8 852 aaPredicted RBP20.45■□□□□ 0.86
SHKBP1-215ENST00000597649 ZNF384Q8TF68 577 aa20.45■□□□□ 0.86
SHKBP1-215ENST00000597649 NR2E3Q9Y5X4 410 aa20.45■□□□□ 0.86
SHKBP1-215ENST00000597649 MYH13Q9UKX3 1938 aa20.45■□□□□ 0.86
SHKBP1-215ENST00000597649 TRIM75PA6NK02 468 aa20.44■□□□□ 0.86
SHKBP1-215ENST00000597649 TFRCP02786 760 aaKnown RBP20.44■□□□□ 0.86
SHKBP1-215ENST00000597649 PICALMQ13492 652 aa20.44■□□□□ 0.86
SHKBP1-215ENST00000597649 IRF5Q13568 498 aa20.44■□□□□ 0.86
SHKBP1-215ENST00000597649 ALDH1L2Q3SY69 923 aa20.44■□□□□ 0.86
SHKBP1-215ENST00000597649 PXYLP1Q8TE99 480 aa20.44■□□□□ 0.86
SHKBP1-215ENST00000597649 CDCA7LQ96GN5 454 aa20.44■□□□□ 0.86
SHKBP1-215ENST00000597649 DEFB118Q96PH6 123 aa20.44■□□□□ 0.86
SHKBP1-215ENST00000597649 ABCF2Q9UG63 623 aa20.44■□□□□ 0.86
SHKBP1-215ENST00000597649 MGAMO43451 1857 aa20.43■□□□□ 0.86
SHKBP1-215ENST00000597649 TNPO2O14787 897 aaKnown RBP20.43■□□□□ 0.86
SHKBP1-215ENST00000597649 BTDP43251 543 aa20.43■□□□□ 0.86
SHKBP1-215ENST00000597649 RHBDL3P58872 404 aa20.43■□□□□ 0.86
SHKBP1-215ENST00000597649 TREML2Q5T2D2 321 aa20.43■□□□□ 0.86
SHKBP1-215ENST00000597649 ANKRD13CQ8N6S4 541 aa20.43■□□□□ 0.86
SHKBP1-215ENST00000597649 COPRSQ9NQ92 184 aa20.43■□□□□ 0.86
SHKBP1-215ENST00000597649 PAK6Q9NQU5 681 aaPredicted RBP20.43■□□□□ 0.86
SHKBP1-215ENST00000597649 DOCK3Q8IZD9 2030 aa20.43■□□□□ 0.86
SHKBP1-215ENST00000597649 DZIP1Q86YF9 867 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-215ENST00000597649 ZGPATQ8N5A5 531 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-215ENST00000597649 SMC4Q9NTJ3 1288 aa20.42■□□□□ 0.86
SHKBP1-215ENST00000597649 NOB1Q9ULX3 412 aaKnown RBP20.42■□□□□ 0.86
SHKBP1-215ENST00000597649 AGTPBP1Q9UPW5 1226 aa20.42■□□□□ 0.86
SHKBP1-215ENST00000597649 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.42■□□□□ 0.86
SHKBP1-215ENST00000597649 MYH2Q9UKX2 1941 aa20.42■□□□□ 0.86
SHKBP1-215ENST00000597649 FAM196BA6NMK8 535 aa20.41■□□□□ 0.86
SHKBP1-215ENST00000597649 SOX1O00570 391 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-215ENST00000597649 MECOMQ03112 1051 aa20.41■□□□□ 0.86
SHKBP1-215ENST00000597649 SMCR8Q8TEV9 937 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-215ENST00000597649 CRISPLD2Q9H0B8 497 aa20.41■□□□□ 0.86
SHKBP1-215ENST00000597649 MROH7-TTC4A0A0A0MT08 1334 aa20.4■□□□□ 0.86
SHKBP1-215ENST00000597649 GPR75-ASB3A0A0A6YYF3 556 aa20.4■□□□□ 0.86
SHKBP1-215ENST00000597649 TBC1D12O60347 775 aa20.4■□□□□ 0.86
SHKBP1-215ENST00000597649 EVI5O60447 810 aa20.4■□□□□ 0.86
SHKBP1-215ENST00000597649 RRP1BQ14684 758 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-215ENST00000597649 XAGE2Q96GT9 111 aa20.4■□□□□ 0.86
SHKBP1-215ENST00000597649 PAWRQ96IZ0 340 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-215ENST00000597649 STAP2Q9UGK3 403 aa20.4■□□□□ 0.86
SHKBP1-215ENST00000597649 TAOK2Q9UL54 1235 aa20.4■□□□□ 0.86
SHKBP1-215ENST00000597649 PHIPQ8WWQ0 1821 aa20.39■□□□□ 0.86
SHKBP1-215ENST00000597649 PDS5AQ29RF7 1337 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-215ENST00000597649 SLF2Q8IX21 1173 aa20.39■□□□□ 0.85
SHKBP1-215ENST00000597649 TRMT2AQ8IZ69 625 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-215ENST00000597649 DIS3LQ8TF46 1054 aaKnown RBP20.39■□□□□ 0.85
SHKBP1-215ENST00000597649 MEIS3Q99687 375 aa20.39■□□□□ 0.85
SHKBP1-215ENST00000597649 DOCK2Q92608 1830 aa20.39■□□□□ 0.85
SHKBP1-215ENST00000597649 PTPRFP10586 1907 aa20.38■□□□□ 0.85
SHKBP1-215ENST00000597649 TFCP2Q12800 502 aa20.38■□□□□ 0.85
SHKBP1-215ENST00000597649 SPP2Q13103 211 aa20.38■□□□□ 0.85
SHKBP1-215ENST00000597649 SPTY2D1Q68D10 685 aaPredicted RBP20.38■□□□□ 0.85
SHKBP1-215ENST00000597649 COA7Q96BR5 231 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms