RNA–Protein interactions for RNA: ENST00000597369.1

IRF3-218, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-218ENST00000597369 CHMP4AQ9BY43 222 aa16.55■□□□□ 0.24
IRF3-218ENST00000597369 MBIPQ9NS73 344 aa16.55■□□□□ 0.24
IRF3-218ENST00000597369 ZHX2Q9Y6X8 837 aa16.55■□□□□ 0.24
IRF3-218ENST00000597369 NEUROD2Q15784 382 aa16.54■□□□□ 0.24
IRF3-218ENST00000597369 GADL1Q6ZQY3 521 aa16.54■□□□□ 0.24
IRF3-218ENST00000597369 ADAMTS19Q8TE59 1207 aa16.54■□□□□ 0.24
IRF3-218ENST00000597369 TBC1D22AQ8WUA7 517 aa16.54■□□□□ 0.24
IRF3-218ENST00000597369 ASB2Q96Q27 587 aa16.54■□□□□ 0.24
IRF3-218ENST00000597369 PRKAG2Q9UGJ0 569 aa16.54■□□□□ 0.24
IRF3-218ENST00000597369 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
IRF3-218ENST00000597369 PRKAR2AP13861 404 aaKnown RBP16.53■□□□□ 0.24
IRF3-218ENST00000597369 IFIT5Q13325 482 aaKnown RBP16.53■□□□□ 0.24
IRF3-218ENST00000597369 UBE4AQ14139 1066 aa16.53■□□□□ 0.24
IRF3-218ENST00000597369 GCKRQ14397 625 aa16.53■□□□□ 0.24
IRF3-218ENST00000597369 C9orf50Q5SZB4 431 aa16.53■□□□□ 0.24
IRF3-218ENST00000597369 XIRP2A4UGR9 3374 aa16.53■□□□□ 0.24
IRF3-218ENST00000597369 XRCC5P13010 732 aaKnown RBP16.52■□□□□ 0.24
IRF3-218ENST00000597369 PTPRAP18433 802 aa16.52■□□□□ 0.24
IRF3-218ENST00000597369 GYG1P46976 350 aa16.52■□□□□ 0.24
IRF3-218ENST00000597369 HHIPL2Q6UWX4 724 aa16.52■□□□□ 0.24
IRF3-218ENST00000597369 SNX27Q96L92 541 aa16.52■□□□□ 0.24
IRF3-218ENST00000597369 UHRF1Q96T88 793 aaPredicted RBP16.52■□□□□ 0.24
IRF3-218ENST00000597369 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
IRF3-218ENST00000597369 AGTPBP1Q9UPW5 1226 aa16.52■□□□□ 0.24
IRF3-218ENST00000597369 FRMPD3Q5JV73 1810 aa16.52■□□□□ 0.23
IRF3-218ENST00000597369 PHF20L1A8MW92 1017 aa16.51■□□□□ 0.23
IRF3-218ENST00000597369 ZNF853P0CG23 659 aa16.51■□□□□ 0.23
IRF3-218ENST00000597369 GCLCP48506 637 aaPredicted RBP16.51■□□□□ 0.23
IRF3-218ENST00000597369 CCDC30Q5VVM6 783 aa16.51■□□□□ 0.23
IRF3-218ENST00000597369 TRMT44Q8IYL2 757 aaKnown RBP16.51■□□□□ 0.23
IRF3-218ENST00000597369 SCYL3Q8IZE3 742 aa16.51■□□□□ 0.23
IRF3-218ENST00000597369 SUGT1Q9Y2Z0 365 aa16.51■□□□□ 0.23
IRF3-218ENST00000597369 HCN4Q9Y3Q4 1203 aa16.51■□□□□ 0.23
IRF3-218ENST00000597369 ELL2O00472 640 aaPredicted RBP16.5■□□□□ 0.23
IRF3-218ENST00000597369 PLIN1O60240 522 aa16.5■□□□□ 0.23
IRF3-218ENST00000597369 GRIN2CQ14957 1233 aa16.5■□□□□ 0.23
IRF3-218ENST00000597369 SENP6Q9GZR1 1112 aaPredicted RBP16.5■□□□□ 0.23
IRF3-218ENST00000597369 PICK1Q9NRD5 415 aa16.5■□□□□ 0.23
IRF3-218ENST00000597369 MAST3O60307 1309 aa16.49■□□□□ 0.23
IRF3-218ENST00000597369 MRPS5P82675 430 aaKnown RBP16.49■□□□□ 0.23
IRF3-218ENST00000597369 CACNB2Q08289 660 aaPredicted RBP16.49■□□□□ 0.23
IRF3-218ENST00000597369 LDHAL6AQ6ZMR3 332 aa16.49■□□□□ 0.23
IRF3-218ENST00000597369 FBXO33Q7Z6M2 555 aa16.49■□□□□ 0.23
IRF3-218ENST00000597369 FOXO4P98177 505 aa16.48■□□□□ 0.23
IRF3-218ENST00000597369 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
IRF3-218ENST00000597369 THEGQ9P2T0 379 aa16.48■□□□□ 0.23
IRF3-218ENST00000597369 RLFQ13129 1914 aa16.48■□□□□ 0.23
IRF3-218ENST00000597369 ANP32CO43423 234 aa16.47■□□□□ 0.23
IRF3-218ENST00000597369 CYP2B6P20813 491 aa16.47■□□□□ 0.23
IRF3-218ENST00000597369 MAP3K10Q02779 954 aa16.47■□□□□ 0.23
IRF3-218ENST00000597369 TREML2Q5T2D2 321 aa16.47■□□□□ 0.23
IRF3-218ENST00000597369 PROCA1Q8NCQ7 364 aaPredicted RBP16.47■□□□□ 0.23
IRF3-218ENST00000597369 TCF20Q9UGU0 1960 aaKnown RBP16.47■□□□□ 0.23
IRF3-218ENST00000597369 ATRNL1Q5VV63 1379 aa16.47■□□□□ 0.23
IRF3-218ENST00000597369 DOCK1Q14185 1865 aa16.46■□□□□ 0.23
IRF3-218ENST00000597369 CCND3P30281 292 aaPredicted RBP16.46■□□□□ 0.23
IRF3-218ENST00000597369 TCP10Q12799 353 aa16.46■□□□□ 0.23
IRF3-218ENST00000597369 AKNAD1Q5T1N1 836 aa16.46■□□□□ 0.23
IRF3-218ENST00000597369 NUDT12Q9BQG2 462 aa16.46■□□□□ 0.23
IRF3-218ENST00000597369 LRFN3Q9BTN0 628 aa16.46■□□□□ 0.23
IRF3-218ENST00000597369 MYH16Q9H6N6 1097 aa16.46■□□□□ 0.23
IRF3-218ENST00000597369 CNNM1Q9NRU3 951 aa16.46■□□□□ 0.23
IRF3-218ENST00000597369 DOCK2Q92608 1830 aa16.45■□□□□ 0.22
IRF3-218ENST00000597369 RTP1P59025 263 aa16.45■□□□□ 0.22
IRF3-218ENST00000597369 C8orf58Q8NAV2 365 aa16.45■□□□□ 0.22
IRF3-218ENST00000597369 SOCS4Q8WXH5 440 aa16.45■□□□□ 0.22
IRF3-218ENST00000597369 BADQ92934 168 aa16.45■□□□□ 0.22
IRF3-218ENST00000597369 MORF4L1Q9UBU8 362 aa16.45■□□□□ 0.22
IRF3-218ENST00000597369 LOC285556D6RIA3 1793 aa16.45■□□□□ 0.22
IRF3-218ENST00000597369 TRIM75PA6NK02 468 aa16.44■□□□□ 0.22
IRF3-218ENST00000597369 CTNND1O60716 968 aaKnown RBP16.44■□□□□ 0.22
IRF3-218ENST00000597369 ZKSCAN1P17029 563 aaPredicted RBP16.44■□□□□ 0.22
IRF3-218ENST00000597369 ATN1P54259 1190 aaPredicted RBP16.44■□□□□ 0.22
IRF3-218ENST00000597369 NFIAQ12857 509 aa16.44■□□□□ 0.22
IRF3-218ENST00000597369 CHAF1AQ13111 956 aaPredicted RBP16.44■□□□□ 0.22
IRF3-218ENST00000597369 PABPC4Q13310 644 aaKnown RBP eCLIP16.44■□□□□ 0.22
IRF3-218ENST00000597369 CDC42EP5Q6NZY7 148 aa16.44■□□□□ 0.22
IRF3-218ENST00000597369 VPS37DQ86XT2 251 aa16.44■□□□□ 0.22
IRF3-218ENST00000597369 USP6NLQ92738 828 aa16.44■□□□□ 0.22
IRF3-218ENST00000597369 ZNF594Q96JF6 807 aaPredicted RBP16.44■□□□□ 0.22
IRF3-218ENST00000597369 IFT57Q9NWB7 429 aa16.44■□□□□ 0.22
IRF3-218ENST00000597369 FAM198AQ9UFP1 575 aa16.44■□□□□ 0.22
IRF3-218ENST00000597369 IQSEC3Q9UPP2 1182 aaPredicted RBP16.44■□□□□ 0.22
IRF3-218ENST00000597369 GNAI1P63096 354 aa16.43■□□□□ 0.22
IRF3-218ENST00000597369 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
IRF3-218ENST00000597369 CCDC57Q2TAC2 916 aa16.43■□□□□ 0.22
IRF3-218ENST00000597369 LINS1Q8NG48 757 aa16.43■□□□□ 0.22
IRF3-218ENST00000597369 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
IRF3-218ENST00000597369 ZNF576Q9H609 170 aa16.43■□□□□ 0.22
IRF3-218ENST00000597369 CHMP3Q9Y3E7 222 aa16.43■□□□□ 0.22
IRF3-218ENST00000597369 CHD9Q3L8U1 2897 aa16.43■□□□□ 0.22
IRF3-218ENST00000597369 REV3LO60673 3130 aa16.42■□□□□ 0.22
IRF3-218ENST00000597369 DNM1LO00429 736 aa16.42■□□□□ 0.22
IRF3-218ENST00000597369 FRAT2O75474 233 aaPredicted RBP16.42■□□□□ 0.22
IRF3-218ENST00000597369 ALYREFQ86V81 257 aaKnown RBP16.42■□□□□ 0.22
IRF3-218ENST00000597369 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
IRF3-218ENST00000597369 IL27Q8NEV9 243 aa16.42■□□□□ 0.22
IRF3-218ENST00000597369 GAS2L1Q99501 681 aaPredicted RBP16.42■□□□□ 0.22
IRF3-218ENST00000597369 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.41■□□□□ 0.22
IRF3-218ENST00000597369 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms