RNA–Protein interactions for RNA: ENST00000596436.5

USHBP1-206, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 487 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-206ENST00000596436 TCP10Q12799 353 aa19.68■□□□□ 0.74
USHBP1-206ENST00000596436 SLC4A8Q2Y0W8 1093 aa19.68■□□□□ 0.74
USHBP1-206ENST00000596436 CEP85Q6P2H3 762 aa19.68■□□□□ 0.74
USHBP1-206ENST00000596436 ZBTB40Q9NUA8 1239 aa19.68■□□□□ 0.74
USHBP1-206ENST00000596436 SRRDQ9UH36 339 aa19.68■□□□□ 0.74
USHBP1-206ENST00000596436 CEP290O15078 2479 aa19.68■□□□□ 0.74
USHBP1-206ENST00000596436 GAKO14976 1311 aa19.68■□□□□ 0.74
USHBP1-206ENST00000596436 AK9Q5TCS8 1911 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 MYH2Q9UKX2 1941 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 PHF20L1A8MW92 1017 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 FXR1P51114 621 aaKnown RBP eCLIP19.67■□□□□ 0.74
USHBP1-206ENST00000596436 ZFPM1Q8IX07 1006 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 SSH3Q8TE77 659 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 SHISA4Q96DD7 197 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 IDI2Q9BXS1 227 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 GNL3LQ9NVN8 582 aaKnown RBP19.67■□□□□ 0.74
USHBP1-206ENST00000596436 CEP126Q9P2H0 1117 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 CPA4Q9UI42 421 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 DENND2AQ9ULE3 1009 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 PDS5AQ29RF7 1337 aaKnown RBP19.67■□□□□ 0.74
USHBP1-206ENST00000596436 RANBP2P49792 3224 aaKnown RBP19.67■□□□□ 0.74
USHBP1-206ENST00000596436 MGAMO43451 1857 aa19.67■□□□□ 0.74
USHBP1-206ENST00000596436 PTPRFP10586 1907 aa19.66■□□□□ 0.74
USHBP1-206ENST00000596436 CXCL11O14625 94 aa19.66■□□□□ 0.74
USHBP1-206ENST00000596436 ENTPD3O75355 529 aa19.66■□□□□ 0.74
USHBP1-206ENST00000596436 BCRP11274 1271 aa19.66■□□□□ 0.74
USHBP1-206ENST00000596436 OSBPP22059 807 aa19.66■□□□□ 0.74
USHBP1-206ENST00000596436 IL15P40933 162 aaPredicted RBP19.66■□□□□ 0.74
USHBP1-206ENST00000596436 PSMC4P43686 418 aa19.66■□□□□ 0.74
USHBP1-206ENST00000596436 PHKA1P46020 1223 aa19.66■□□□□ 0.74
USHBP1-206ENST00000596436 GPAT2Q6NUI2 795 aa19.66■□□□□ 0.74
USHBP1-206ENST00000596436 USP40Q9NVE5 1235 aa19.66■□□□□ 0.74
USHBP1-206ENST00000596436 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.66■□□□□ 0.74
USHBP1-206ENST00000596436 PHIPQ8WWQ0 1821 aa19.66■□□□□ 0.74
USHBP1-206ENST00000596436 FAM163AQ96GL9 167 aaPredicted RBP19.65■□□□□ 0.74
USHBP1-206ENST00000596436 MTFR1Q15390 333 aa19.64■□□□□ 0.73
USHBP1-206ENST00000596436 UBE2Q1Q7Z7E8 422 aa19.64■□□□□ 0.73
USHBP1-206ENST00000596436 PARK7Q99497 189 aaKnown RBP19.64■□□□□ 0.73
USHBP1-206ENST00000596436 DOCK1Q14185 1865 aa19.64■□□□□ 0.73
USHBP1-206ENST00000596436 SZT2Q5T011 3432 aa19.63■□□□□ 0.73
USHBP1-206ENST00000596436 A0A0G2JLL6 359 aaPredicted RBP19.63■□□□□ 0.73
USHBP1-206ENST00000596436 MYCP01106 439 aaPredicted RBP19.63■□□□□ 0.73
USHBP1-206ENST00000596436 HOXD10P28358 340 aa19.63■□□□□ 0.73
USHBP1-206ENST00000596436 RGS3P49796 1198 aa19.63■□□□□ 0.73
USHBP1-206ENST00000596436 TFCP2Q12800 502 aa19.63■□□□□ 0.73
USHBP1-206ENST00000596436 CCDC102BQ68D86 513 aa19.63■□□□□ 0.73
USHBP1-206ENST00000596436 SH3BP5LQ7L8J4 393 aa19.63■□□□□ 0.73
USHBP1-206ENST00000596436 PRRT2Q7Z6L0 340 aaPredicted RBP19.63■□□□□ 0.73
USHBP1-206ENST00000596436 SCYL3Q8IZE3 742 aa19.63■□□□□ 0.73
USHBP1-206ENST00000596436 ZGPATQ8N5A5 531 aaKnown RBP19.63■□□□□ 0.73
USHBP1-206ENST00000596436 COLQQ9Y215 455 aaPredicted RBP19.63■□□□□ 0.73
USHBP1-206ENST00000596436 MYPNQ86TC9 1320 aa19.62■□□□□ 0.73
USHBP1-206ENST00000596436 ADORA1P30542 326 aa19.62■□□□□ 0.73
USHBP1-206ENST00000596436 GRK4P32298 578 aa19.62■□□□□ 0.73
USHBP1-206ENST00000596436 RASGRF1Q13972 1273 aa19.62■□□□□ 0.73
USHBP1-206ENST00000596436 SIRT2Q8IXJ6 389 aa19.62■□□□□ 0.73
USHBP1-206ENST00000596436 SLC45A1Q9Y2W3 748 aa19.62■□□□□ 0.73
USHBP1-206ENST00000596436 AFG3L2Q9Y4W6 797 aa19.62■□□□□ 0.73
USHBP1-206ENST00000596436 H0YGN5 161 aa19.61■□□□□ 0.73
USHBP1-206ENST00000596436 FMNL1O95466 1100 aaPredicted RBP19.61■□□□□ 0.73
USHBP1-206ENST00000596436 PTPRAP18433 802 aa19.61■□□□□ 0.73
USHBP1-206ENST00000596436 GJA8P48165 433 aa19.61■□□□□ 0.73
USHBP1-206ENST00000596436 SURF6O75683 361 aaKnown RBP19.6■□□□□ 0.73
USHBP1-206ENST00000596436 GJB1P08034 283 aa19.6■□□□□ 0.73
USHBP1-206ENST00000596436 CYP2C8P10632 490 aa19.6■□□□□ 0.73
USHBP1-206ENST00000596436 FASTKD5Q7L8L6 764 aaKnown RBP19.6■□□□□ 0.73
USHBP1-206ENST00000596436 NKX2-3Q8TAU0 364 aa19.6■□□□□ 0.73
USHBP1-206ENST00000596436 RAET1EQ8TD07 263 aa19.6■□□□□ 0.73
USHBP1-206ENST00000596436 DDX4Q9NQI0 724 aaKnown RBP19.6■□□□□ 0.73
USHBP1-206ENST00000596436 NOP58Q9Y2X3 529 aaKnown RBP19.6■□□□□ 0.73
USHBP1-206ENST00000596436 DDTLA6NHG4 134 aaPredicted RBP19.59■□□□□ 0.73
USHBP1-206ENST00000596436 NPM3O75607 178 aaKnown RBP19.59■□□□□ 0.73
USHBP1-206ENST00000596436 FCGRTP55899 365 aa19.59■□□□□ 0.73
USHBP1-206ENST00000596436 PRKCZQ05513 592 aa19.59■□□□□ 0.73
USHBP1-206ENST00000596436 G3BP1Q13283 466 aaKnown RBP eCLIP19.59■□□□□ 0.73
USHBP1-206ENST00000596436 ZNF384Q8TF68 577 aa19.59■□□□□ 0.73
USHBP1-206ENST00000596436 CHMP4BQ9H444 224 aaKnown RBP19.59■□□□□ 0.73
USHBP1-206ENST00000596436 ZHX2Q9Y6X8 837 aa19.59■□□□□ 0.73
USHBP1-206ENST00000596436 TRIOBPQ9H2D6 2365 aa19.58■□□□□ 0.73
USHBP1-206ENST00000596436 MROH7-TTC4A0A0A0MT08 1334 aa19.58■□□□□ 0.73
USHBP1-206ENST00000596436 CTNND1O60716 968 aaKnown RBP19.58■□□□□ 0.72
USHBP1-206ENST00000596436 CCL5P13501 91 aa19.58■□□□□ 0.72
USHBP1-206ENST00000596436 TIMM10P62072 90 aa19.58■□□□□ 0.72
USHBP1-206ENST00000596436 SLF2Q8IX21 1173 aa19.58■□□□□ 0.72
USHBP1-206ENST00000596436 RPAP2Q8IXW5 612 aaPredicted RBP19.58■□□□□ 0.72
USHBP1-206ENST00000596436 CRBNQ96SW2 442 aa19.58■□□□□ 0.72
USHBP1-206ENST00000596436 PICK1Q9NRD5 415 aa19.58■□□□□ 0.72
USHBP1-206ENST00000596436 COL2A1P02458 1487 aaPredicted RBP19.58■□□□□ 0.72
USHBP1-206ENST00000596436 LOC285556D6RIA3 1793 aa19.57■□□□□ 0.72
USHBP1-206ENST00000596436 GPR75-ASB3A0A0A6YYF3 556 aa19.57■□□□□ 0.72
USHBP1-206ENST00000596436 A0A1B0GUL7 405 aa19.57■□□□□ 0.72
USHBP1-206ENST00000596436 ECM2O94769 699 aaPredicted RBP19.57■□□□□ 0.72
USHBP1-206ENST00000596436 RHBDL3P58872 404 aa19.57■□□□□ 0.72
USHBP1-206ENST00000596436 DZIP1Q86YF9 867 aaKnown RBP19.57■□□□□ 0.72
USHBP1-206ENST00000596436 SLAIN1Q8ND83 568 aa19.57■□□□□ 0.72
USHBP1-206ENST00000596436 GABRQQ9UN88 632 aa19.57■□□□□ 0.72
USHBP1-206ENST00000596436 EXOC6BQ9Y2D4 811 aa19.57■□□□□ 0.72
USHBP1-206ENST00000596436 TBC1D12O60347 775 aa19.56■□□□□ 0.72
USHBP1-206ENST00000596436 SLURP2P0DP57 97 aa19.56■□□□□ 0.72
USHBP1-206ENST00000596436 BTDP43251 543 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms