RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 TSHZ3Q63HK5 1081 aa22.11■■□□□ 1.13
ZNF558-204ENST00000596172 SH3BP5LQ7L8J4 393 aa22.11■■□□□ 1.13
ZNF558-204ENST00000596172 RASAL3Q86YV0 1011 aa22.11■■□□□ 1.13
ZNF558-204ENST00000596172 ANKRD13AQ8IZ07 590 aa22.11■■□□□ 1.13
ZNF558-204ENST00000596172 ATRNL1Q5VV63 1379 aa22.11■■□□□ 1.13
ZNF558-204ENST00000596172 AOC2O75106 756 aa22.1■■□□□ 1.13
ZNF558-204ENST00000596172 ADD2P35612 726 aa22.1■■□□□ 1.13
ZNF558-204ENST00000596172 MAP3K9P80192 1104 aa22.1■■□□□ 1.13
ZNF558-204ENST00000596172 MAP2K1Q02750 393 aaPredicted RBP22.1■■□□□ 1.13
ZNF558-204ENST00000596172 PICALMQ13492 652 aa22.1■■□□□ 1.13
ZNF558-204ENST00000596172 UBE3CQ15386 1083 aa22.1■■□□□ 1.13
ZNF558-204ENST00000596172 ZSCAN25Q6NSZ9 544 aa22.1■■□□□ 1.13
ZNF558-204ENST00000596172 CHD1LQ86WJ1 897 aa22.1■■□□□ 1.13
ZNF558-204ENST00000596172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.1■■□□□ 1.13
ZNF558-204ENST00000596172 SLC10A4Q96EP9 437 aa22.1■■□□□ 1.13
ZNF558-204ENST00000596172 DOCK2Q92608 1830 aa22.1■■□□□ 1.13
ZNF558-204ENST00000596172 COL2A1P02458 1487 aaPredicted RBP22.09■■□□□ 1.13
ZNF558-204ENST00000596172 ZNF532Q9HCE3 1301 aa22.09■■□□□ 1.13
ZNF558-204ENST00000596172 DYNLL1P63167 89 aaKnown RBP22.09■■□□□ 1.13
ZNF558-204ENST00000596172 REM2Q8IYK8 340 aaPredicted RBP22.09■■□□□ 1.13
ZNF558-204ENST00000596172 KBTBD3Q8NAB2 608 aa22.09■■□□□ 1.13
ZNF558-204ENST00000596172 MIGA1Q8NAN2 632 aa22.09■■□□□ 1.13
ZNF558-204ENST00000596172 CSRNP1Q96S65 589 aa22.09■■□□□ 1.13
ZNF558-204ENST00000596172 RIOK1Q9BRS2 568 aaKnown RBP22.09■■□□□ 1.13
ZNF558-204ENST00000596172 ZNF341Q9BYN7 854 aa22.09■■□□□ 1.13
ZNF558-204ENST00000596172 LNPKQ9C0E8 428 aa22.09■■□□□ 1.13
ZNF558-204ENST00000596172 OSBPL5Q9H0X9 879 aaPredicted RBP22.09■■□□□ 1.13
ZNF558-204ENST00000596172 WBP1LQ9NX94 342 aa22.09■■□□□ 1.13
ZNF558-204ENST00000596172 ZNF112Q9UJU3 913 aa22.09■■□□□ 1.13
ZNF558-204ENST00000596172 DDTLA6NHG4 134 aaPredicted RBP22.08■■□□□ 1.13
ZNF558-204ENST00000596172 PDE1AP54750 535 aa22.08■■□□□ 1.13
ZNF558-204ENST00000596172 B4GALNT3Q6L9W6 998 aa22.08■■□□□ 1.13
ZNF558-204ENST00000596172 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.08■■□□□ 1.13
ZNF558-204ENST00000596172 ZSCAN29Q8IWY8 852 aaPredicted RBP22.08■■□□□ 1.13
ZNF558-204ENST00000596172 MYO5AQ9Y4I1 1855 aaKnown RBP22.07■■□□□ 1.12
ZNF558-204ENST00000596172 THSD7BQ9C0I4 1608 aa22.07■■□□□ 1.12
ZNF558-204ENST00000596172 MAGEB6P1A0A0J9YX57 407 aa22.07■■□□□ 1.12
ZNF558-204ENST00000596172 TBC1D12O60347 775 aa22.07■■□□□ 1.12
ZNF558-204ENST00000596172 MIGA2Q7L4E1 593 aa22.07■■□□□ 1.12
ZNF558-204ENST00000596172 TGFBRAP1Q8WUH2 860 aa22.07■■□□□ 1.12
ZNF558-204ENST00000596172 CLMNQ96JQ2 1002 aa22.07■■□□□ 1.12
ZNF558-204ENST00000596172 DHX36Q9H2U1 1008 aaKnown RBP22.07■■□□□ 1.12
ZNF558-204ENST00000596172 KIF23Q02241 960 aaPredicted RBP22.06■■□□□ 1.12
ZNF558-204ENST00000596172 SPRYD7Q5W111 196 aa22.06■■□□□ 1.12
ZNF558-204ENST00000596172 ZIC5Q96T25 663 aa22.06■■□□□ 1.12
ZNF558-204ENST00000596172 CSADQ9Y600 493 aa22.06■■□□□ 1.12
ZNF558-204ENST00000596172 FLT1P17948 1338 aa22.06■■□□□ 1.12
ZNF558-204ENST00000596172 ZFYP08048 801 aaPredicted RBP22.05■■□□□ 1.12
ZNF558-204ENST00000596172 ZBTB48P10074 688 aaPredicted RBP22.05■■□□□ 1.12
ZNF558-204ENST00000596172 LRRFIP1Q32MZ4 808 aaKnown RBP22.05■■□□□ 1.12
ZNF558-204ENST00000596172 WRNIP1Q96S55 665 aa22.05■■□□□ 1.12
ZNF558-204ENST00000596172 VGLL4Q14135 290 aa22.04■■□□□ 1.12
ZNF558-204ENST00000596172 MAPKAPK5Q8IW41 473 aa22.04■■□□□ 1.12
ZNF558-204ENST00000596172 OSBPL3Q9H4L5 887 aa22.04■■□□□ 1.12
ZNF558-204ENST00000596172 PI4KBQ9UBF8 816 aa22.04■■□□□ 1.12
ZNF558-204ENST00000596172 PHF20L1A8MW92 1017 aa22.03■■□□□ 1.12
ZNF558-204ENST00000596172 HSPA1AP0DMV8 641 aaKnown RBP22.03■■□□□ 1.12
ZNF558-204ENST00000596172 HSPA1BP0DMV9 641 aaKnown RBP22.03■■□□□ 1.12
ZNF558-204ENST00000596172 METTL16Q86W50 562 aaKnown RBP22.03■■□□□ 1.12
ZNF558-204ENST00000596172 TICAM2Q86XR7 235 aa22.03■■□□□ 1.12
ZNF558-204ENST00000596172 WNK4Q96J92 1243 aa22.03■■□□□ 1.12
ZNF558-204ENST00000596172 CRNKL1Q9BZJ0 848 aaKnown RBP22.03■■□□□ 1.12
ZNF558-204ENST00000596172 RNF113AO15541 343 aaKnown RBP22.02■■□□□ 1.12
ZNF558-204ENST00000596172 USP5P45974 858 aa22.02■■□□□ 1.12
ZNF558-204ENST00000596172 NOL9Q5SY16 702 aaKnown RBP22.02■■□□□ 1.12
ZNF558-204ENST00000596172 FOXP4Q8IVH2 680 aaPredicted RBP22.02■■□□□ 1.12
ZNF558-204ENST00000596172 PLEKHM2Q8IWE5 1019 aa22.02■■□□□ 1.12
ZNF558-204ENST00000596172 ZKSCAN4Q969J2 545 aaPredicted RBP22.02■■□□□ 1.12
ZNF558-204ENST00000596172 ELP3Q9H9T3 547 aa22.02■■□□□ 1.12
ZNF558-204ENST00000596172 HERC5Q9UII4 1024 aaKnown RBP22.02■■□□□ 1.12
ZNF558-204ENST00000596172 SNCAIPQ9Y6H5 919 aa22.02■■□□□ 1.12
ZNF558-204ENST00000596172 CA12O43570 354 aa22.01■■□□□ 1.11
ZNF558-204ENST00000596172 TM4SF4P48230 202 aa22.01■■□□□ 1.11
ZNF558-204ENST00000596172 INHBEP58166 350 aa22.01■■□□□ 1.11
ZNF558-204ENST00000596172 SLFNL1Q499Z3 407 aa22.01■■□□□ 1.11
ZNF558-204ENST00000596172 ERO1BQ86YB8 467 aa22.01■■□□□ 1.11
ZNF558-204ENST00000596172 LCORLQ8N3X6 602 aa22.01■■□□□ 1.11
ZNF558-204ENST00000596172 AIDAQ96BJ3 306 aa22.01■■□□□ 1.11
ZNF558-204ENST00000596172 EVI5LQ96CN4 794 aa22.01■■□□□ 1.11
ZNF558-204ENST00000596172 BEGAINQ9BUH8 593 aa22.01■■□□□ 1.11
ZNF558-204ENST00000596172 SPDYE5A6NIY4 337 aa22■■□□□ 1.11
ZNF558-204ENST00000596172 CHGBP05060 677 aa22■■□□□ 1.11
ZNF558-204ENST00000596172 CENPBP07199 599 aaPredicted RBP22■■□□□ 1.11
ZNF558-204ENST00000596172 INPP5BP32019 993 aa22■■□□□ 1.11
ZNF558-204ENST00000596172 APPBP2Q92624 585 aa22■■□□□ 1.11
ZNF558-204ENST00000596172 OPTNQ96CV9 577 aa22■■□□□ 1.11
ZNF558-204ENST00000596172 PUS7LQ9H0K6 701 aaKnown RBP22■■□□□ 1.11
ZNF558-204ENST00000596172 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22■■□□□ 1.11
ZNF558-204ENST00000596172 PALD1Q9ULE6 856 aa22■■□□□ 1.11
ZNF558-204ENST00000596172 MANSC4A6NHS7 340 aaPredicted RBP21.99■■□□□ 1.11
ZNF558-204ENST00000596172 CTNND1O60716 968 aaKnown RBP21.99■■□□□ 1.11
ZNF558-204ENST00000596172 MBD4O95243 580 aa21.99■■□□□ 1.11
ZNF558-204ENST00000596172 GJA5P36382 358 aa21.99■■□□□ 1.11
ZNF558-204ENST00000596172 SREBF2Q12772 1141 aa21.99■■□□□ 1.11
ZNF558-204ENST00000596172 ARMT1Q9H993 441 aa21.99■■□□□ 1.11
ZNF558-204ENST00000596172 ATP8A2Q9NTI2 1148 aa21.99■■□□□ 1.11
ZNF558-204ENST00000596172 HLA-DOAP06340 250 aa21.98■■□□□ 1.11
ZNF558-204ENST00000596172 PPATQ06203 517 aa21.98■■□□□ 1.11
ZNF558-204ENST00000596172 TTC6Q86TZ1 520 aa21.98■■□□□ 1.11
ZNF558-204ENST00000596172 OSBP2Q969R2 916 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms