RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 SIK1P57059 783 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 VPS37DQ86XT2 251 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 CCDC82Q8N4S0 544 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 ALG1Q9BT22 464 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 ARMT1Q9H993 441 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 UTRNP46939 3433 aa17.7■□□□□ 0.42
ZNF541-205ENST00000595558 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.7■□□□□ 0.42
ZNF541-205ENST00000595558 TMEM232C9JQI7 657 aa17.69■□□□□ 0.42
ZNF541-205ENST00000595558 SLFN14P0C7P3 912 aa17.69■□□□□ 0.42
ZNF541-205ENST00000595558 EIF5P55010 431 aaKnown RBP17.69■□□□□ 0.42
ZNF541-205ENST00000595558 SLC39A14Q15043 492 aa17.69■□□□□ 0.42
ZNF541-205ENST00000595558 ZNF771Q7L3S4 317 aaPredicted RBP17.69■□□□□ 0.42
ZNF541-205ENST00000595558 MAGEB6Q8N7X4 407 aa17.69■□□□□ 0.42
ZNF541-205ENST00000595558 SYKP43405 635 aa17.69■□□□□ 0.42
ZNF541-205ENST00000595558 SPECC1Q5M775 1068 aa17.69■□□□□ 0.42
ZNF541-205ENST00000595558 CMTR1Q8N1G2 835 aaKnown RBP17.69■□□□□ 0.42
ZNF541-205ENST00000595558 DISP2A7MBM2 1401 aa17.69■□□□□ 0.42
ZNF541-205ENST00000595558 SPEF2Q9C093 1822 aa17.69■□□□□ 0.42
ZNF541-205ENST00000595558 FOXN1O15353 648 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 KIF20AO95235 890 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 KRT40Q6A162 431 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 MICU3Q86XE3 530 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 TICAM2Q86XR7 235 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 FOXP4Q8IVH2 680 aaPredicted RBP17.68■□□□□ 0.42
ZNF541-205ENST00000595558 CCDC150Q8NCX0 1101 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 IL6STP40189 918 aaPredicted RBP17.68■□□□□ 0.42
ZNF541-205ENST00000595558 MPHOSPH8Q99549 860 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 L2HGDHQ9H9P8 463 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 ZFYP08048 801 aaPredicted RBP17.68■□□□□ 0.42
ZNF541-205ENST00000595558 PTPAQ15257 358 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 FAM98CQ17RN3 349 aaKnown RBP17.68■□□□□ 0.42
ZNF541-205ENST00000595558 CCDC93Q567U6 631 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
ZNF541-205ENST00000595558 CDHR2Q9BYE9 1310 aa17.67■□□□□ 0.42
ZNF541-205ENST00000595558 METAP2P50579 478 aaKnown RBP eCLIP17.67■□□□□ 0.42
ZNF541-205ENST00000595558 RRP12Q5JTH9 1297 aaKnown RBP17.67■□□□□ 0.42
ZNF541-205ENST00000595558 JAG2Q9Y219 1238 aa17.67■□□□□ 0.42
ZNF541-205ENST00000595558 COL4A1P02462 1669 aa17.67■□□□□ 0.42
ZNF541-205ENST00000595558 PLEKHG2Q9H7P9 1386 aa17.67■□□□□ 0.42
ZNF541-205ENST00000595558 LONRF3Q496Y0 759 aa17.67■□□□□ 0.42
ZNF541-205ENST00000595558 HOMER1Q86YM7 354 aa17.67■□□□□ 0.42
ZNF541-205ENST00000595558 EPB41L4AQ9HCS5 686 aaPredicted RBP17.67■□□□□ 0.42
ZNF541-205ENST00000595558 DNAI1Q9UI46 699 aa17.67■□□□□ 0.42
ZNF541-205ENST00000595558 HPSEQ9Y251 543 aa17.67■□□□□ 0.42
ZNF541-205ENST00000595558 RANBP6O60518 1105 aaKnown RBP17.66■□□□□ 0.42
ZNF541-205ENST00000595558 MBD4O95243 580 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 BMP6P22004 513 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 UBASH3AP57075 661 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 EVX2Q03828 476 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 PDE4BQ07343 736 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 METTL16Q86W50 562 aaKnown RBP17.66■□□□□ 0.42
ZNF541-205ENST00000595558 KRT222Q8N1A0 295 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 SPATA5Q8NB90 893 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 MAP3K14Q99558 947 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 TUBE1Q9UJT0 475 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 ANGEL1Q9UNK9 670 aaKnown RBP17.66■□□□□ 0.42
ZNF541-205ENST00000595558 PSDA5PKW4 1024 aaPredicted RBP17.66■□□□□ 0.42
ZNF541-205ENST00000595558 CAMTA2O94983 1202 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 CHMP4CQ96CF2 233 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 TOMM22Q9NS69 142 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 FANCLQ9NW38 375 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 FAM53CQ9NYF3 392 aa17.66■□□□□ 0.42
ZNF541-205ENST00000595558 ZMYM6O95789 1325 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 SPATA31A1Q5TZJ5 1347 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 TCRBV5S4A2TA0A5A2 114 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 SERPINC1P01008 464 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 GYG1P46976 350 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 LRRFIP1Q32MZ4 808 aaKnown RBP17.65■□□□□ 0.42
ZNF541-205ENST00000595558 CFAP100Q494V2 611 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 APOA5Q6Q788 366 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 ADGRA1Q86SQ6 560 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 AIDAQ96BJ3 306 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 UTP14AQ9BVJ6 771 aaKnown RBP17.65■□□□□ 0.42
ZNF541-205ENST00000595558 SH2B2O14492 632 aaPredicted RBP17.65■□□□□ 0.42
ZNF541-205ENST00000595558 GRIN1Q05586 938 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 PUM3Q15397 648 aaKnown RBP17.65■□□□□ 0.42
ZNF541-205ENST00000595558 FAM177A1Q8N128 213 aaPredicted RBP17.65■□□□□ 0.42
ZNF541-205ENST00000595558 INTS13Q9NVM9 706 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 ABCF2Q9UG63 623 aa17.65■□□□□ 0.42
ZNF541-205ENST00000595558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.65■□□□□ 0.42
ZNF541-205ENST00000595558 IKBKBO14920 756 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 FGFR2P21802 821 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 TPM4P67936 248 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 GNL2Q13823 731 aaKnown RBP17.64■□□□□ 0.41
ZNF541-205ENST00000595558 TERF2Q15554 542 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 TRIM65Q6PJ69 517 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 LCORLQ8N3X6 602 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 STRBPQ96SI9 672 aaKnown RBP17.64■□□□□ 0.41
ZNF541-205ENST00000595558 EPC1Q9H2F5 836 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 TMX1Q9H3N1 280 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 FAM217BQ9NTX9 383 aaPredicted RBP17.64■□□□□ 0.41
ZNF541-205ENST00000595558 AKAP11Q9UKA4 1901 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 KIF2AO00139 706 aaPredicted RBP17.64■□□□□ 0.41
ZNF541-205ENST00000595558 TRDNQ13061 729 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 SLC4A8Q2Y0W8 1093 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 LPIN2Q92539 896 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.64■□□□□ 0.41
ZNF541-205ENST00000595558 PCDHA5Q9Y5H7 936 aa17.64■□□□□ 0.41
ZNF541-205ENST00000595558 C4AP0C0L4 1744 aa17.63■□□□□ 0.41
ZNF541-205ENST00000595558 C4BP0C0L5 1744 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms