RNA–Protein interactions for RNA: ENST00000593742.1

SOD3-202, Transcript of superoxide dismutase 3, humanhuman

TSL 5

Gene SOD3, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3-202ENST00000593742 DDX19BQ9UMR2 479 aa14.71□□□□□ -0.05
SOD3-202ENST00000593742 NOP58Q9Y2X3 529 aaKnown RBP14.71□□□□□ -0.05
SOD3-202ENST00000593742 GSTO1P78417 241 aa14.7□□□□□ -0.06
SOD3-202ENST00000593742 CRHR2Q13324 411 aa14.7□□□□□ -0.06
SOD3-202ENST00000593742 ERO1BQ86YB8 467 aa14.7□□□□□ -0.06
SOD3-202ENST00000593742 ZNF384Q8TF68 577 aa14.7□□□□□ -0.06
SOD3-202ENST00000593742 BRI3BPQ8WY22 251 aa14.7□□□□□ -0.06
SOD3-202ENST00000593742 DDX4Q9NQI0 724 aaKnown RBP14.7□□□□□ -0.06
SOD3-202ENST00000593742 DBNLQ9UJU6 430 aaKnown RBP14.7□□□□□ -0.06
SOD3-202ENST00000593742 DOCK2Q92608 1830 aa14.69□□□□□ -0.06
SOD3-202ENST00000593742 IRF6O14896 467 aa14.69□□□□□ -0.06
SOD3-202ENST00000593742 WDHD1O75717 1129 aaPredicted RBP14.69□□□□□ -0.06
SOD3-202ENST00000593742 LDHCP07864 332 aa14.69□□□□□ -0.06
SOD3-202ENST00000593742 SLURP2P0DP57 97 aa14.69□□□□□ -0.06
SOD3-202ENST00000593742 AACSQ86V21 672 aa14.69□□□□□ -0.06
SOD3-202ENST00000593742 EAF2Q96CJ1 260 aaPredicted RBP14.69□□□□□ -0.06
SOD3-202ENST00000593742 MS4A4AQ96JQ5 239 aa14.69□□□□□ -0.06
SOD3-202ENST00000593742 IDI2Q9BXS1 227 aa14.69□□□□□ -0.06
SOD3-202ENST00000593742 IL1RAPL2Q9NP60 686 aa14.69□□□□□ -0.06
SOD3-202ENST00000593742 GPR75-ASB3A0A0A6YYF3 556 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 DDTLA6NHG4 134 aaPredicted RBP14.68□□□□□ -0.06
SOD3-202ENST00000593742 ENTPD3O75355 529 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 ZAP70P43403 619 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 TAF1CQ15572 869 aaPredicted RBP14.68□□□□□ -0.06
SOD3-202ENST00000593742 C20orf194Q5TEA3 1177 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 NAA16Q6N069 864 aaPredicted RBP14.68□□□□□ -0.06
SOD3-202ENST00000593742 SH3BP5LQ7L8J4 393 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 ERC1Q8IUD2 1116 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 FAM43AQ8N2R8 423 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 FAM163AQ96GL9 167 aaPredicted RBP14.68□□□□□ -0.06
SOD3-202ENST00000593742 NOL10Q9BSC4 688 aaKnown RBP14.68□□□□□ -0.06
SOD3-202ENST00000593742 CFHR5Q9BXR6 569 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 AATFQ9NY61 560 aaKnown RBP eCLIP14.68□□□□□ -0.06
SOD3-202ENST00000593742 NDUFB9Q9Y6M9 179 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 RFX7Q2KHR2 1363 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 LAMB1P07942 1786 aa14.68□□□□□ -0.06
SOD3-202ENST00000593742 TESPA1A2RU30 521 aaPredicted RBP14.67□□□□□ -0.06
SOD3-202ENST00000593742 CYP2E1P05181 493 aaPredicted RBP14.67□□□□□ -0.06
SOD3-202ENST00000593742 CETPP11597 493 aa14.67□□□□□ -0.06
SOD3-202ENST00000593742 RHBDL3P58872 404 aa14.67□□□□□ -0.06
SOD3-202ENST00000593742 PPIL2Q13356 520 aa14.67□□□□□ -0.06
SOD3-202ENST00000593742 SNAPC2Q13487 334 aa14.67□□□□□ -0.06
SOD3-202ENST00000593742 TEX11Q8IYF3 940 aa14.67□□□□□ -0.06
SOD3-202ENST00000593742 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.67□□□□□ -0.06
SOD3-202ENST00000593742 PIH1D3Q9NQM4 214 aaKnown RBP14.67□□□□□ -0.06
SOD3-202ENST00000593742 TRIM17Q9Y577 477 aa14.67□□□□□ -0.06
SOD3-202ENST00000593742 MAST2Q6P0Q8 1798 aa14.66□□□□□ -0.06
SOD3-202ENST00000593742 FAM196BA6NMK8 535 aa14.66□□□□□ -0.06
SOD3-202ENST00000593742 HMMRO75330 724 aa14.66□□□□□ -0.06
SOD3-202ENST00000593742 ECM2O94769 699 aaPredicted RBP14.66□□□□□ -0.06
SOD3-202ENST00000593742 SOX10P56693 466 aa14.66□□□□□ -0.06
SOD3-202ENST00000593742 NOM1Q5C9Z4 860 aaKnown RBP14.66□□□□□ -0.06
SOD3-202ENST00000593742 CD99L2Q8TCZ2 262 aa14.66□□□□□ -0.06
SOD3-202ENST00000593742 SH3RF3Q8TEJ3 882 aaPredicted RBP14.66□□□□□ -0.06
SOD3-202ENST00000593742 ZFYVE28Q9HCC9 887 aa14.66□□□□□ -0.06
SOD3-202ENST00000593742 HPS5Q9UPZ3 1129 aa14.66□□□□□ -0.06
SOD3-202ENST00000593742 MYO5AQ9Y4I1 1855 aaKnown RBP14.65□□□□□ -0.06
SOD3-202ENST00000593742 ATRNL1Q5VV63 1379 aa14.65□□□□□ -0.06
SOD3-202ENST00000593742 BTBD19C9JJ37 291 aa14.65□□□□□ -0.06
SOD3-202ENST00000593742 IDH1O75874 414 aaKnown RBP14.65□□□□□ -0.06
SOD3-202ENST00000593742 PPATQ06203 517 aa14.65□□□□□ -0.06
SOD3-202ENST00000593742 HSP90AB4PQ58FF6 505 aa14.65□□□□□ -0.06
SOD3-202ENST00000593742 RPAP2Q8IXW5 612 aaPredicted RBP14.65□□□□□ -0.06
SOD3-202ENST00000593742 RHPN1Q8TCX5 695 aa14.65□□□□□ -0.06
SOD3-202ENST00000593742 YTHDC1Q96MU7 727 aaKnown RBP14.65□□□□□ -0.06
SOD3-202ENST00000593742 PICK1Q9NRD5 415 aa14.65□□□□□ -0.06
SOD3-202ENST00000593742 ZBTB40Q9NUA8 1239 aa14.65□□□□□ -0.06
SOD3-202ENST00000593742 ZNF112Q9UJU3 913 aa14.65□□□□□ -0.06
SOD3-202ENST00000593742 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
SOD3-202ENST00000593742 BAG3O95817 575 aa14.64□□□□□ -0.07
SOD3-202ENST00000593742 PKN2Q16513 984 aaKnown RBP14.64□□□□□ -0.07
SOD3-202ENST00000593742 ADGRA1Q86SQ6 560 aa14.64□□□□□ -0.07
SOD3-202ENST00000593742 MAPKAPK5Q8IW41 473 aa14.64□□□□□ -0.07
SOD3-202ENST00000593742 SIRT2Q8IXJ6 389 aa14.64□□□□□ -0.07
SOD3-202ENST00000593742 SCYL3Q8IZE3 742 aa14.64□□□□□ -0.07
SOD3-202ENST00000593742 ERO1AQ96HE7 468 aa14.64□□□□□ -0.07
SOD3-202ENST00000593742 ZNF512BQ96KM6 892 aaPredicted RBP14.64□□□□□ -0.07
SOD3-202ENST00000593742 OSBPL5Q9H0X9 879 aaPredicted RBP14.64□□□□□ -0.07
SOD3-202ENST00000593742 CHMP4BQ9H444 224 aaKnown RBP14.64□□□□□ -0.07
SOD3-202ENST00000593742 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.64□□□□□ -0.07
SOD3-202ENST00000593742 PHF20L1A8MW92 1017 aa14.63□□□□□ -0.07
SOD3-202ENST00000593742 CYP7A1P22680 504 aa14.63□□□□□ -0.07
SOD3-202ENST00000593742 SP3Q02447 781 aa14.63□□□□□ -0.07
SOD3-202ENST00000593742 SLC4A8Q2Y0W8 1093 aa14.63□□□□□ -0.07
SOD3-202ENST00000593742 NOL9Q5SY16 702 aaKnown RBP14.63□□□□□ -0.07
SOD3-202ENST00000593742 FBXO46Q6PJ61 603 aaPredicted RBP14.63□□□□□ -0.07
SOD3-202ENST00000593742 CCDC84Q86UT8 332 aaPredicted RBP14.63□□□□□ -0.07
SOD3-202ENST00000593742 CLASRPQ8N2M8 674 aaKnown RBP14.63□□□□□ -0.07
SOD3-202ENST00000593742 MAGEB6Q8N7X4 407 aa14.63□□□□□ -0.07
SOD3-202ENST00000593742 MIGA1Q8NAN2 632 aa14.63□□□□□ -0.07
SOD3-202ENST00000593742 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.63□□□□□ -0.07
SOD3-202ENST00000593742 ZHX2Q9Y6X8 837 aa14.63□□□□□ -0.07
SOD3-202ENST00000593742 IFIT2P09913 472 aaKnown RBP14.62□□□□□ -0.07
SOD3-202ENST00000593742 DYNLL1P63167 89 aaKnown RBP14.62□□□□□ -0.07
SOD3-202ENST00000593742 OTOP1Q7RTM1 612 aa14.62□□□□□ -0.07
SOD3-202ENST00000593742 TGFBRAP1Q8WUH2 860 aa14.62□□□□□ -0.07
SOD3-202ENST00000593742 KIF1BPQ96EK5 621 aa14.62□□□□□ -0.07
SOD3-202ENST00000593742 DNAJC2Q99543 621 aaKnown RBP14.62□□□□□ -0.07
SOD3-202ENST00000593742 ANTXR1Q9H6X2 564 aa14.62□□□□□ -0.07
SOD3-202ENST00000593742 EFCC1Q9HA90 598 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms