RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 DOCK1Q14185 1865 aa28.02■■■□□ 2.08
SSBP4-203ENST00000593641 MROH7-TTC4A0A0A0MT08 1334 aa28.01■■■□□ 2.07
SSBP4-203ENST00000593641 PTPRFP10586 1907 aa28.01■■■□□ 2.07
SSBP4-203ENST00000593641 IPO8O15397 1037 aaKnown RBP28.01■■■□□ 2.07
SSBP4-203ENST00000593641 HOXD10P28358 340 aa28.01■■■□□ 2.07
SSBP4-203ENST00000593641 BTDP43251 543 aa28.01■■■□□ 2.07
SSBP4-203ENST00000593641 PSMC4P43686 418 aa28.01■■■□□ 2.07
SSBP4-203ENST00000593641 ERICH6Q7L0X2 663 aa28.01■■■□□ 2.07
SSBP4-203ENST00000593641 FAM163AQ96GL9 167 aaPredicted RBP28.01■■■□□ 2.07
SSBP4-203ENST00000593641 ADGRA2Q96PE1 1338 aa28■■■□□ 2.07
SSBP4-203ENST00000593641 PHF20L1A8MW92 1017 aa28■■■□□ 2.07
SSBP4-203ENST00000593641 PICALMQ13492 652 aa28■■■□□ 2.07
SSBP4-203ENST00000593641 MOGSQ13724 837 aa28■■■□□ 2.07
SSBP4-203ENST00000593641 NEUROD6Q96NK8 337 aa28■■■□□ 2.07
SSBP4-203ENST00000593641 MGAMO43451 1857 aa28■■■□□ 2.07
SSBP4-203ENST00000593641 CEP290O15078 2479 aa27.99■■■□□ 2.07
SSBP4-203ENST00000593641 FMNL1O95466 1100 aaPredicted RBP27.99■■■□□ 2.07
SSBP4-203ENST00000593641 TRIM47Q96LD4 638 aa27.99■■■□□ 2.07
SSBP4-203ENST00000593641 SRRDQ9UH36 339 aa27.99■■■□□ 2.07
SSBP4-203ENST00000593641 ZHX2Q9Y6X8 837 aa27.99■■■□□ 2.07
SSBP4-203ENST00000593641 GORABQ5T7V8 394 aa27.98■■■□□ 2.07
SSBP4-203ENST00000593641 SH3BP5LQ7L8J4 393 aa27.98■■■□□ 2.07
SSBP4-203ENST00000593641 FASTKD5Q7L8L6 764 aaKnown RBP27.98■■■□□ 2.07
SSBP4-203ENST00000593641 RAET1EQ8TD07 263 aa27.98■■■□□ 2.07
SSBP4-203ENST00000593641 DDTLA6NHG4 134 aaPredicted RBP27.97■■■□□ 2.07
SSBP4-203ENST00000593641 GNAI2P04899 355 aa27.97■■■□□ 2.07
SSBP4-203ENST00000593641 PTPRAP18433 802 aa27.97■■■□□ 2.07
SSBP4-203ENST00000593641 OSBPP22059 807 aa27.97■■■□□ 2.07
SSBP4-203ENST00000593641 CTGFP29279 349 aa27.97■■■□□ 2.07
SSBP4-203ENST00000593641 MECOMQ03112 1051 aa27.97■■■□□ 2.07
SSBP4-203ENST00000593641 DDX4Q9NQI0 724 aaKnown RBP27.97■■■□□ 2.07
SSBP4-203ENST00000593641 MYPNQ86TC9 1320 aa27.96■■■□□ 2.07
SSBP4-203ENST00000593641 A0A0G2JLL6 359 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-203ENST00000593641 TRIM27P14373 513 aa27.96■■■□□ 2.07
SSBP4-203ENST00000593641 GPAT2Q6NUI2 795 aa27.96■■■□□ 2.07
SSBP4-203ENST00000593641 ATF7IPQ6VMQ6 1270 aa27.96■■■□□ 2.07
SSBP4-203ENST00000593641 PRRT2Q7Z6L0 340 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-203ENST00000593641 FRAT1Q92837 279 aaPredicted RBP27.96■■■□□ 2.07
SSBP4-203ENST00000593641 PHIPQ8WWQ0 1821 aa27.96■■■□□ 2.07
SSBP4-203ENST00000593641 GPR75-ASB3A0A0A6YYF3 556 aa27.95■■■□□ 2.06
SSBP4-203ENST00000593641 CTNND1O60716 968 aaKnown RBP27.95■■■□□ 2.06
SSBP4-203ENST00000593641 CYP2C8P10632 490 aa27.95■■■□□ 2.06
SSBP4-203ENST00000593641 GSTO1P78417 241 aa27.95■■■□□ 2.06
SSBP4-203ENST00000593641 MAP3K10Q02779 954 aa27.95■■■□□ 2.06
SSBP4-203ENST00000593641 HMG20BQ9P0W2 317 aa27.95■■■□□ 2.06
SSBP4-203ENST00000593641 FCGRTP55899 365 aa27.94■■■□□ 2.06
SSBP4-203ENST00000593641 G3BP1Q13283 466 aaKnown RBP eCLIP27.94■■■□□ 2.06
SSBP4-203ENST00000593641 GADL1Q6ZQY3 521 aa27.94■■■□□ 2.06
SSBP4-203ENST00000593641 SPATA5Q8NB90 893 aa27.94■■■□□ 2.06
SSBP4-203ENST00000593641 AFG3L2Q9Y4W6 797 aa27.94■■■□□ 2.06
SSBP4-203ENST00000593641 LDHCP07864 332 aa27.93■■■□□ 2.06
SSBP4-203ENST00000593641 BCRP11274 1271 aa27.93■■■□□ 2.06
SSBP4-203ENST00000593641 GRK4P32298 578 aa27.93■■■□□ 2.06
SSBP4-203ENST00000593641 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.93■■■□□ 2.06
SSBP4-203ENST00000593641 RHBDL3P58872 404 aa27.92■■■□□ 2.06
SSBP4-203ENST00000593641 HABP4Q5JVS0 413 aaKnown RBP27.92■■■□□ 2.06
SSBP4-203ENST00000593641 RAI14Q9P0K7 980 aa27.92■■■□□ 2.06
SSBP4-203ENST00000593641 SLC45A1Q9Y2W3 748 aa27.92■■■□□ 2.06
SSBP4-203ENST00000593641 ATAD5Q96QE3 1844 aa27.91■■■□□ 2.06
SSBP4-203ENST00000593641 TRIM75PA6NK02 468 aa27.91■■■□□ 2.06
SSBP4-203ENST00000593641 NPM3O75607 178 aaKnown RBP27.91■■■□□ 2.06
SSBP4-203ENST00000593641 BCAR3O75815 825 aa27.91■■■□□ 2.06
SSBP4-203ENST00000593641 MAP4K4O95819 1239 aaPredicted RBP27.91■■■□□ 2.06
SSBP4-203ENST00000593641 ARID4AP29374 1257 aaPredicted RBP27.91■■■□□ 2.06
SSBP4-203ENST00000593641 PI16Q6UXB8 463 aa27.91■■■□□ 2.06
SSBP4-203ENST00000593641 CLUAP1Q96AJ1 413 aa27.91■■■□□ 2.06
SSBP4-203ENST00000593641 NSUN4Q96CB9 384 aaKnown RBP27.91■■■□□ 2.06
SSBP4-203ENST00000593641 PNMA6EA0A0J9YXQ4 647 aa27.9■■■□□ 2.06
SSBP4-203ENST00000593641 TBC1D12O60347 775 aa27.9■■■□□ 2.06
SSBP4-203ENST00000593641 SLURP2P0DP57 97 aa27.9■■■□□ 2.06
SSBP4-203ENST00000593641 MTFR1Q15390 333 aa27.9■■■□□ 2.06
SSBP4-203ENST00000593641 TBC1D9Q6ZT07 1266 aa27.9■■■□□ 2.06
SSBP4-203ENST00000593641 SMCR8Q8TEV9 937 aaPredicted RBP27.9■■■□□ 2.06
SSBP4-203ENST00000593641 ZNF384Q8TF68 577 aa27.9■■■□□ 2.06
SSBP4-203ENST00000593641 BIN2Q9UBW5 565 aaPredicted RBP27.9■■■□□ 2.06
SSBP4-203ENST00000593641 TNNQ9UQP3 1299 aa27.9■■■□□ 2.06
SSBP4-203ENST00000593641 UQCRFS1P1P0C7P4 283 aa27.89■■■□□ 2.06
SSBP4-203ENST00000593641 PRKCZQ05513 592 aa27.89■■■□□ 2.06
SSBP4-203ENST00000593641 NKX2-3Q8TAU0 364 aa27.89■■■□□ 2.06
SSBP4-203ENST00000593641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.89■■■□□ 2.06
SSBP4-203ENST00000593641 UBXN2AP68543 259 aa27.88■■■□□ 2.05
SSBP4-203ENST00000593641 NOL10Q9BSC4 688 aaKnown RBP27.88■■■□□ 2.05
SSBP4-203ENST00000593641 LRP2BPQ9P2M1 347 aa27.88■■■□□ 2.05
SSBP4-203ENST00000593641 COL2A1P02458 1487 aaPredicted RBP27.88■■■□□ 2.05
SSBP4-203ENST00000593641 MAST2Q6P0Q8 1798 aa27.87■■■□□ 2.05
SSBP4-203ENST00000593641 MCAMP43121 646 aa27.87■■■□□ 2.05
SSBP4-203ENST00000593641 SLAIN1Q8ND83 568 aa27.87■■■□□ 2.05
SSBP4-203ENST00000593641 OSBPL5Q9H0X9 879 aaPredicted RBP27.87■■■□□ 2.05
SSBP4-203ENST00000593641 DOCK3Q8IZD9 2030 aa27.87■■■□□ 2.05
SSBP4-203ENST00000593641 FAM196BA6NMK8 535 aa27.86■■■□□ 2.05
SSBP4-203ENST00000593641 TEX11Q8IYF3 940 aa27.86■■■□□ 2.05
SSBP4-203ENST00000593641 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.86■■■□□ 2.05
SSBP4-203ENST00000593641 PNMA3Q9UL41 463 aa27.86■■■□□ 2.05
SSBP4-203ENST00000593641 AGTPBP1Q9UPW5 1226 aa27.86■■■□□ 2.05
SSBP4-203ENST00000593641 CCL5P13501 91 aa27.85■■■□□ 2.05
SSBP4-203ENST00000593641 ZKSCAN2Q63HK3 967 aa27.85■■■□□ 2.05
SSBP4-203ENST00000593641 CCDC84Q86UT8 332 aaPredicted RBP27.85■■■□□ 2.05
SSBP4-203ENST00000593641 TMEM57Q8N5G2 664 aa27.85■■■□□ 2.05
SSBP4-203ENST00000593641 SHISA4Q96DD7 197 aa27.85■■■□□ 2.05
SSBP4-203ENST00000593641 RNF208Q9H0X6 261 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms