RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 AK9Q5TCS8 1911 aa18.25■□□□□ 0.51
SF3A2-207ENST00000592839 TBC1D12O60347 775 aa18.25■□□□□ 0.51
SF3A2-207ENST00000592839 RGS3P49796 1198 aa18.25■□□□□ 0.51
SF3A2-207ENST00000592839 PPP4CP60510 307 aa18.25■□□□□ 0.51
SF3A2-207ENST00000592839 MKRN3Q13064 507 aaKnown RBP18.25■□□□□ 0.51
SF3A2-207ENST00000592839 GORABQ5T7V8 394 aa18.25■□□□□ 0.51
SF3A2-207ENST00000592839 SH3BP5LQ7L8J4 393 aa18.25■□□□□ 0.51
SF3A2-207ENST00000592839 BRI3BPQ8WY22 251 aa18.25■□□□□ 0.51
SF3A2-207ENST00000592839 KCNH4Q9UQ05 1017 aa18.25■□□□□ 0.51
SF3A2-207ENST00000592839 PHIPQ8WWQ0 1821 aa18.25■□□□□ 0.51
SF3A2-207ENST00000592839 SIPA1L1O43166 1804 aa18.24■□□□□ 0.51
SF3A2-207ENST00000592839 PHF20L1A8MW92 1017 aa18.24■□□□□ 0.51
SF3A2-207ENST00000592839 CYP2E1P05181 493 aaPredicted RBP18.24■□□□□ 0.51
SF3A2-207ENST00000592839 SIRT2Q8IXJ6 389 aa18.24■□□□□ 0.51
SF3A2-207ENST00000592839 R3HDMLQ9H3Y0 253 aa18.24■□□□□ 0.51
SF3A2-207ENST00000592839 DDX4Q9NQI0 724 aaKnown RBP18.24■□□□□ 0.51
SF3A2-207ENST00000592839 FKTNO75072 461 aa18.23■□□□□ 0.51
SF3A2-207ENST00000592839 OS9Q13438 667 aaPredicted RBP18.23■□□□□ 0.51
SF3A2-207ENST00000592839 ZFPM1Q8IX07 1006 aa18.23■□□□□ 0.51
SF3A2-207ENST00000592839 CNKSR2Q8WXI2 1034 aa18.23■□□□□ 0.51
SF3A2-207ENST00000592839 IRF6O14896 467 aa18.22■□□□□ 0.51
SF3A2-207ENST00000592839 HMMRO75330 724 aa18.22■□□□□ 0.51
SF3A2-207ENST00000592839 INPP5BP32019 993 aa18.22■□□□□ 0.51
SF3A2-207ENST00000592839 TCP10Q12799 353 aa18.22■□□□□ 0.51
SF3A2-207ENST00000592839 TTC39AQ5SRH9 613 aa18.22■□□□□ 0.51
SF3A2-207ENST00000592839 TBC1D9Q6ZT07 1266 aa18.22■□□□□ 0.51
SF3A2-207ENST00000592839 CERS3Q8IU89 383 aa18.22■□□□□ 0.51
SF3A2-207ENST00000592839 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.22■□□□□ 0.51
SF3A2-207ENST00000592839 ZKSCAN4Q969J2 545 aaPredicted RBP18.22■□□□□ 0.51
SF3A2-207ENST00000592839 TLR7Q9NYK1 1049 aaKnown RBP18.22■□□□□ 0.51
SF3A2-207ENST00000592839 CCL15-CCL14A0A0B4J2E2 113 aa18.21■□□□□ 0.51
SF3A2-207ENST00000592839 DDTLA6NHG4 134 aaPredicted RBP18.21■□□□□ 0.51
SF3A2-207ENST00000592839 CETPP11597 493 aa18.21■□□□□ 0.51
SF3A2-207ENST00000592839 CRHR2Q13324 411 aa18.21■□□□□ 0.51
SF3A2-207ENST00000592839 SNAPC2Q13487 334 aa18.21■□□□□ 0.51
SF3A2-207ENST00000592839 CCL15Q16663 113 aa18.21■□□□□ 0.51
SF3A2-207ENST00000592839 METTL16Q86W50 562 aaKnown RBP18.21■□□□□ 0.51
SF3A2-207ENST00000592839 RHPN1Q8TCX5 695 aa18.21■□□□□ 0.51
SF3A2-207ENST00000592839 KIF1BPQ96EK5 621 aa18.21■□□□□ 0.51
SF3A2-207ENST00000592839 OTUD5Q96G74 571 aa18.21■□□□□ 0.51
SF3A2-207ENST00000592839 COG6Q9Y2V7 657 aa18.21■□□□□ 0.51
SF3A2-207ENST00000592839 DDX60LQ5H9U9 1706 aaKnown RBP18.2■□□□□ 0.5
SF3A2-207ENST00000592839 PLCG2P16885 1265 aa18.2■□□□□ 0.5
SF3A2-207ENST00000592839 MOGSQ13724 837 aa18.2■□□□□ 0.5
SF3A2-207ENST00000592839 MIGA2Q7L4E1 593 aa18.2■□□□□ 0.5
SF3A2-207ENST00000592839 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.2■□□□□ 0.5
SF3A2-207ENST00000592839 LRP2BPQ9P2M1 347 aa18.2■□□□□ 0.5
SF3A2-207ENST00000592839 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
SF3A2-207ENST00000592839 RAB11FIP3O75154 756 aa18.19■□□□□ 0.5
SF3A2-207ENST00000592839 ZAP70P43403 619 aa18.19■□□□□ 0.5
SF3A2-207ENST00000592839 FBXO46Q6PJ61 603 aaPredicted RBP18.19■□□□□ 0.5
SF3A2-207ENST00000592839 SCYL3Q8IZE3 742 aa18.19■□□□□ 0.5
SF3A2-207ENST00000592839 FAM43AQ8N2R8 423 aa18.19■□□□□ 0.5
SF3A2-207ENST00000592839 OSBPL5Q9H0X9 879 aaPredicted RBP18.19■□□□□ 0.5
SF3A2-207ENST00000592839 RAI14Q9P0K7 980 aa18.19■□□□□ 0.5
SF3A2-207ENST00000592839 TNRC18O15417 2968 aaPredicted RBP18.19■□□□□ 0.5
SF3A2-207ENST00000592839 RBBP6Q7Z6E9 1792 aaKnown RBP18.19■□□□□ 0.5
SF3A2-207ENST00000592839 CXCL11O14625 94 aa18.18■□□□□ 0.5
SF3A2-207ENST00000592839 CTNND1O60716 968 aaKnown RBP18.18■□□□□ 0.5
SF3A2-207ENST00000592839 SLC34A2O95436 690 aa18.18■□□□□ 0.5
SF3A2-207ENST00000592839 BAG3O95817 575 aa18.18■□□□□ 0.5
SF3A2-207ENST00000592839 SOX10P56693 466 aa18.18■□□□□ 0.5
SF3A2-207ENST00000592839 NAA16Q6N069 864 aaPredicted RBP18.18■□□□□ 0.5
SF3A2-207ENST00000592839 ANKRD23Q86SG2 305 aa18.18■□□□□ 0.5
SF3A2-207ENST00000592839 ERO1AQ96HE7 468 aa18.18■□□□□ 0.5
SF3A2-207ENST00000592839 DHX36Q9H2U1 1008 aaKnown RBP18.18■□□□□ 0.5
SF3A2-207ENST00000592839 ATAD5Q96QE3 1844 aa18.18■□□□□ 0.5
SF3A2-207ENST00000592839 CENPFP49454 3210 aa18.18■□□□□ 0.5
SF3A2-207ENST00000592839 ADGRA2Q96PE1 1338 aa18.18■□□□□ 0.5
SF3A2-207ENST00000592839 LOC285556D6RIA3 1793 aa18.17■□□□□ 0.5
SF3A2-207ENST00000592839 TLR2O60603 784 aa18.17■□□□□ 0.5
SF3A2-207ENST00000592839 ADGRA1Q86SQ6 560 aa18.17■□□□□ 0.5
SF3A2-207ENST00000592839 TBC1D2Q9BYX2 928 aa18.17■□□□□ 0.5
SF3A2-207ENST00000592839 CCDC8Q9H0W5 538 aaPredicted RBP18.17■□□□□ 0.5
SF3A2-207ENST00000592839 PIH1D3Q9NQM4 214 aaKnown RBP18.17■□□□□ 0.5
SF3A2-207ENST00000592839 HERC5Q9UII4 1024 aaKnown RBP18.17■□□□□ 0.5
SF3A2-207ENST00000592839 BTBD19C9JJ37 291 aa18.16■□□□□ 0.5
SF3A2-207ENST00000592839 PTPRAP18433 802 aa18.16■□□□□ 0.5
SF3A2-207ENST00000592839 AACSQ86V21 672 aa18.16■□□□□ 0.5
SF3A2-207ENST00000592839 CLASRPQ8N2M8 674 aaKnown RBP18.16■□□□□ 0.5
SF3A2-207ENST00000592839 ZFYVE28Q9HCC9 887 aa18.16■□□□□ 0.5
SF3A2-207ENST00000592839 SNRKQ9NRH2 765 aa18.16■□□□□ 0.5
SF3A2-207ENST00000592839 HPS5Q9UPZ3 1129 aa18.16■□□□□ 0.5
SF3A2-207ENST00000592839 SLC45A1Q9Y2W3 748 aa18.16■□□□□ 0.5
SF3A2-207ENST00000592839 A0A0G2JLL6 359 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-207ENST00000592839 SP3Q02447 781 aa18.15■□□□□ 0.5
SF3A2-207ENST00000592839 TAF1CQ15572 869 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-207ENST00000592839 C20orf194Q5TEA3 1177 aa18.15■□□□□ 0.5
SF3A2-207ENST00000592839 OTOP1Q7RTM1 612 aa18.15■□□□□ 0.5
SF3A2-207ENST00000592839 PRRT2Q7Z6L0 340 aaPredicted RBP18.15■□□□□ 0.5
SF3A2-207ENST00000592839 AFG3L2Q9Y4W6 797 aa18.15■□□□□ 0.5
SF3A2-207ENST00000592839 BRCA2P51587 3418 aa18.15■□□□□ 0.5
SF3A2-207ENST00000592839 TEX11Q8IYF3 940 aa18.14■□□□□ 0.49
SF3A2-207ENST00000592839 SH3RF3Q8TEJ3 882 aaPredicted RBP18.14■□□□□ 0.49
SF3A2-207ENST00000592839 GINM1Q9NU53 330 aa18.14■□□□□ 0.49
SF3A2-207ENST00000592839 PI4KBQ9UBF8 816 aa18.14■□□□□ 0.49
SF3A2-207ENST00000592839 FLT1P17948 1338 aa18.14■□□□□ 0.49
SF3A2-207ENST00000592839 PICALMQ13492 652 aa18.13■□□□□ 0.49
SF3A2-207ENST00000592839 TTF1Q15361 905 aaPredicted RBP18.13■□□□□ 0.49
SF3A2-207ENST00000592839 C17orf99Q6UX52 265 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms