RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 CRY2Q49AN0 593 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 AKNAD1Q5T1N1 836 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 FAM173BQ6P4H8 233 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 TMED8Q6PL24 325 aaPredicted RBP16.6■□□□□ 0.25
RANBP3-229ENST00000592771 PLA2G4DQ86XP0 818 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 MIGA1Q8NAN2 632 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 PGBD1Q96JS3 809 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 RCOR1Q9UKL0 485 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 KIAA1551Q9HCM1 1747 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 MAGEB6P1A0A0J9YX57 407 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 HMGB2P26583 209 aaKnown RBP16.6■□□□□ 0.25
RANBP3-229ENST00000592771 CAMK4Q16566 473 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 SGMS1Q86VZ5 419 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 RGS22Q8NE09 1264 aa16.6■□□□□ 0.25
RANBP3-229ENST00000592771 ZNF396Q96N95 335 aaPredicted RBP16.6■□□□□ 0.25
RANBP3-229ENST00000592771 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
RANBP3-229ENST00000592771 NPHP1O15259 732 aa16.59■□□□□ 0.25
RANBP3-229ENST00000592771 CTDSPL2Q05D32 466 aa16.59■□□□□ 0.25
RANBP3-229ENST00000592771 MTA3Q9BTC8 594 aa16.59■□□□□ 0.25
RANBP3-229ENST00000592771 KRT23Q9C075 422 aa16.59■□□□□ 0.25
RANBP3-229ENST00000592771 ANAPC4Q9UJX5 808 aa16.59■□□□□ 0.25
RANBP3-229ENST00000592771 LEMD3Q9Y2U8 911 aa16.59■□□□□ 0.25
RANBP3-229ENST00000592771 CCDC88AQ3V6T2 1871 aa16.59■□□□□ 0.25
RANBP3-229ENST00000592771 IGSF3O75054 1194 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 APBA3O96018 575 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 LIFRP42702 1097 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 TDO2P48775 406 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 ZNF165P49910 485 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 ZNF75DP51815 510 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 SARM1Q6SZW1 724 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 C15orf52Q6ZUT6 534 aaKnown RBP16.58■□□□□ 0.25
RANBP3-229ENST00000592771 LUZP1Q86V48 1076 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 PROM2Q8N271 834 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 LY9Q9HBG7 655 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 TFCP2L1Q9NZI6 479 aa16.58■□□□□ 0.25
RANBP3-229ENST00000592771 NR1I2O75469 434 aa16.58■□□□□ 0.24
RANBP3-229ENST00000592771 ADD1P35611 737 aaKnown RBP16.58■□□□□ 0.24
RANBP3-229ENST00000592771 APOA5Q6Q788 366 aa16.58■□□□□ 0.24
RANBP3-229ENST00000592771 TXNRD3Q86VQ6 643 aa16.58■□□□□ 0.24
RANBP3-229ENST00000592771 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.24
RANBP3-229ENST00000592771 NSUN4Q96CB9 384 aaKnown RBP16.58■□□□□ 0.24
RANBP3-229ENST00000592771 NID2Q14112 1375 aa16.58■□□□□ 0.24
RANBP3-229ENST00000592771 NEMFO60524 1076 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 SERPINB2P05120 415 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 MFSD6Q6ZSS7 791 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 INCENPQ9NQS7 918 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 ZSWIM5Q9P217 1185 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 PYCARDQ9ULZ3 195 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 XDHP47989 1333 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 ST5P78524 1137 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 TXNRD1Q16881 649 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 MPNDQ8N594 471 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 SPC24Q8NBT2 197 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 BRIP1Q9BX63 1249 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 TRIM5Q9C035 493 aa16.57■□□□□ 0.24
RANBP3-229ENST00000592771 RNF41Q9H4P4 317 aaPredicted RBP16.57■□□□□ 0.24
RANBP3-229ENST00000592771 BAZ2AQ9UIF9 1905 aaKnown RBP16.56■□□□□ 0.24
RANBP3-229ENST00000592771 PPARAQ07869 468 aa16.56■□□□□ 0.24
RANBP3-229ENST00000592771 DDR1Q08345 913 aa16.56■□□□□ 0.24
RANBP3-229ENST00000592771 STX1AQ16623 288 aa16.56■□□□□ 0.24
RANBP3-229ENST00000592771 SENP2Q9HC62 589 aa16.56■□□□□ 0.24
RANBP3-229ENST00000592771 KLRG2A4D1S0 409 aaPredicted RBP16.55■□□□□ 0.24
RANBP3-229ENST00000592771 HOXA10P31260 410 aaPredicted RBP16.55■□□□□ 0.24
RANBP3-229ENST00000592771 MECOMQ03112 1051 aa16.55■□□□□ 0.24
RANBP3-229ENST00000592771 TMEM67Q5HYA8 995 aa16.55■□□□□ 0.24
RANBP3-229ENST00000592771 SDR42E1Q8WUS8 393 aa16.55■□□□□ 0.24
RANBP3-229ENST00000592771 CCDC94Q9BW85 323 aaPredicted RBP16.55■□□□□ 0.24
RANBP3-229ENST00000592771 ORC3Q9UBD5 711 aaPredicted RBP16.55■□□□□ 0.24
RANBP3-229ENST00000592771 LRRC37AA6NMS7 1700 aa16.55■□□□□ 0.24
RANBP3-229ENST00000592771 POLRMTO00411 1230 aaKnown RBP16.55■□□□□ 0.24
RANBP3-229ENST00000592771 CPLX1O14810 134 aa16.55■□□□□ 0.24
RANBP3-229ENST00000592771 PTGS1P23219 599 aa16.55■□□□□ 0.24
RANBP3-229ENST00000592771 METAP2P50579 478 aaKnown RBP eCLIP16.55■□□□□ 0.24
RANBP3-229ENST00000592771 DYNLL1P63167 89 aaKnown RBP16.55■□□□□ 0.24
RANBP3-229ENST00000592771 SYCP1Q15431 976 aa16.55■□□□□ 0.24
RANBP3-229ENST00000592771 CCDC73Q6ZRK6 1079 aa16.55■□□□□ 0.24
RANBP3-229ENST00000592771 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
RANBP3-229ENST00000592771 MRFAP1L1Q96HT8 127 aa16.55■□□□□ 0.24
RANBP3-229ENST00000592771 ECM29Q5VYK3 1845 aa16.54■□□□□ 0.24
RANBP3-229ENST00000592771 DUOX1Q9NRD9 1551 aa16.54■□□□□ 0.24
RANBP3-229ENST00000592771 GOLGA6L19H0YKK7 550 aa16.54■□□□□ 0.24
RANBP3-229ENST00000592771 ZBTB43O43298 467 aa16.54■□□□□ 0.24
RANBP3-229ENST00000592771 CCDC186Q7Z3E2 898 aa16.54■□□□□ 0.24
RANBP3-229ENST00000592771 SLC51AQ86UW1 340 aa16.54■□□□□ 0.24
RANBP3-229ENST00000592771 DRC7Q8IY82 874 aa16.54■□□□□ 0.24
RANBP3-229ENST00000592771 C17orf53Q8N3J3 647 aaPredicted RBP16.54■□□□□ 0.24
RANBP3-229ENST00000592771 FBXO18Q8NFZ0 1043 aa16.54■□□□□ 0.24
RANBP3-229ENST00000592771 FAM217BQ9NTX9 383 aaPredicted RBP16.54■□□□□ 0.24
RANBP3-229ENST00000592771 LAMB1P07942 1786 aa16.54■□□□□ 0.24
RANBP3-229ENST00000592771 NRXN2Q9P2S2 1712 aa16.54■□□□□ 0.24
RANBP3-229ENST00000592771 LTBP1Q14766 1721 aa16.53■□□□□ 0.24
RANBP3-229ENST00000592771 IFIT3O14879 490 aaKnown RBP16.53■□□□□ 0.24
RANBP3-229ENST00000592771 PLSCR1O15162 318 aa16.53■□□□□ 0.24
RANBP3-229ENST00000592771 CDKL5O76039 1030 aa16.53■□□□□ 0.24
RANBP3-229ENST00000592771 FGRP09769 529 aa16.53■□□□□ 0.24
RANBP3-229ENST00000592771 PRDX5P30044 214 aa16.53■□□□□ 0.24
RANBP3-229ENST00000592771 IQCB1Q15051 598 aa16.53■□□□□ 0.24
RANBP3-229ENST00000592771 NTRK3Q16288 839 aa16.53■□□□□ 0.24
RANBP3-229ENST00000592771 RAB11FIP4Q86YS3 637 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms