RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 RCAN1P53805 252 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 PUM3Q15397 648 aaKnown RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 SYNE4Q8N205 404 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 LPIN2Q92539 896 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 ZNF592Q92610 1267 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 FAM53CQ9NYF3 392 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 B4E1Z4 1266 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 PATL2C9JE40 543 aaKnown RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 BIN1O00499 593 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 IRS4O14654 1257 aaPredicted RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 FMNL1O95466 1100 aaPredicted RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 MARCKSP29966 332 aaPredicted RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 IARSP41252 1262 aaKnown RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 FBXW7Q969H0 707 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 CNNM2Q9H8M5 875 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 WWC3Q9ULE0 1092 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 MYH2Q9UKX2 1941 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 CYP19A1P11511 503 aaPredicted RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 IFNAR1P17181 557 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 PHKA1P46020 1223 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 NAA30Q147X3 362 aaPredicted RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 METTL16Q86W50 562 aaKnown RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 WASF1Q92558 559 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 SENP2Q9HC62 589 aa13.39□□□□□ -0.27
ZNF540-210ENST00000592533 EPB41L4AQ9HCS5 686 aaPredicted RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 TRMT1Q9NXH9 659 aaKnown RBP13.39□□□□□ -0.27
ZNF540-210ENST00000592533 FCHSD1Q86WN1 690 aa13.38□□□□□ -0.27
ZNF540-210ENST00000592533 NOL10Q9BSC4 688 aaKnown RBP13.38□□□□□ -0.27
ZNF540-210ENST00000592533 PRDM10Q9NQV6 1147 aa13.38□□□□□ -0.27
ZNF540-210ENST00000592533 COL14A1Q05707 1796 aaKnown RBP13.38□□□□□ -0.27
ZNF540-210ENST00000592533 GOLGA8AA7E2F4 631 aa13.38□□□□□ -0.27
ZNF540-210ENST00000592533 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
ZNF540-210ENST00000592533 MDM2Q00987 491 aaPredicted RBP13.38□□□□□ -0.27
ZNF540-210ENST00000592533 TRIM29Q14134 588 aa13.38□□□□□ -0.27
ZNF540-210ENST00000592533 NT5DC1Q5TFE4 455 aa13.38□□□□□ -0.27
ZNF540-210ENST00000592533 KRBA2Q6ZNG9 492 aa13.38□□□□□ -0.27
ZNF540-210ENST00000592533 PHKBQ93100 1093 aa13.38□□□□□ -0.27
ZNF540-210ENST00000592533 PNPLA7Q6ZV29 1317 aa13.38□□□□□ -0.27
ZNF540-210ENST00000592533 PHLPP2Q6ZVD8 1323 aa13.38□□□□□ -0.27
ZNF540-210ENST00000592533 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 TMEM67Q5HYA8 995 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 MICU3Q86XE3 530 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 VSTM4Q8IW00 320 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 IFNL3Q8IZI9 196 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 AIDAQ96BJ3 306 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 LMOD1P29536 600 aaPredicted RBP13.37□□□□□ -0.27
ZNF540-210ENST00000592533 NOSTRINQ8IVI9 506 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 KRT23Q9C075 422 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 KCNH3Q9ULD8 1083 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 DOT1LQ8TEK3 1739 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 CASZ1Q86V15 1759 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 ATP1A3P13637 1013 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 SSRP1Q08945 709 aaKnown RBP13.37□□□□□ -0.27
ZNF540-210ENST00000592533 PNOCQ13519 176 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 KMT5BQ4FZB7 885 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 ZNF34Q8IZ26 560 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
ZNF540-210ENST00000592533 SPATA5Q8NB90 893 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 STAG1Q8WVM7 1258 aa13.37□□□□□ -0.27
ZNF540-210ENST00000592533 ZNF330Q9Y3S2 320 aaPredicted RBP13.37□□□□□ -0.27
ZNF540-210ENST00000592533 MMP1P03956 469 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 APPP05067 770 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 GNAT2P19087 354 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 GPTP24298 496 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 GABPB1Q06547 395 aaPredicted RBP13.36□□□□□ -0.27
ZNF540-210ENST00000592533 AKNAD1Q5T1N1 836 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
ZNF540-210ENST00000592533 FOXP1Q9H334 677 aaPredicted RBP13.36□□□□□ -0.27
ZNF540-210ENST00000592533 ZSWIM5Q9P217 1185 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 RTL9Q8NET4 1388 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 KIF20AO95235 890 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 UBASH3AP57075 661 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 GNL2Q13823 731 aaKnown RBP13.36□□□□□ -0.27
ZNF540-210ENST00000592533 LONRF3Q496Y0 759 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 STK11IPQ8N1F8 1099 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 SLC4A9Q96Q91 983 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 TRMT112Q9UI30 125 aaKnown RBP13.36□□□□□ -0.27
ZNF540-210ENST00000592533 SLC12A7Q9Y666 1083 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 TACC3Q9Y6A5 838 aa13.36□□□□□ -0.27
ZNF540-210ENST00000592533 RXRAP19793 462 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 OLFM4Q6UX06 510 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 FOXP4Q8IVH2 680 aaPredicted RBP13.35□□□□□ -0.27
ZNF540-210ENST00000592533 BCL9LQ86UU0 1499 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 PTPREP23469 700 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 IL6STP40189 918 aaPredicted RBP13.35□□□□□ -0.27
ZNF540-210ENST00000592533 MAP3K12Q12852 859 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 TBX2Q13207 712 aaPredicted RBP13.35□□□□□ -0.27
ZNF540-210ENST00000592533 NFXL1Q6ZNB6 911 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 CLIC6Q96NY7 704 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 NAPBQ9H115 298 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 HOOK1Q9UJC3 728 aaKnown RBP13.35□□□□□ -0.27
ZNF540-210ENST00000592533 SLC5A1P13866 664 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 H2AFXP16104 143 aaPredicted RBP13.35□□□□□ -0.27
ZNF540-210ENST00000592533 BMP6P22004 513 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 SARSP49591 514 aaKnown RBP13.35□□□□□ -0.27
ZNF540-210ENST00000592533 TOB1P50616 345 aaPredicted RBP13.35□□□□□ -0.27
ZNF540-210ENST00000592533 EVA1CP58658 441 aa13.35□□□□□ -0.27
ZNF540-210ENST00000592533 ETF1P62495 437 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms