RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 MS4A4AQ96JQ5 239 aa20.64■□□□□ 0.89
AP3D1-212ENST00000592488 ATRNL1Q5VV63 1379 aa20.63■□□□□ 0.89
AP3D1-212ENST00000592488 CYP2E1P05181 493 aaPredicted RBP20.63■□□□□ 0.89
AP3D1-212ENST00000592488 INPP5BP32019 993 aa20.63■□□□□ 0.89
AP3D1-212ENST00000592488 PICALMQ13492 652 aa20.63■□□□□ 0.89
AP3D1-212ENST00000592488 CTU1Q7Z7A3 348 aaKnown RBP20.63■□□□□ 0.89
AP3D1-212ENST00000592488 ZSCAN29Q8IWY8 852 aaPredicted RBP20.63■□□□□ 0.89
AP3D1-212ENST00000592488 SIRT2Q8IXJ6 389 aa20.63■□□□□ 0.89
AP3D1-212ENST00000592488 RHPN1Q8TCX5 695 aa20.63■□□□□ 0.89
AP3D1-212ENST00000592488 R3HDMLQ9H3Y0 253 aa20.63■□□□□ 0.89
AP3D1-212ENST00000592488 DDX4Q9NQI0 724 aaKnown RBP20.63■□□□□ 0.89
AP3D1-212ENST00000592488 ZNF112Q9UJU3 913 aa20.63■□□□□ 0.89
AP3D1-212ENST00000592488 CCL15-CCL14A0A0B4J2E2 113 aa20.62■□□□□ 0.89
AP3D1-212ENST00000592488 IGSF3O75054 1194 aa20.62■□□□□ 0.89
AP3D1-212ENST00000592488 ZAP70P43403 619 aa20.62■□□□□ 0.89
AP3D1-212ENST00000592488 CCL15Q16663 113 aa20.62■□□□□ 0.89
AP3D1-212ENST00000592488 NAA16Q6N069 864 aaPredicted RBP20.62■□□□□ 0.89
AP3D1-212ENST00000592488 BRI3BPQ8WY22 251 aa20.62■□□□□ 0.89
AP3D1-212ENST00000592488 PTPN18Q99952 460 aa20.62■□□□□ 0.89
AP3D1-212ENST00000592488 NOL10Q9BSC4 688 aaKnown RBP20.62■□□□□ 0.89
AP3D1-212ENST00000592488 IL1RAPL2Q9NP60 686 aa20.62■□□□□ 0.89
AP3D1-212ENST00000592488 FKTNO75072 461 aa20.61■□□□□ 0.89
AP3D1-212ENST00000592488 NPM3O75607 178 aaKnown RBP20.61■□□□□ 0.89
AP3D1-212ENST00000592488 PPIL2Q13356 520 aa20.61■□□□□ 0.89
AP3D1-212ENST00000592488 SH3BP5LQ7L8J4 393 aa20.61■□□□□ 0.89
AP3D1-212ENST00000592488 KIF1BPQ96EK5 621 aa20.61■□□□□ 0.89
AP3D1-212ENST00000592488 DDTLA6NHG4 134 aaPredicted RBP20.6■□□□□ 0.89
AP3D1-212ENST00000592488 APBB1O00213 710 aa20.6■□□□□ 0.89
AP3D1-212ENST00000592488 PPATQ06203 517 aa20.6■□□□□ 0.89
AP3D1-212ENST00000592488 NOL9Q5SY16 702 aaKnown RBP20.6■□□□□ 0.89
AP3D1-212ENST00000592488 CLASRPQ8N2M8 674 aaKnown RBP20.6■□□□□ 0.89
AP3D1-212ENST00000592488 PIH1D3Q9NQM4 214 aaKnown RBP20.6■□□□□ 0.89
AP3D1-212ENST00000592488 COL2A1P02458 1487 aaPredicted RBP20.59■□□□□ 0.89
AP3D1-212ENST00000592488 IRF6O14896 467 aa20.59■□□□□ 0.89
AP3D1-212ENST00000592488 BAG3O95817 575 aa20.59■□□□□ 0.89
AP3D1-212ENST00000592488 CETPP11597 493 aa20.59■□□□□ 0.89
AP3D1-212ENST00000592488 CRHR2Q13324 411 aa20.59■□□□□ 0.89
AP3D1-212ENST00000592488 SNAPC2Q13487 334 aa20.59■□□□□ 0.89
AP3D1-212ENST00000592488 TEX11Q8IYF3 940 aa20.59■□□□□ 0.89
AP3D1-212ENST00000592488 MYO5AQ9Y4I1 1855 aaKnown RBP20.58■□□□□ 0.89
AP3D1-212ENST00000592488 CCDC85CA6NKD9 419 aa20.58■□□□□ 0.89
AP3D1-212ENST00000592488 RAB11FIP3O75154 756 aa20.58■□□□□ 0.89
AP3D1-212ENST00000592488 PLCG2P16885 1265 aa20.58■□□□□ 0.89
AP3D1-212ENST00000592488 SH3RF3Q8TEJ3 882 aaPredicted RBP20.58■□□□□ 0.89
AP3D1-212ENST00000592488 AATFQ9NY61 560 aaKnown RBP eCLIP20.58■□□□□ 0.89
AP3D1-212ENST00000592488 PHF20L1A8MW92 1017 aa20.57■□□□□ 0.88
AP3D1-212ENST00000592488 MAP3K10Q02779 954 aa20.57■□□□□ 0.88
AP3D1-212ENST00000592488 ADGRA1Q86SQ6 560 aa20.57■□□□□ 0.88
AP3D1-212ENST00000592488 OSBPL5Q9H0X9 879 aaPredicted RBP20.57■□□□□ 0.88
AP3D1-212ENST00000592488 IDH1O75874 414 aaKnown RBP20.56■□□□□ 0.88
AP3D1-212ENST00000592488 IFIT2P09913 472 aaKnown RBP20.56■□□□□ 0.88
AP3D1-212ENST00000592488 PPP4CP60510 307 aa20.56■□□□□ 0.88
AP3D1-212ENST00000592488 TAF1CQ15572 869 aaPredicted RBP20.56■□□□□ 0.88
AP3D1-212ENST00000592488 PKN2Q16513 984 aaKnown RBP20.56■□□□□ 0.88
AP3D1-212ENST00000592488 FAM43AQ8N2R8 423 aa20.56■□□□□ 0.88
AP3D1-212ENST00000592488 NDUFB9Q9Y6M9 179 aa20.56■□□□□ 0.88
AP3D1-212ENST00000592488 SCYL3Q8IZE3 742 aa20.55■□□□□ 0.88
AP3D1-212ENST00000592488 ZCCHC17Q9NP64 241 aaKnown RBP20.55■□□□□ 0.88
AP3D1-212ENST00000592488 PICK1Q9NRD5 415 aa20.55■□□□□ 0.88
AP3D1-212ENST00000592488 KCNH4Q9UQ05 1017 aa20.55■□□□□ 0.88
AP3D1-212ENST00000592488 HTTP42858 3142 aa20.54■□□□□ 0.88
AP3D1-212ENST00000592488 TBC1D12O60347 775 aa20.54■□□□□ 0.88
AP3D1-212ENST00000592488 CYP7A1P22680 504 aa20.54■□□□□ 0.88
AP3D1-212ENST00000592488 MAP3K12Q12852 859 aa20.54■□□□□ 0.88
AP3D1-212ENST00000592488 TMED8Q6PL24 325 aaPredicted RBP20.54■□□□□ 0.88
AP3D1-212ENST00000592488 ANTXR1Q9H6X2 564 aa20.54■□□□□ 0.88
AP3D1-212ENST00000592488 ZFYVE28Q9HCC9 887 aa20.54■□□□□ 0.88
AP3D1-212ENST00000592488 BTBD19C9JJ37 291 aa20.53■□□□□ 0.88
AP3D1-212ENST00000592488 CTNND1O60716 968 aaKnown RBP20.53■□□□□ 0.88
AP3D1-212ENST00000592488 SLURP2P0DP57 97 aa20.53■□□□□ 0.88
AP3D1-212ENST00000592488 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.53■□□□□ 0.88
AP3D1-212ENST00000592488 BCL11AQ9H165 835 aa20.53■□□□□ 0.88
AP3D1-212ENST00000592488 DOCK1Q14185 1865 aa20.53■□□□□ 0.88
AP3D1-212ENST00000592488 CDK5RAP2Q96SN8 1893 aa20.52■□□□□ 0.88
AP3D1-212ENST00000592488 TTF1Q15361 905 aaPredicted RBP20.52■□□□□ 0.88
AP3D1-212ENST00000592488 CERS3Q8IU89 383 aa20.52■□□□□ 0.88
AP3D1-212ENST00000592488 MAPKAPK5Q8IW41 473 aa20.52■□□□□ 0.88
AP3D1-212ENST00000592488 MAGEB6Q8N7X4 407 aa20.52■□□□□ 0.88
AP3D1-212ENST00000592488 TGFBRAP1Q8WUH2 860 aa20.52■□□□□ 0.88
AP3D1-212ENST00000592488 ERO1AQ96HE7 468 aa20.52■□□□□ 0.88
AP3D1-212ENST00000592488 YTHDC1Q96MU7 727 aaKnown RBP20.52■□□□□ 0.88
AP3D1-212ENST00000592488 DHX36Q9H2U1 1008 aaKnown RBP20.52■□□□□ 0.88
AP3D1-212ENST00000592488 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.52■□□□□ 0.88
AP3D1-212ENST00000592488 FOCADQ5VW36 1801 aa20.52■□□□□ 0.88
AP3D1-212ENST00000592488 FLT1P17948 1338 aa20.52■□□□□ 0.87
AP3D1-212ENST00000592488 CXCL11O14625 94 aa20.51■□□□□ 0.87
AP3D1-212ENST00000592488 PTPRAP18433 802 aa20.51■□□□□ 0.87
AP3D1-212ENST00000592488 SP3Q02447 781 aa20.51■□□□□ 0.87
AP3D1-212ENST00000592488 FBXO46Q6PJ61 603 aaPredicted RBP20.51■□□□□ 0.87
AP3D1-212ENST00000592488 LRRCC1Q9C099 1032 aa20.51■□□□□ 0.87
AP3D1-212ENST00000592488 ZHX2Q9Y6X8 837 aa20.51■□□□□ 0.87
AP3D1-212ENST00000592488 FAM196BA6NMK8 535 aa20.5■□□□□ 0.87
AP3D1-212ENST00000592488 RRP1P56182 461 aaKnown RBP20.5■□□□□ 0.87
AP3D1-212ENST00000592488 DYNLL1P63167 89 aaKnown RBP20.5■□□□□ 0.87
AP3D1-212ENST00000592488 ANKRD23Q86SG2 305 aa20.5■□□□□ 0.87
AP3D1-212ENST00000592488 MIGA1Q8NAN2 632 aa20.5■□□□□ 0.87
AP3D1-212ENST00000592488 DNAJC2Q99543 621 aaKnown RBP20.5■□□□□ 0.87
AP3D1-212ENST00000592488 PI4KBQ9UBF8 816 aa20.5■□□□□ 0.87
AP3D1-212ENST00000592488 HERC5Q9UII4 1024 aaKnown RBP20.5■□□□□ 0.87
AP3D1-212ENST00000592488 HPS5Q9UPZ3 1129 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms