RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 MAP3K10Q02779 954 aa24.74■■□□□ 1.55
CIRBP-239ENST00000592467 ZNF296Q8WUU4 475 aaPredicted RBP24.74■■□□□ 1.55
CIRBP-239ENST00000592467 PIH1D3Q9NQM4 214 aaKnown RBP24.74■■□□□ 1.55
CIRBP-239ENST00000592467 FOCADQ5VW36 1801 aa24.74■■□□□ 1.55
CIRBP-239ENST00000592467 NPM3O75607 178 aaKnown RBP24.73■■□□□ 1.55
CIRBP-239ENST00000592467 ALDH1A1P00352 501 aa24.73■■□□□ 1.55
CIRBP-239ENST00000592467 DGKZQ13574 1117 aa24.73■■□□□ 1.55
CIRBP-239ENST00000592467 HSP90AB4PQ58FF6 505 aa24.73■■□□□ 1.55
CIRBP-239ENST00000592467 BRI3BPQ8WY22 251 aa24.73■■□□□ 1.55
CIRBP-239ENST00000592467 OTUD5Q96G74 571 aa24.73■■□□□ 1.55
CIRBP-239ENST00000592467 IL1RAPL2Q9NP60 686 aa24.73■■□□□ 1.55
CIRBP-239ENST00000592467 LRP2BPQ9P2M1 347 aa24.73■■□□□ 1.55
CIRBP-239ENST00000592467 PHF20L1A8MW92 1017 aa24.72■■□□□ 1.55
CIRBP-239ENST00000592467 LDHCP07864 332 aa24.72■■□□□ 1.55
CIRBP-239ENST00000592467 SLURP2P0DP57 97 aa24.72■■□□□ 1.55
CIRBP-239ENST00000592467 ADGRA1Q86SQ6 560 aa24.72■■□□□ 1.55
CIRBP-239ENST00000592467 AACSQ86V21 672 aa24.72■■□□□ 1.55
CIRBP-239ENST00000592467 ERO1BQ86YB8 467 aa24.72■■□□□ 1.55
CIRBP-239ENST00000592467 SIPA1L1O43166 1804 aa24.71■■□□□ 1.55
CIRBP-239ENST00000592467 MAP4K4O95819 1239 aaPredicted RBP24.71■■□□□ 1.55
CIRBP-239ENST00000592467 NOL9Q5SY16 702 aaKnown RBP24.71■■□□□ 1.55
CIRBP-239ENST00000592467 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.71■■□□□ 1.55
CIRBP-239ENST00000592467 CHMP4BQ9H444 224 aaKnown RBP24.71■■□□□ 1.55
CIRBP-239ENST00000592467 COL2A1P02458 1487 aaPredicted RBP24.7■■□□□ 1.55
CIRBP-239ENST00000592467 HMMRO75330 724 aa24.7■■□□□ 1.54
CIRBP-239ENST00000592467 PICALMQ13492 652 aa24.7■■□□□ 1.54
CIRBP-239ENST00000592467 NDUFB9Q9Y6M9 179 aa24.7■■□□□ 1.54
CIRBP-239ENST00000592467 IRF6O14896 467 aa24.69■■□□□ 1.54
CIRBP-239ENST00000592467 IGSF3O75054 1194 aa24.69■■□□□ 1.54
CIRBP-239ENST00000592467 GTF2A2P52657 109 aa24.69■■□□□ 1.54
CIRBP-239ENST00000592467 PPIL2Q13356 520 aa24.69■■□□□ 1.54
CIRBP-239ENST00000592467 NAA16Q6N069 864 aaPredicted RBP24.69■■□□□ 1.54
CIRBP-239ENST00000592467 KIF1BPQ96EK5 621 aa24.69■■□□□ 1.54
CIRBP-239ENST00000592467 PHIPQ8WWQ0 1821 aa24.69■■□□□ 1.54
CIRBP-239ENST00000592467 PPP4CP60510 307 aa24.68■■□□□ 1.54
CIRBP-239ENST00000592467 CTU1Q7Z7A3 348 aaKnown RBP24.68■■□□□ 1.54
CIRBP-239ENST00000592467 SH3RF3Q8TEJ3 882 aaPredicted RBP24.68■■□□□ 1.54
CIRBP-239ENST00000592467 ANTXR1Q9H6X2 564 aa24.68■■□□□ 1.54
CIRBP-239ENST00000592467 DOCK1Q14185 1865 aa24.68■■□□□ 1.54
CIRBP-239ENST00000592467 CCL15-CCL14A0A0B4J2E2 113 aa24.67■■□□□ 1.54
CIRBP-239ENST00000592467 RAB11FIP3O75154 756 aa24.67■■□□□ 1.54
CIRBP-239ENST00000592467 PPATQ06203 517 aa24.67■■□□□ 1.54
CIRBP-239ENST00000592467 CRHR2Q13324 411 aa24.67■■□□□ 1.54
CIRBP-239ENST00000592467 CCL15Q16663 113 aa24.67■■□□□ 1.54
CIRBP-239ENST00000592467 FAM43AQ8N2R8 423 aa24.67■■□□□ 1.54
CIRBP-239ENST00000592467 OSBPL5Q9H0X9 879 aaPredicted RBP24.67■■□□□ 1.54
CIRBP-239ENST00000592467 APBB1O00213 710 aa24.66■■□□□ 1.54
CIRBP-239ENST00000592467 AATFQ9NY61 560 aaKnown RBP eCLIP24.66■■□□□ 1.54
CIRBP-239ENST00000592467 FKTNO75072 461 aa24.65■■□□□ 1.54
CIRBP-239ENST00000592467 OTUD7BQ6GQQ9 843 aa24.65■■□□□ 1.54
CIRBP-239ENST00000592467 ZSCAN29Q8IWY8 852 aaPredicted RBP24.65■■□□□ 1.54
CIRBP-239ENST00000592467 TEX11Q8IYF3 940 aa24.65■■□□□ 1.54
CIRBP-239ENST00000592467 CLASRPQ8N2M8 674 aaKnown RBP24.65■■□□□ 1.54
CIRBP-239ENST00000592467 KCNH4Q9UQ05 1017 aa24.65■■□□□ 1.54
CIRBP-239ENST00000592467 TBC1D12O60347 775 aa24.64■■□□□ 1.54
CIRBP-239ENST00000592467 MOGSQ13724 837 aa24.64■■□□□ 1.54
CIRBP-239ENST00000592467 PTPRFP10586 1907 aa24.64■■□□□ 1.53
CIRBP-239ENST00000592467 HTTP42858 3142 aa24.63■■□□□ 1.53
CIRBP-239ENST00000592467 CETPP11597 493 aa24.63■■□□□ 1.53
CIRBP-239ENST00000592467 CAP1Q01518 475 aa24.63■■□□□ 1.53
CIRBP-239ENST00000592467 SNAPC2Q13487 334 aa24.63■■□□□ 1.53
CIRBP-239ENST00000592467 SCYL3Q8IZE3 742 aa24.63■■□□□ 1.53
CIRBP-239ENST00000592467 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.63■■□□□ 1.53
CIRBP-239ENST00000592467 ATAD5Q96QE3 1844 aa24.63■■□□□ 1.53
CIRBP-239ENST00000592467 BTBD19C9JJ37 291 aa24.62■■□□□ 1.53
CIRBP-239ENST00000592467 BAG3O95817 575 aa24.62■■□□□ 1.53
CIRBP-239ENST00000592467 FAM196BA6NMK8 535 aa24.61■■□□□ 1.53
CIRBP-239ENST00000592467 IDH1O75874 414 aaKnown RBP24.61■■□□□ 1.53
CIRBP-239ENST00000592467 CYP7A1P22680 504 aa24.61■■□□□ 1.53
CIRBP-239ENST00000592467 DYNLL1P63167 89 aaKnown RBP24.61■■□□□ 1.53
CIRBP-239ENST00000592467 ZCCHC17Q9NP64 241 aaKnown RBP24.61■■□□□ 1.53
CIRBP-239ENST00000592467 CCDC85CA6NKD9 419 aa24.6■■□□□ 1.53
CIRBP-239ENST00000592467 PLCG2P16885 1265 aa24.6■■□□□ 1.53
CIRBP-239ENST00000592467 PTPRAP18433 802 aa24.6■■□□□ 1.53
CIRBP-239ENST00000592467 RRP1P56182 461 aaKnown RBP24.6■■□□□ 1.53
CIRBP-239ENST00000592467 RRP1BQ14684 758 aaKnown RBP24.6■■□□□ 1.53
CIRBP-239ENST00000592467 MAGEB6Q8N7X4 407 aa24.6■■□□□ 1.53
CIRBP-239ENST00000592467 FLT1P17948 1338 aa24.6■■□□□ 1.53
CIRBP-239ENST00000592467 CTNND1O60716 968 aaKnown RBP24.59■■□□□ 1.53
CIRBP-239ENST00000592467 IFIT2P09913 472 aaKnown RBP24.59■■□□□ 1.53
CIRBP-239ENST00000592467 TAF1CQ15572 869 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-239ENST00000592467 TGFBRAP1Q8WUH2 860 aa24.59■■□□□ 1.53
CIRBP-239ENST00000592467 NOL10Q9BSC4 688 aaKnown RBP24.59■■□□□ 1.53
CIRBP-239ENST00000592467 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.59■■□□□ 1.53
CIRBP-239ENST00000592467 MYH1P12882 1939 aa24.59■■□□□ 1.53
CIRBP-239ENST00000592467 DDX60LQ5H9U9 1706 aaKnown RBP24.58■■□□□ 1.53
CIRBP-239ENST00000592467 PKN2Q16513 984 aaKnown RBP24.58■■□□□ 1.53
CIRBP-239ENST00000592467 METTL16Q86W50 562 aaKnown RBP24.58■■□□□ 1.53
CIRBP-239ENST00000592467 MAPKAPK5Q8IW41 473 aa24.58■■□□□ 1.53
CIRBP-239ENST00000592467 DCTPP1Q9H773 170 aa24.58■■□□□ 1.53
CIRBP-239ENST00000592467 AFG3L2Q9Y4W6 797 aa24.58■■□□□ 1.53
CIRBP-239ENST00000592467 ZSWIM8A7E2V4 1837 aa24.57■■□□□ 1.52
CIRBP-239ENST00000592467 CXCL11O14625 94 aa24.57■■□□□ 1.52
CIRBP-239ENST00000592467 SMARCA5O60264 1052 aaPredicted RBP24.57■■□□□ 1.52
CIRBP-239ENST00000592467 MAP3K12Q12852 859 aa24.57■■□□□ 1.52
CIRBP-239ENST00000592467 TMED8Q6PL24 325 aaPredicted RBP24.57■■□□□ 1.52
CIRBP-239ENST00000592467 EDC3Q96F86 508 aaKnown RBP24.57■■□□□ 1.52
CIRBP-239ENST00000592467 YTHDC1Q96MU7 727 aaKnown RBP24.57■■□□□ 1.52
CIRBP-239ENST00000592467 DNAJC18Q9H819 358 aa24.57■■□□□ 1.52
CIRBP-239ENST00000592467 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms