RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 LDLRAD1Q5T700 205 aa22.6■■□□□ 1.21
TCF3-216ENST00000592395 FZD1Q9UP38 647 aa22.6■■□□□ 1.21
TCF3-216ENST00000592395 ERC2O15083 957 aa22.59■■□□□ 1.21
TCF3-216ENST00000592395 MX1P20591 662 aa22.59■■□□□ 1.21
TCF3-216ENST00000592395 IREB2P48200 963 aaKnown RBP22.59■■□□□ 1.21
TCF3-216ENST00000592395 TSHZ3Q63HK5 1081 aa22.59■■□□□ 1.21
TCF3-216ENST00000592395 CERS3Q8IU89 383 aa22.59■■□□□ 1.21
TCF3-216ENST00000592395 OTUD7AQ8TE49 926 aaPredicted RBP22.59■■□□□ 1.21
TCF3-216ENST00000592395 RTN4Q9NQC3 1192 aaKnown RBP22.59■■□□□ 1.21
TCF3-216ENST00000592395 OTOFQ9HC10 1997 aa22.59■■□□□ 1.21
TCF3-216ENST00000592395 SALL3Q9BXA9 1300 aa22.58■■□□□ 1.21
TCF3-216ENST00000592395 UNCXA6NJT0 531 aa22.58■■□□□ 1.21
TCF3-216ENST00000592395 USP2O75604 605 aaPredicted RBP22.58■■□□□ 1.21
TCF3-216ENST00000592395 SLC10A3P09131 477 aa22.58■■□□□ 1.21
TCF3-216ENST00000592395 PDE6AP16499 860 aa22.58■■□□□ 1.21
TCF3-216ENST00000592395 PICALMQ13492 652 aa22.58■■□□□ 1.21
TCF3-216ENST00000592395 SLC9C2Q5TAH2 1124 aa22.58■■□□□ 1.21
TCF3-216ENST00000592395 TEX11Q8IYF3 940 aa22.58■■□□□ 1.21
TCF3-216ENST00000592395 SH3RF3Q8TEJ3 882 aaPredicted RBP22.58■■□□□ 1.21
TCF3-216ENST00000592395 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.58■■□□□ 1.213e-8■■□□□ 14.5
TCF3-216ENST00000592395 DDX4Q9NQI0 724 aaKnown RBP22.58■■□□□ 1.21
TCF3-216ENST00000592395 FAM155AB1AL88 458 aaPredicted RBP22.57■■□□□ 1.2
TCF3-216ENST00000592395 GLRX3O76003 335 aaKnown RBP22.57■■□□□ 1.2
TCF3-216ENST00000592395 MAP2K2P36507 400 aa22.57■■□□□ 1.2
TCF3-216ENST00000592395 NOGQ13253 232 aa22.57■■□□□ 1.2
TCF3-216ENST00000592395 DCAF15Q66K64 600 aa22.57■■□□□ 1.2
TCF3-216ENST00000592395 RASAL3Q86YV0 1011 aa22.57■■□□□ 1.2
TCF3-216ENST00000592395 ZFPM1Q8IX07 1006 aa22.57■■□□□ 1.2
TCF3-216ENST00000592395 COL2A1P02458 1487 aaPredicted RBP22.56■■□□□ 1.2
TCF3-216ENST00000592395 B4GALNT3Q6L9W6 998 aa22.56■■□□□ 1.2
TCF3-216ENST00000592395 PI4K2BQ8TCG2 481 aa22.56■■□□□ 1.2
TCF3-216ENST00000592395 LNPKQ9C0E8 428 aa22.56■■□□□ 1.2
TCF3-216ENST00000592395 ATRNL1Q5VV63 1379 aa22.55■■□□□ 1.2
TCF3-216ENST00000592395 AOC2O75106 756 aa22.55■■□□□ 1.2
TCF3-216ENST00000592395 NUCB1Q02818 461 aa22.55■■□□□ 1.2
TCF3-216ENST00000592395 ZSCAN29Q8IWY8 852 aaPredicted RBP22.55■■□□□ 1.2
TCF3-216ENST00000592395 ANKRD13AQ8IZ07 590 aa22.55■■□□□ 1.2
TCF3-216ENST00000592395 MIGA1Q8NAN2 632 aa22.55■■□□□ 1.2
TCF3-216ENST00000592395 ZNF532Q9HCE3 1301 aa22.55■■□□□ 1.2
TCF3-216ENST00000592395 TCRBV5S4A2TA0A5A2 114 aa22.54■■□□□ 1.2
TCF3-216ENST00000592395 ADD2P35612 726 aa22.54■■□□□ 1.2
TCF3-216ENST00000592395 DYNLL1P63167 89 aaKnown RBP22.54■■□□□ 1.2
TCF3-216ENST00000592395 CHD1LQ86WJ1 897 aa22.54■■□□□ 1.2
TCF3-216ENST00000592395 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.54■■□□□ 1.24e-7■■■□□ 18.8
TCF3-216ENST00000592395 CSRNP1Q96S65 589 aa22.54■■□□□ 1.2
TCF3-216ENST00000592395 OSBPL5Q9H0X9 879 aaPredicted RBP22.54■■□□□ 1.2
TCF3-216ENST00000592395 STAP2Q9UGK3 403 aa22.54■■□□□ 1.2
TCF3-216ENST00000592395 DDTLA6NHG4 134 aaPredicted RBP22.53■■□□□ 1.2
TCF3-216ENST00000592395 ZSCAN25Q6NSZ9 544 aa22.53■■□□□ 1.2
TCF3-216ENST00000592395 MIGA2Q7L4E1 593 aa22.53■■□□□ 1.2
TCF3-216ENST00000592395 SH3BP5LQ7L8J4 393 aa22.53■■□□□ 1.2
TCF3-216ENST00000592395 KBTBD3Q8NAB2 608 aa22.53■■□□□ 1.2
TCF3-216ENST00000592395 TGFBRAP1Q8WUH2 860 aa22.53■■□□□ 1.2
TCF3-216ENST00000592395 SLC10A4Q96EP9 437 aa22.53■■□□□ 1.2
TCF3-216ENST00000592395 RIOK1Q9BRS2 568 aaKnown RBP22.53■■□□□ 1.2
TCF3-216ENST00000592395 ZNF341Q9BYN7 854 aa22.53■■□□□ 1.2
TCF3-216ENST00000592395 MAGEB6P1A0A0J9YX57 407 aa22.52■■□□□ 1.2
TCF3-216ENST00000592395 PDE1AP54750 535 aa22.52■■□□□ 1.2
TCF3-216ENST00000592395 MAP3K9P80192 1104 aa22.52■■□□□ 1.2
TCF3-216ENST00000592395 MAP2K1Q02750 393 aaPredicted RBP22.52■■□□□ 1.2
TCF3-216ENST00000592395 CLMNQ96JQ2 1002 aa22.52■■□□□ 1.2
TCF3-216ENST00000592395 FLT1P17948 1338 aa22.52■■□□□ 1.2
TCF3-216ENST00000592395 UBE3CQ15386 1083 aa22.51■■□□□ 1.19
TCF3-216ENST00000592395 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.51■■□□□ 1.19
TCF3-216ENST00000592395 WRNIP1Q96S55 665 aa22.51■■□□□ 1.19
TCF3-216ENST00000592395 CSADQ9Y600 493 aa22.51■■□□□ 1.19
TCF3-216ENST00000592395 LAMB1P07942 1786 aa22.5■■□□□ 1.19
TCF3-216ENST00000592395 MAPKAPK5Q8IW41 473 aa22.5■■□□□ 1.19
TCF3-216ENST00000592395 ZIC5Q96T25 663 aa22.5■■□□□ 1.19
TCF3-216ENST00000592395 DHX36Q9H2U1 1008 aaKnown RBP22.5■■□□□ 1.19
TCF3-216ENST00000592395 WBP1LQ9NX94 342 aa22.5■■□□□ 1.19
TCF3-216ENST00000592395 MYH1P12882 1939 aa22.5■■□□□ 1.19
TCF3-216ENST00000592395 HSPA1AP0DMV8 641 aaKnown RBP22.49■■□□□ 1.19
TCF3-216ENST00000592395 HSPA1BP0DMV9 641 aaKnown RBP22.49■■□□□ 1.19
TCF3-216ENST00000592395 USP5P45974 858 aa22.49■■□□□ 1.19
TCF3-216ENST00000592395 VASPP50552 380 aaPredicted RBP22.49■■□□□ 1.19
TCF3-216ENST00000592395 KIF23Q02241 960 aaPredicted RBP22.49■■□□□ 1.19
TCF3-216ENST00000592395 VGLL4Q14135 290 aa22.49■■□□□ 1.19
TCF3-216ENST00000592395 SPRYD7Q5W111 196 aa22.49■■□□□ 1.19
TCF3-216ENST00000592395 ZNF112Q9UJU3 913 aa22.49■■□□□ 1.19
TCF3-216ENST00000592395 SIPA1L1O43166 1804 aa22.48■■□□□ 1.19
TCF3-216ENST00000592395 NAV1Q8NEY1 1877 aa22.48■■□□□ 1.19
TCF3-216ENST00000592395 ZFYP08048 801 aaPredicted RBP22.48■■□□□ 1.19
TCF3-216ENST00000592395 MAP3K10Q02779 954 aa22.48■■□□□ 1.19
TCF3-216ENST00000592395 LRRFIP1Q32MZ4 808 aaKnown RBP22.48■■□□□ 1.19
TCF3-216ENST00000592395 SLFNL1Q499Z3 407 aa22.48■■□□□ 1.19
TCF3-216ENST00000592395 REM2Q8IYK8 340 aaPredicted RBP22.48■■□□□ 1.19
TCF3-216ENST00000592395 WNK4Q96J92 1243 aa22.48■■□□□ 1.19
TCF3-216ENST00000592395 CRNKL1Q9BZJ0 848 aaKnown RBP22.48■■□□□ 1.19
TCF3-216ENST00000592395 ELP3Q9H9T3 547 aa22.48■■□□□ 1.19
TCF3-216ENST00000592395 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.48■■□□□ 1.19
TCF3-216ENST00000592395 TBC1D12O60347 775 aa22.47■■□□□ 1.19
TCF3-216ENST00000592395 CENPBP07199 599 aaPredicted RBP22.47■■□□□ 1.19
TCF3-216ENST00000592395 ZBTB48P10074 688 aaPredicted RBP22.47■■□□□ 1.19
TCF3-216ENST00000592395 LCORLQ8N3X6 602 aa22.47■■□□□ 1.19
TCF3-216ENST00000592395 AIDAQ96BJ3 306 aa22.47■■□□□ 1.19
TCF3-216ENST00000592395 BEGAINQ9BUH8 593 aa22.47■■□□□ 1.19
TCF3-216ENST00000592395 PI4KBQ9UBF8 816 aa22.47■■□□□ 1.19
TCF3-216ENST00000592395 DDX60LQ5H9U9 1706 aaKnown RBP22.47■■□□□ 1.19
TCF3-216ENST00000592395 CHGBP05060 677 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms