RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 SPATA5Q8NB90 893 aa23.26■■□□□ 1.31
CCDC43-205ENST00000592333 HMG20BQ9P0W2 317 aa23.26■■□□□ 1.31
CCDC43-205ENST00000592333 TBC1D12O60347 775 aa23.25■■□□□ 1.31
CCDC43-205ENST00000592333 BTDP43251 543 aa23.25■■□□□ 1.31
CCDC43-205ENST00000592333 CAP1Q01518 475 aa23.25■■□□□ 1.31
CCDC43-205ENST00000592333 MECOMQ03112 1051 aa23.25■■□□□ 1.31
CCDC43-205ENST00000592333 ZFPM1Q8IX07 1006 aa23.25■■□□□ 1.31
CCDC43-205ENST00000592333 ZNF333Q96JL9 665 aa23.25■■□□□ 1.31
CCDC43-205ENST00000592333 PNMA6EA0A0J9YXQ4 647 aa23.24■■□□□ 1.31
CCDC43-205ENST00000592333 PDHXO00330 501 aa23.24■■□□□ 1.31
CCDC43-205ENST00000592333 CTNND1O60716 968 aaKnown RBP23.24■■□□□ 1.31
CCDC43-205ENST00000592333 POLA2Q14181 598 aa23.24■■□□□ 1.31
CCDC43-205ENST00000592333 FASTKD5Q7L8L6 764 aaKnown RBP23.24■■□□□ 1.31
CCDC43-205ENST00000592333 CLUAP1Q96AJ1 413 aa23.24■■□□□ 1.31
CCDC43-205ENST00000592333 TMEM106CQ9BVX2 250 aa23.24■■□□□ 1.31
CCDC43-205ENST00000592333 PICK1Q9NRD5 415 aa23.24■■□□□ 1.31
CCDC43-205ENST00000592333 DOCK2Q92608 1830 aa23.24■■□□□ 1.31
CCDC43-205ENST00000592333 RHBDL3P58872 404 aa23.23■■□□□ 1.31
CCDC43-205ENST00000592333 MOGSQ13724 837 aa23.23■■□□□ 1.31
CCDC43-205ENST00000592333 SLC9C1Q4G0N8 1177 aa23.23■■□□□ 1.31
CCDC43-205ENST00000592333 ZSCAN29Q8IWY8 852 aaPredicted RBP23.23■■□□□ 1.31
CCDC43-205ENST00000592333 SSH3Q8TE77 659 aa23.23■■□□□ 1.31
CCDC43-205ENST00000592333 NSUN4Q96CB9 384 aaKnown RBP23.23■■□□□ 1.31
CCDC43-205ENST00000592333 SLC45A1Q9Y2W3 748 aa23.23■■□□□ 1.31
CCDC43-205ENST00000592333 COL2A1P02458 1487 aaPredicted RBP23.23■■□□□ 1.31
CCDC43-205ENST00000592333 PTPRAP18433 802 aa23.22■■□□□ 1.31
CCDC43-205ENST00000592333 HOXD10P28358 340 aa23.22■■□□□ 1.31
CCDC43-205ENST00000592333 ATP8B2P98198 1209 aa23.22■■□□□ 1.31
CCDC43-205ENST00000592333 SH3BP5LQ7L8J4 393 aa23.22■■□□□ 1.31
CCDC43-205ENST00000592333 TMEM57Q8N5G2 664 aa23.22■■□□□ 1.31
CCDC43-205ENST00000592333 PARK7Q99497 189 aaKnown RBP23.22■■□□□ 1.31
CCDC43-205ENST00000592333 PTCH2Q9Y6C5 1203 aa23.22■■□□□ 1.31
CCDC43-205ENST00000592333 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.22■■□□□ 1.31
CCDC43-205ENST00000592333 POTEFA5A3E0 1075 aa23.21■■□□□ 1.31
CCDC43-205ENST00000592333 DDTLA6NHG4 134 aaPredicted RBP23.21■■□□□ 1.31
CCDC43-205ENST00000592333 ZNF512BQ96KM6 892 aaPredicted RBP23.21■■□□□ 1.31
CCDC43-205ENST00000592333 AFG3L2Q9Y4W6 797 aa23.21■■□□□ 1.31
CCDC43-205ENST00000592333 ADGRA2Q96PE1 1338 aa23.21■■□□□ 1.31
CCDC43-205ENST00000592333 CENPFP49454 3210 aa23.2■■□□□ 1.3
CCDC43-205ENST00000592333 A0A0G2JLL6 359 aaPredicted RBP23.2■■□□□ 1.3
CCDC43-205ENST00000592333 PRRT2Q7Z6L0 340 aaPredicted RBP23.2■■□□□ 1.3
CCDC43-205ENST00000592333 ZNF384Q8TF68 577 aa23.2■■□□□ 1.3
CCDC43-205ENST00000592333 TBC1D2Q9BYX2 928 aa23.2■■□□□ 1.3
CCDC43-205ENST00000592333 DDX4Q9NQI0 724 aaKnown RBP23.2■■□□□ 1.3
CCDC43-205ENST00000592333 TNNQ9UQP3 1299 aa23.2■■□□□ 1.3
CCDC43-205ENST00000592333 ZHX2Q9Y6X8 837 aa23.2■■□□□ 1.3
CCDC43-205ENST00000592333 MCAMP43121 646 aa23.19■■□□□ 1.3
CCDC43-205ENST00000592333 CCDC158Q5M9N0 1113 aa23.19■■□□□ 1.3
CCDC43-205ENST00000592333 FTSJ3Q8IY81 847 aaKnown RBP23.19■■□□□ 1.3
CCDC43-205ENST00000592333 HNRNPUQ00839 825 aaKnown RBP eCLIP23.18■■□□□ 1.3
CCDC43-205ENST00000592333 PICALMQ13492 652 aa23.18■■□□□ 1.3
CCDC43-205ENST00000592333 TNNI3KQ59H18 835 aa23.18■■□□□ 1.3
CCDC43-205ENST00000592333 GPAT2Q6NUI2 795 aa23.18■■□□□ 1.3
CCDC43-205ENST00000592333 OSBPL5Q9H0X9 879 aaPredicted RBP23.18■■□□□ 1.3
CCDC43-205ENST00000592333 RAI14Q9P0K7 980 aa23.18■■□□□ 1.3
CCDC43-205ENST00000592333 LRP2BPQ9P2M1 347 aa23.18■■□□□ 1.3
CCDC43-205ENST00000592333 NOP58Q9Y2X3 529 aaKnown RBP23.18■■□□□ 1.3
CCDC43-205ENST00000592333 FPGT-TNNI3KV9GXZ4 949 aa23.18■■□□□ 1.3
CCDC43-205ENST00000592333 KIAA0100Q14667 2235 aaKnown RBP23.17■■□□□ 1.3
CCDC43-205ENST00000592333 PLCG2P16885 1265 aa23.17■■□□□ 1.3
CCDC43-205ENST00000592333 PSMC4P43686 418 aa23.17■■□□□ 1.3
CCDC43-205ENST00000592333 GCC1Q96CN9 775 aa23.17■■□□□ 1.3
CCDC43-205ENST00000592333 ARHGAP39Q9C0H5 1083 aa23.17■■□□□ 1.3
CCDC43-205ENST00000592333 SRRDQ9UH36 339 aa23.17■■□□□ 1.3
CCDC43-205ENST00000592333 CPA4Q9UI42 421 aa23.17■■□□□ 1.3
CCDC43-205ENST00000592333 ZBTB7BO15156 539 aaPredicted RBP23.16■■□□□ 1.3
CCDC43-205ENST00000592333 BAG3O95817 575 aa23.16■■□□□ 1.3
CCDC43-205ENST00000592333 BCRP11274 1271 aa23.16■■□□□ 1.3
CCDC43-205ENST00000592333 PI16Q6UXB8 463 aa23.16■■□□□ 1.3
CCDC43-205ENST00000592333 TBC1D9Q6ZT07 1266 aa23.16■■□□□ 1.3
CCDC43-205ENST00000592333 NOL10Q9BSC4 688 aaKnown RBP23.16■■□□□ 1.3
CCDC43-205ENST00000592333 DHX36Q9H2U1 1008 aaKnown RBP23.16■■□□□ 1.3
CCDC43-205ENST00000592333 HERC5Q9UII4 1024 aaKnown RBP23.16■■□□□ 1.3
CCDC43-205ENST00000592333 SURF6O75683 361 aaKnown RBP23.15■■□□□ 1.3
CCDC43-205ENST00000592333 OS9Q13438 667 aaPredicted RBP23.15■■□□□ 1.3
CCDC43-205ENST00000592333 TTC39AQ5SRH9 613 aa23.15■■□□□ 1.3
CCDC43-205ENST00000592333 TMED8Q6PL24 325 aaPredicted RBP23.15■■□□□ 1.3
CCDC43-205ENST00000592333 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
CCDC43-205ENST00000592333 DOCK1Q14185 1865 aa23.15■■□□□ 1.3
CCDC43-205ENST00000592333 EN2P19622 333 aaPredicted RBP23.14■■□□□ 1.29
CCDC43-205ENST00000592333 PPP4CP60510 307 aa23.14■■□□□ 1.29
CCDC43-205ENST00000592333 TRIM47Q96LD4 638 aa23.14■■□□□ 1.29
CCDC43-205ENST00000592333 FMNL1O95466 1100 aaPredicted RBP23.13■■□□□ 1.29
CCDC43-205ENST00000592333 FCGRTP55899 365 aa23.13■■□□□ 1.29
CCDC43-205ENST00000592333 SLC4A8Q2Y0W8 1093 aa23.13■■□□□ 1.29
CCDC43-205ENST00000592333 NAA16Q6N069 864 aaPredicted RBP23.13■■□□□ 1.29
CCDC43-205ENST00000592333 MIER1Q8N108 512 aa23.13■■□□□ 1.29
CCDC43-205ENST00000592333 PROCA1Q8NCQ7 364 aaPredicted RBP23.13■■□□□ 1.29
CCDC43-205ENST00000592333 PI4KBQ9UBF8 816 aa23.13■■□□□ 1.29
CCDC43-205ENST00000592333 ZBED9Q6R2W3 1325 aa23.12■■□□□ 1.29
CCDC43-205ENST00000592333 OSBPP22059 807 aa23.12■■□□□ 1.29
CCDC43-205ENST00000592333 CERS3Q8IU89 383 aa23.12■■□□□ 1.29
CCDC43-205ENST00000592333 ITPRIPQ8IWB1 547 aa23.12■■□□□ 1.29
CCDC43-205ENST00000592333 TEX11Q8IYF3 940 aa23.12■■□□□ 1.29
CCDC43-205ENST00000592333 DBNDD2Q9BQY9 259 aa23.12■■□□□ 1.29
CCDC43-205ENST00000592333 AGTPBP1Q9UPW5 1226 aa23.12■■□□□ 1.29
CCDC43-205ENST00000592333 BRCA2P51587 3418 aa23.11■■□□□ 1.29
CCDC43-205ENST00000592333 CYP2C8P10632 490 aa23.11■■□□□ 1.29
CCDC43-205ENST00000592333 CAPN2P17655 700 aa23.11■■□□□ 1.29
CCDC43-205ENST00000592333 CTGFP29279 349 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms