RNA–Protein interactions for RNA: ENST00000592158.1

SMARCA4-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 409 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-218ENST00000592158 SPDYE2Q495Y8 402 aa11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 POTEBQ6S5H4 581 aa11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 ASCL5Q7RTU5 278 aa11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 CERS5Q8N5B7 392 aa11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 SMCR8Q8TEV9 937 aaPredicted RBP11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 FAM89AQ96GI7 184 aa11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 THUMPD2Q9BTF0 503 aaKnown RBP11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 SLC28A3Q9HAS3 691 aa11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 GBF1Q92538 1859 aa11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 PLXNB2O15031 1838 aa11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 FAM208BQ5VWN6 2430 aa11.69□□□□□ -0.54
SMARCA4-218ENST00000592158 DMXL1Q9Y485 3027 aa11.68□□□□□ -0.54
SMARCA4-218ENST00000592158 TRIM26Q12899 539 aaPredicted RBP11.68□□□□□ -0.54
SMARCA4-218ENST00000592158 RAB30Q15771 203 aa11.68□□□□□ -0.54
SMARCA4-218ENST00000592158 ST3GAL2Q16842 350 aa11.68□□□□□ -0.54
SMARCA4-218ENST00000592158 TXNRD3Q86VQ6 643 aa11.68□□□□□ -0.54
SMARCA4-218ENST00000592158 MTCH2Q9Y6C9 303 aa11.68□□□□□ -0.54
SMARCA4-218ENST00000592158 DNAH14Q0VDD8 3507 aa11.68□□□□□ -0.54
SMARCA4-218ENST00000592158 RPAP1Q9BWH6 1393 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-218ENST00000592158 DNM1LO00429 736 aa11.67□□□□□ -0.54
SMARCA4-218ENST00000592158 GTPBP6O43824 516 aaPredicted RBP11.67□□□□□ -0.54
SMARCA4-218ENST00000592158 MORC1Q86VD1 984 aa11.67□□□□□ -0.54
SMARCA4-218ENST00000592158 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.67□□□□□ -0.546e-10■□□□□ 8.3
SMARCA4-218ENST00000592158 TDRD3Q9H7E2 651 aaKnown RBP11.67□□□□□ -0.54
SMARCA4-218ENST00000592158 TRPC6Q9Y210 931 aa11.67□□□□□ -0.54
SMARCA4-218ENST00000592158 COL4A6Q14031 1691 aa11.67□□□□□ -0.54
SMARCA4-218ENST00000592158 GVINP1Q7Z2Y8 2422 aa11.66□□□□□ -0.54
SMARCA4-218ENST00000592158 RAG1P15918 1043 aa11.66□□□□□ -0.54
SMARCA4-218ENST00000592158 INPP5BP32019 993 aa11.66□□□□□ -0.54
SMARCA4-218ENST00000592158 TNNI2P48788 182 aa11.66□□□□□ -0.54
SMARCA4-218ENST00000592158 FAM110CQ1W6H9 321 aa11.66□□□□□ -0.54
SMARCA4-218ENST00000592158 RTL5Q5HYW3 569 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-218ENST00000592158 DGLUCYQ7Z3D6 616 aa11.66□□□□□ -0.54
SMARCA4-218ENST00000592158 ATOH1Q92858 354 aaPredicted RBP11.66□□□□□ -0.54
SMARCA4-218ENST00000592158 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
SMARCA4-218ENST00000592158 ZNF292O60281 2723 aa11.66□□□□□ -0.54
SMARCA4-218ENST00000592158 SNX17Q15036 470 aa11.65□□□□□ -0.54
SMARCA4-218ENST00000592158 SAMD1Q6SPF0 538 aaPredicted RBP11.65□□□□□ -0.54
SMARCA4-218ENST00000592158 MCM10Q7L590 875 aa11.65□□□□□ -0.54
SMARCA4-218ENST00000592158 LRP10Q7Z4F1 713 aa11.65□□□□□ -0.54
SMARCA4-218ENST00000592158 MIS18AQ9NYP9 233 aa11.65□□□□□ -0.54
SMARCA4-218ENST00000592158 DAGLAQ9Y4D2 1042 aa11.65□□□□□ -0.54
SMARCA4-218ENST00000592158 TACC3Q9Y6A5 838 aa11.65□□□□□ -0.54
SMARCA4-218ENST00000592158 VPS13AQ96RL7 3174 aa11.65□□□□□ -0.54
SMARCA4-218ENST00000592158 USP24Q9UPU5 2620 aa11.64□□□□□ -0.55
SMARCA4-218ENST00000592158 WDR87Q6ZQQ6 2873 aa11.64□□□□□ -0.55
SMARCA4-218ENST00000592158 IRS4O14654 1257 aaPredicted RBP11.64□□□□□ -0.55
SMARCA4-218ENST00000592158 HOXB3P14651 431 aaPredicted RBP11.64□□□□□ -0.55
SMARCA4-218ENST00000592158 ZKSCAN1P17029 563 aaPredicted RBP11.64□□□□□ -0.55
SMARCA4-218ENST00000592158 POU3F3P20264 500 aaPredicted RBP11.64□□□□□ -0.55
SMARCA4-218ENST00000592158 FASTKD5Q7L8L6 764 aaKnown RBP11.64□□□□□ -0.55
SMARCA4-218ENST00000592158 YBX2Q9Y2T7 364 aaKnown RBP11.64□□□□□ -0.55
SMARCA4-218ENST00000592158 DMDP11532 3685 aa11.64□□□□□ -0.55
SMARCA4-218ENST00000592158 FLNBO75369 2602 aaKnown RBP11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 TECTAO75443 2155 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 PRR23AA6NEV1 266 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 PROB1E7EW31 1015 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 RFXAPO00287 272 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 CXCL11O14625 94 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 CCT4P50991 539 aaKnown RBP11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 TLE2Q04725 743 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 KRT40Q6A162 431 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 GADL1Q6ZQY3 521 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 COPS6Q7L5N1 327 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 ANKRD18AQ8IVF6 992 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 LPAR1Q92633 364 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 SLC45A1Q9Y2W3 748 aa11.63□□□□□ -0.55
SMARCA4-218ENST00000592158 KIAA0355O15063 1070 aa11.62□□□□□ -0.55
SMARCA4-218ENST00000592158 ANXA1P04083 346 aa11.62□□□□□ -0.55
SMARCA4-218ENST00000592158 CLTBP09497 229 aa11.62□□□□□ -0.55
SMARCA4-218ENST00000592158 XRCC5P13010 732 aaKnown RBP11.62□□□□□ -0.55
SMARCA4-218ENST00000592158 GJC2Q5T442 439 aaPredicted RBP11.62□□□□□ -0.55
SMARCA4-218ENST00000592158 RASIP1Q5U651 963 aa11.62□□□□□ -0.55
SMARCA4-218ENST00000592158 TRMT44Q8IYL2 757 aaKnown RBP11.62□□□□□ -0.55
SMARCA4-218ENST00000592158 IRF2BPLQ9H1B7 796 aa11.62□□□□□ -0.55
SMARCA4-218ENST00000592158 DACH1Q9UI36 760 aa11.62□□□□□ -0.55
SMARCA4-218ENST00000592158 MYBBP1AQ9BQG0 1328 aaKnown RBP11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 A0A0G2JLL6 359 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 DIAPH1O60610 1272 aaKnown RBP11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 IL9P15248 144 aa11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 KLRK1P26718 216 aa11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 AIMP1Q12904 312 aaKnown RBP11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 DCTN1Q14203 1278 aa11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 TAF7Q15545 349 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 TMEM240Q5SV17 173 aa11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 DCAF15Q66K64 600 aa11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 PPP2R2DQ66LE6 453 aa11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 PRRT2Q7Z6L0 340 aaPredicted RBP11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 RTF1Q92541 710 aaKnown RBP11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 ZNF341Q9BYN7 854 aa11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 DDX20Q9UHI6 824 aaKnown RBP11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 MAST4O15021 2626 aa11.61□□□□□ -0.55
SMARCA4-218ENST00000592158 GAKO14976 1311 aa11.6□□□□□ -0.55
SMARCA4-218ENST00000592158 CCL14Q16627 93 aa11.6□□□□□ -0.55
SMARCA4-218ENST00000592158 PROSER3Q2NL68 480 aa11.6□□□□□ -0.55
SMARCA4-218ENST00000592158 MIGA2Q7L4E1 593 aa11.6□□□□□ -0.55
SMARCA4-218ENST00000592158 RMDN1Q96DB5 314 aa11.6□□□□□ -0.55
SMARCA4-218ENST00000592158 HOOK2Q96ED9 719 aa11.6□□□□□ -0.55
SMARCA4-218ENST00000592158 CCDC85AQ96PX6 553 aaPredicted RBP11.6□□□□□ -0.55
SMARCA4-218ENST00000592158 NUDT12Q9BQG2 462 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 256.9 ms