RNA–Protein interactions for RNA: ENST00000592023.5

ERCC1-213, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-213ENST00000592023 ATRNL1Q5VV63 1379 aa18.59■□□□□ 0.57
ERCC1-213ENST00000592023 SPDYE5A6NIY4 337 aa18.59■□□□□ 0.57
ERCC1-213ENST00000592023 ALDH1A1P00352 501 aa18.59■□□□□ 0.57
ERCC1-213ENST00000592023 INPP5BP32019 993 aa18.59■□□□□ 0.57
ERCC1-213ENST00000592023 INHBEP58166 350 aa18.59■□□□□ 0.57
ERCC1-213ENST00000592023 NAA16Q6N069 864 aaPredicted RBP18.59■□□□□ 0.57
ERCC1-213ENST00000592023 PIH1D3Q9NQM4 214 aaKnown RBP18.59■□□□□ 0.57
ERCC1-213ENST00000592023 SH3BP5LQ7L8J4 393 aa18.58■□□□□ 0.56
ERCC1-213ENST00000592023 ZNF296Q8WUU4 475 aaPredicted RBP18.58■□□□□ 0.56
ERCC1-213ENST00000592023 KIF1BPQ96EK5 621 aa18.58■□□□□ 0.56
ERCC1-213ENST00000592023 R3HDMLQ9H3Y0 253 aa18.58■□□□□ 0.56
ERCC1-213ENST00000592023 NDUFB9Q9Y6M9 179 aa18.58■□□□□ 0.56
ERCC1-213ENST00000592023 CCL15-CCL14A0A0B4J2E2 113 aa18.57■□□□□ 0.56
ERCC1-213ENST00000592023 DDTLA6NHG4 134 aaPredicted RBP18.57■□□□□ 0.56
ERCC1-213ENST00000592023 GPR25O00155 361 aa18.57■□□□□ 0.56
ERCC1-213ENST00000592023 CCL15Q16663 113 aa18.57■□□□□ 0.56
ERCC1-213ENST00000592023 ERO1BQ86YB8 467 aa18.57■□□□□ 0.56
ERCC1-213ENST00000592023 CLASRPQ8N2M8 674 aaKnown RBP18.57■□□□□ 0.56
ERCC1-213ENST00000592023 NOL10Q9BSC4 688 aaKnown RBP18.57■□□□□ 0.56
ERCC1-213ENST00000592023 CFHR5Q9BXR6 569 aa18.57■□□□□ 0.56
ERCC1-213ENST00000592023 ADGRA1Q86SQ6 560 aa18.56■□□□□ 0.56
ERCC1-213ENST00000592023 TEX11Q8IYF3 940 aa18.56■□□□□ 0.56
ERCC1-213ENST00000592023 BRI3BPQ8WY22 251 aa18.56■□□□□ 0.56
ERCC1-213ENST00000592023 MS4A4AQ96JQ5 239 aa18.56■□□□□ 0.56
ERCC1-213ENST00000592023 PTPN18Q99952 460 aa18.56■□□□□ 0.56
ERCC1-213ENST00000592023 AATFQ9NY61 560 aaKnown RBP eCLIP18.56■□□□□ 0.56
ERCC1-213ENST00000592023 DOCK1Q14185 1865 aa18.56■□□□□ 0.56
ERCC1-213ENST00000592023 CDK5RAP2Q96SN8 1893 aa18.56■□□□□ 0.56
ERCC1-213ENST00000592023 COL2A1P02458 1487 aaPredicted RBP18.55■□□□□ 0.56
ERCC1-213ENST00000592023 TESPA1A2RU30 521 aaPredicted RBP18.55■□□□□ 0.56
ERCC1-213ENST00000592023 RAB11FIP3O75154 756 aa18.55■□□□□ 0.56
ERCC1-213ENST00000592023 IDH1O75874 414 aaKnown RBP18.55■□□□□ 0.56
ERCC1-213ENST00000592023 SLURP2P0DP57 97 aa18.55■□□□□ 0.56
ERCC1-213ENST00000592023 GTF2A2P52657 109 aa18.55■□□□□ 0.56
ERCC1-213ENST00000592023 PPIL2Q13356 520 aa18.55■□□□□ 0.56
ERCC1-213ENST00000592023 OTUD7BQ6GQQ9 843 aa18.55■□□□□ 0.56
ERCC1-213ENST00000592023 CTU1Q7Z7A3 348 aaKnown RBP18.55■□□□□ 0.56
ERCC1-213ENST00000592023 SH3RF3Q8TEJ3 882 aaPredicted RBP18.55■□□□□ 0.56
ERCC1-213ENST00000592023 ZNF112Q9UJU3 913 aa18.55■□□□□ 0.56
ERCC1-213ENST00000592023 FOCADQ5VW36 1801 aa18.54■□□□□ 0.56
ERCC1-213ENST00000592023 IRF6O14896 467 aa18.54■□□□□ 0.56
ERCC1-213ENST00000592023 MAP4K4O95819 1239 aaPredicted RBP18.54■□□□□ 0.56
ERCC1-213ENST00000592023 IFIT2P09913 472 aaKnown RBP18.54■□□□□ 0.56
ERCC1-213ENST00000592023 CRHR2Q13324 411 aa18.54■□□□□ 0.56
ERCC1-213ENST00000592023 NOL9Q5SY16 702 aaKnown RBP18.54■□□□□ 0.56
ERCC1-213ENST00000592023 OSBPL5Q9H0X9 879 aaPredicted RBP18.54■□□□□ 0.56
ERCC1-213ENST00000592023 ANTXR1Q9H6X2 564 aa18.54■□□□□ 0.56
ERCC1-213ENST00000592023 FKTNO75072 461 aa18.53■□□□□ 0.56
ERCC1-213ENST00000592023 BAG3O95817 575 aa18.53■□□□□ 0.56
ERCC1-213ENST00000592023 CYP7A1P22680 504 aa18.53■□□□□ 0.56
ERCC1-213ENST00000592023 RRP1P56182 461 aaKnown RBP18.53■□□□□ 0.56
ERCC1-213ENST00000592023 NOM1Q5C9Z4 860 aaKnown RBP18.53■□□□□ 0.56
ERCC1-213ENST00000592023 SIPA1L1O43166 1804 aa18.52■□□□□ 0.56
ERCC1-213ENST00000592023 CCDC85CA6NKD9 419 aa18.52■□□□□ 0.56
ERCC1-213ENST00000592023 FAM196BA6NMK8 535 aa18.52■□□□□ 0.56
ERCC1-213ENST00000592023 NPM3O75607 178 aaKnown RBP18.52■□□□□ 0.56
ERCC1-213ENST00000592023 CETPP11597 493 aa18.52■□□□□ 0.56
ERCC1-213ENST00000592023 PPATQ06203 517 aa18.52■□□□□ 0.56
ERCC1-213ENST00000592023 SNAPC2Q13487 334 aa18.52■□□□□ 0.56
ERCC1-213ENST00000592023 FAM43AQ8N2R8 423 aa18.52■□□□□ 0.56
ERCC1-213ENST00000592023 MAGEB6Q8N7X4 407 aa18.52■□□□□ 0.56
ERCC1-213ENST00000592023 PHF20L1A8MW92 1017 aa18.51■□□□□ 0.55
ERCC1-213ENST00000592023 PLCG2P16885 1265 aa18.51■□□□□ 0.55
ERCC1-213ENST00000592023 DYNLL1P63167 89 aaKnown RBP18.51■□□□□ 0.55
ERCC1-213ENST00000592023 TAF1CQ15572 869 aaPredicted RBP18.51■□□□□ 0.55
ERCC1-213ENST00000592023 MAPKAPK5Q8IW41 473 aa18.51■□□□□ 0.55
ERCC1-213ENST00000592023 SCYL3Q8IZE3 742 aa18.51■□□□□ 0.55
ERCC1-213ENST00000592023 DNAJC2Q99543 621 aaKnown RBP18.51■□□□□ 0.55
ERCC1-213ENST00000592023 FLT1P17948 1338 aa18.5■□□□□ 0.55
ERCC1-213ENST00000592023 IGSF3O75054 1194 aa18.5■□□□□ 0.55
ERCC1-213ENST00000592023 PPP4CP60510 307 aa18.5■□□□□ 0.55
ERCC1-213ENST00000592023 MAP3K12Q12852 859 aa18.5■□□□□ 0.55
ERCC1-213ENST00000592023 MIGA1Q8NAN2 632 aa18.5■□□□□ 0.55
ERCC1-213ENST00000592023 TGFBRAP1Q8WUH2 860 aa18.5■□□□□ 0.55
ERCC1-213ENST00000592023 LRRCC1Q9C099 1032 aa18.5■□□□□ 0.55
ERCC1-213ENST00000592023 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.5■□□□□ 0.55
ERCC1-213ENST00000592023 PICK1Q9NRD5 415 aa18.5■□□□□ 0.55
ERCC1-213ENST00000592023 ATAD5Q96QE3 1844 aa18.5■□□□□ 0.55
ERCC1-213ENST00000592023 BTBD19C9JJ37 291 aa18.49■□□□□ 0.55
ERCC1-213ENST00000592023 MAP3K10Q02779 954 aa18.49■□□□□ 0.55
ERCC1-213ENST00000592023 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.49■□□□□ 0.55
ERCC1-213ENST00000592023 GOLIM4O00461 696 aa18.48■□□□□ 0.55
ERCC1-213ENST00000592023 SMARCA5O60264 1052 aaPredicted RBP18.48■□□□□ 0.55
ERCC1-213ENST00000592023 TTF1Q15361 905 aaPredicted RBP18.48■□□□□ 0.55
ERCC1-213ENST00000592023 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.48■□□□□ 0.55
ERCC1-213ENST00000592023 ZFYVE28Q9HCC9 887 aa18.48■□□□□ 0.55
ERCC1-213ENST00000592023 KCNH4Q9UQ05 1017 aa18.48■□□□□ 0.55
ERCC1-213ENST00000592023 PHIPQ8WWQ0 1821 aa18.48■□□□□ 0.55
ERCC1-213ENST00000592023 TBC1D12O60347 775 aa18.47■□□□□ 0.55
ERCC1-213ENST00000592023 PTPRAP18433 802 aa18.47■□□□□ 0.55
ERCC1-213ENST00000592023 SLC4A8Q2Y0W8 1093 aa18.47■□□□□ 0.55
ERCC1-213ENST00000592023 CCDC84Q86UT8 332 aaPredicted RBP18.47■□□□□ 0.55
ERCC1-213ENST00000592023 CD99L2Q8TCZ2 262 aa18.47■□□□□ 0.55
ERCC1-213ENST00000592023 EDC3Q96F86 508 aaKnown RBP18.47■□□□□ 0.55
ERCC1-213ENST00000592023 SAP30BPQ9UHR5 308 aaKnown RBP18.47■□□□□ 0.55
ERCC1-213ENST00000592023 ZHX2Q9Y6X8 837 aa18.47■□□□□ 0.55
ERCC1-213ENST00000592023 NAV1Q8NEY1 1877 aa18.47■□□□□ 0.55
ERCC1-213ENST00000592023 PTPRFP10586 1907 aa18.47■□□□□ 0.55
ERCC1-213ENST00000592023 DDX60LQ5H9U9 1706 aaKnown RBP18.46■□□□□ 0.55
ERCC1-213ENST00000592023 CTNND1O60716 968 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms