RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 FOXN1O15353 648 aa14.01□□□□□ -0.17
VMP1-211ENST00000591315 GJA5P36382 358 aa14.01□□□□□ -0.17
VMP1-211ENST00000591315 PPP4CP60510 307 aa14.01□□□□□ -0.17
VMP1-211ENST00000591315 MAP3K12Q12852 859 aa14.01□□□□□ -0.17
VMP1-211ENST00000591315 LNPKQ9C0E8 428 aa14.01□□□□□ -0.17
VMP1-211ENST00000591315 ELP3Q9H9T3 547 aa14.01□□□□□ -0.17
VMP1-211ENST00000591315 WBP1LQ9NX94 342 aa14.01□□□□□ -0.17
VMP1-211ENST00000591315 ATRNL1Q5VV63 1379 aa14□□□□□ -0.17
VMP1-211ENST00000591315 SALL3Q9BXA9 1300 aa14□□□□□ -0.17
VMP1-211ENST00000591315 ZNF532Q9HCE3 1301 aa14□□□□□ -0.17
VMP1-211ENST00000591315 TCRBV5S4A2TA0A5A2 114 aa14□□□□□ -0.17
VMP1-211ENST00000591315 ENTPD3O75355 529 aa14□□□□□ -0.17
VMP1-211ENST00000591315 INPP5BP32019 993 aa14□□□□□ -0.17
VMP1-211ENST00000591315 MAP2K2P36507 400 aa14□□□□□ -0.17
VMP1-211ENST00000591315 AAMPQ13685 434 aa14□□□□□ -0.17
VMP1-211ENST00000591315 SLC9C2Q5TAH2 1124 aa14□□□□□ -0.17
VMP1-211ENST00000591315 MAPKAPK5Q8IW41 473 aa14□□□□□ -0.17
VMP1-211ENST00000591315 ZSCAN29Q8IWY8 852 aaPredicted RBP14□□□□□ -0.17
VMP1-211ENST00000591315 SMC5Q8IY18 1101 aa14□□□□□ -0.17
VMP1-211ENST00000591315 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14□□□□□ -0.17
VMP1-211ENST00000591315 PI4K2BQ8TCG2 481 aa14□□□□□ -0.17
VMP1-211ENST00000591315 TGFBRAP1Q8WUH2 860 aa14□□□□□ -0.17
VMP1-211ENST00000591315 ZKSCAN4Q969J2 545 aaPredicted RBP14□□□□□ -0.17
VMP1-211ENST00000591315 CCDC102AQ96A19 550 aa14□□□□□ -0.17
VMP1-211ENST00000591315 GCC1Q96CN9 775 aa14□□□□□ -0.17
VMP1-211ENST00000591315 SLC10A4Q96EP9 437 aa14□□□□□ -0.17
VMP1-211ENST00000591315 RWDD1Q9H446 243 aaPredicted RBP14□□□□□ -0.17
VMP1-211ENST00000591315 TSKSQ9UJT2 592 aa14□□□□□ -0.17
VMP1-211ENST00000591315 RPAP1Q9BWH6 1393 aaPredicted RBP13.99□□□□□ -0.17
VMP1-211ENST00000591315 IREB2P48200 963 aaKnown RBP13.99□□□□□ -0.17
VMP1-211ENST00000591315 MAP3K9P80192 1104 aa13.99□□□□□ -0.17
VMP1-211ENST00000591315 NOGQ13253 232 aa13.99□□□□□ -0.17
VMP1-211ENST00000591315 VGLL4Q14135 290 aa13.99□□□□□ -0.17
VMP1-211ENST00000591315 TTF1Q15361 905 aaPredicted RBP13.99□□□□□ -0.17
VMP1-211ENST00000591315 SLC4A8Q2Y0W8 1093 aa13.99□□□□□ -0.17
VMP1-211ENST00000591315 WNK4Q96J92 1243 aa13.99□□□□□ -0.17
VMP1-211ENST00000591315 CSRNP1Q96S65 589 aa13.99□□□□□ -0.17
VMP1-211ENST00000591315 NOL10Q9BSC4 688 aaKnown RBP13.99□□□□□ -0.17
VMP1-211ENST00000591315 SAP30BPQ9UHR5 308 aaKnown RBP13.99□□□□□ -0.17
VMP1-211ENST00000591315 MYH7P12883 1935 aa13.99□□□□□ -0.17
VMP1-211ENST00000591315 BAG3O95817 575 aa13.98□□□□□ -0.17
VMP1-211ENST00000591315 MX1P20591 662 aa13.98□□□□□ -0.17
VMP1-211ENST00000591315 SPRYD7Q5W111 196 aa13.98□□□□□ -0.17
VMP1-211ENST00000591315 WRNIP1Q96S55 665 aa13.98□□□□□ -0.17
VMP1-211ENST00000591315 RIOK1Q9BRS2 568 aaKnown RBP13.98□□□□□ -0.17
VMP1-211ENST00000591315 OSBPL5Q9H0X9 879 aaPredicted RBP13.98□□□□□ -0.17
VMP1-211ENST00000591315 SIPA1L1O43166 1804 aa13.97□□□□□ -0.17
VMP1-211ENST00000591315 FOCADQ5VW36 1801 aa13.97□□□□□ -0.17
VMP1-211ENST00000591315 FLT1P17948 1338 aa13.97□□□□□ -0.17
VMP1-211ENST00000591315 ADD2P35612 726 aa13.97□□□□□ -0.17
VMP1-211ENST00000591315 EVX2Q03828 476 aa13.97□□□□□ -0.17
VMP1-211ENST00000591315 RRP1BQ14684 758 aaKnown RBP13.97□□□□□ -0.17
VMP1-211ENST00000591315 ANKRD13AQ8IZ07 590 aa13.97□□□□□ -0.17
VMP1-211ENST00000591315 LCORLQ8N3X6 602 aa13.97□□□□□ -0.17
VMP1-211ENST00000591315 GPATCH3Q96I76 525 aa13.97□□□□□ -0.17
VMP1-211ENST00000591315 ZNF341Q9BYN7 854 aa13.97□□□□□ -0.17
VMP1-211ENST00000591315 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.97□□□□□ -0.17
VMP1-211ENST00000591315 SNCAIPQ9Y6H5 919 aa13.97□□□□□ -0.17
VMP1-211ENST00000591315 MAGEB6P1A0A0J9YX57 407 aa13.96□□□□□ -0.17
VMP1-211ENST00000591315 PHF20L1A8MW92 1017 aa13.96□□□□□ -0.17
VMP1-211ENST00000591315 PRKAB2O43741 272 aa13.96□□□□□ -0.17
VMP1-211ENST00000591315 MAP2K1Q02750 393 aaPredicted RBP13.96□□□□□ -0.17
VMP1-211ENST00000591315 OPTNQ96CV9 577 aa13.96□□□□□ -0.17
VMP1-211ENST00000591315 ARMT1Q9H993 441 aa13.96□□□□□ -0.17
VMP1-211ENST00000591315 ZNF112Q9UJU3 913 aa13.96□□□□□ -0.17
VMP1-211ENST00000591315 PALD1Q9ULE6 856 aa13.96□□□□□ -0.17
VMP1-211ENST00000591315 MYH1P12882 1939 aa13.96□□□□□ -0.18
VMP1-211ENST00000591315 TTC41PQ6P2S7 1318 aa13.95□□□□□ -0.18
VMP1-211ENST00000591315 MBD4O95243 580 aa13.95□□□□□ -0.18
VMP1-211ENST00000591315 HSPA8P11142 646 aaKnown RBP13.95□□□□□ -0.18
VMP1-211ENST00000591315 PLCG2P16885 1265 aa13.95□□□□□ -0.18
VMP1-211ENST00000591315 PDE1AP54750 535 aa13.95□□□□□ -0.18
VMP1-211ENST00000591315 NUCB1Q02818 461 aa13.95□□□□□ -0.18
VMP1-211ENST00000591315 SHROOM1Q2M3G4 852 aaPredicted RBP13.95□□□□□ -0.18
VMP1-211ENST00000591315 DCAF15Q66K64 600 aa13.95□□□□□ -0.18
VMP1-211ENST00000591315 CCDC84Q86UT8 332 aaPredicted RBP13.95□□□□□ -0.18
VMP1-211ENST00000591315 CHD1LQ86WJ1 897 aa13.95□□□□□ -0.18
VMP1-211ENST00000591315 OTUD5Q96G74 571 aa13.95□□□□□ -0.18
VMP1-211ENST00000591315 ZBTB47Q9UFB7 747 aaPredicted RBP13.95□□□□□ -0.18
VMP1-211ENST00000591315 STAP2Q9UGK3 403 aa13.95□□□□□ -0.18
VMP1-211ENST00000591315 SMIM22K7EJ46 135 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 GLRX3O76003 335 aaKnown RBP13.94□□□□□ -0.18
VMP1-211ENST00000591315 USP5P45974 858 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 LBX1P52954 281 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 MAP3K10Q02779 954 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 KBTBD3Q8NAB2 608 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 SDR42E1Q8WUS8 393 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 AIDAQ96BJ3 306 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 PUS7LQ9H0K6 701 aaKnown RBP13.94□□□□□ -0.18
VMP1-211ENST00000591315 DNAJC18Q9H819 358 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 RNF186Q9NXI6 227 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 CSADQ9Y600 493 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 CASP8AP2Q9UKL3 1982 aa13.94□□□□□ -0.18
VMP1-211ENST00000591315 BAZ2AQ9UIF9 1905 aaKnown RBP13.94□□□□□ -0.18
VMP1-211ENST00000591315 IGSF3O75054 1194 aa13.93□□□□□ -0.18
VMP1-211ENST00000591315 TRPA1O75762 1119 aa13.93□□□□□ -0.18
VMP1-211ENST00000591315 CYP2D6P10635 497 aa13.93□□□□□ -0.18
VMP1-211ENST00000591315 PDE4AP27815 886 aa13.93□□□□□ -0.18
VMP1-211ENST00000591315 JAG1P78504 1218 aa13.93□□□□□ -0.18
VMP1-211ENST00000591315 UBE3CQ15386 1083 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms