RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 SGSM2O43147 1006 aa20.45■□□□□ 0.86
RPRD1A-209ENST00000590898 USP5P45974 858 aa20.45■□□□□ 0.86
RPRD1A-209ENST00000590898 RASA3Q14644 834 aa20.45■□□□□ 0.86
RPRD1A-209ENST00000590898 SLC4A4Q9Y6R1 1079 aa20.45■□□□□ 0.86
RPRD1A-209ENST00000590898 RBM46Q8TBY0 533 aaKnown RBP20.44■□□□□ 0.86
RPRD1A-209ENST00000590898 DDX4Q9NQI0 724 aaKnown RBP20.44■□□□□ 0.86
RPRD1A-209ENST00000590898 CNTNAP1P78357 1384 aa20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 MAP1SQ66K74 1059 aaPredicted RBP20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 ZNF589Q86UQ0 364 aaPredicted RBP20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 DDRGK1Q96HY6 314 aa20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 DCP1AQ9NPI6 582 aaPredicted RBP20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 BAZ2AQ9UIF9 1905 aaKnown RBP20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 COL2A1P02458 1487 aaPredicted RBP20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 FLT1P17948 1338 aa20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 GSG1L2A8MUP6 293 aa20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 PRKAB2O43741 272 aa20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 SEC24BO95487 1268 aa20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 CCDC129Q6ZRS4 1044 aa20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 SDR42E1Q8WUS8 393 aa20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 ESYT1Q9BSJ8 1104 aa20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 OSBPL5Q9H0X9 879 aaPredicted RBP20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 DHX36Q9H2U1 1008 aaKnown RBP20.43■□□□□ 0.86
RPRD1A-209ENST00000590898 TCP10Q12799 353 aa20.42■□□□□ 0.86
RPRD1A-209ENST00000590898 PICALMQ13492 652 aa20.42■□□□□ 0.86
RPRD1A-209ENST00000590898 USP48Q86UV5 1035 aa20.42■□□□□ 0.86
RPRD1A-209ENST00000590898 MAPKAPK5Q8IW41 473 aa20.42■□□□□ 0.86
RPRD1A-209ENST00000590898 SMC1BQ8NDV3 1235 aa20.42■□□□□ 0.86
RPRD1A-209ENST00000590898 NACAP1Q9BZK3 213 aa20.42■□□□□ 0.86
RPRD1A-209ENST00000590898 ATRNL1Q5VV63 1379 aa20.41■□□□□ 0.86
RPRD1A-209ENST00000590898 HSPD1P10809 573 aaKnown RBP20.41■□□□□ 0.86
RPRD1A-209ENST00000590898 ALX1Q15699 326 aa20.41■□□□□ 0.86
RPRD1A-209ENST00000590898 ITGBL1O95965 494 aaPredicted RBP20.41■□□□□ 0.86
RPRD1A-209ENST00000590898 ZFPM1Q8IX07 1006 aa20.41■□□□□ 0.86
RPRD1A-209ENST00000590898 IFNL3Q8IZI9 196 aa20.41■□□□□ 0.86
RPRD1A-209ENST00000590898 TEPSINQ96N21 525 aa20.41■□□□□ 0.86
RPRD1A-209ENST00000590898 GLIS2Q9BZE0 524 aaPredicted RBP20.41■□□□□ 0.86
RPRD1A-209ENST00000590898 IL25Q9H293 177 aa20.41■□□□□ 0.86
RPRD1A-209ENST00000590898 APPP05067 770 aa20.4■□□□□ 0.86
RPRD1A-209ENST00000590898 DSCC1Q9BVC3 393 aa20.4■□□□□ 0.86
RPRD1A-209ENST00000590898 TMEM39BQ9GZU3 492 aa20.4■□□□□ 0.86
RPRD1A-209ENST00000590898 NAV1Q8NEY1 1877 aa20.4■□□□□ 0.86
RPRD1A-209ENST00000590898 FSTL1Q12841 308 aa20.39■□□□□ 0.86
RPRD1A-209ENST00000590898 SUPT20HL1Q3ZLR7 823 aa20.39■□□□□ 0.86
RPRD1A-209ENST00000590898 VPS53Q5VIR6 699 aa20.39■□□□□ 0.86
RPRD1A-209ENST00000590898 HOOK2Q96ED9 719 aa20.39■□□□□ 0.86
RPRD1A-209ENST00000590898 SCAF8Q9UPN6 1271 aaKnown RBP20.39■□□□□ 0.86
RPRD1A-209ENST00000590898 ADM5C9JUS6 153 aa20.39■□□□□ 0.85
RPRD1A-209ENST00000590898 FOXP2O15409 715 aa20.39■□□□□ 0.85
RPRD1A-209ENST00000590898 TTC6Q86TZ1 520 aa20.39■□□□□ 0.85
RPRD1A-209ENST00000590898 ZSCAN29Q8IWY8 852 aaPredicted RBP20.39■□□□□ 0.85
RPRD1A-209ENST00000590898 MCM9Q9NXL9 1143 aa20.39■□□□□ 0.85
RPRD1A-209ENST00000590898 PI4KBQ9UBF8 816 aa20.39■□□□□ 0.85
RPRD1A-209ENST00000590898 ZMYM6O95789 1325 aa20.38■□□□□ 0.85
RPRD1A-209ENST00000590898 EIF5BO60841 1220 aaKnown RBP20.38■□□□□ 0.85
RPRD1A-209ENST00000590898 SBK1Q52WX2 424 aa20.38■□□□□ 0.85
RPRD1A-209ENST00000590898 KIAA1211Q6ZU35 1233 aa20.38■□□□□ 0.85
RPRD1A-209ENST00000590898 SH3BP5LQ7L8J4 393 aa20.38■□□□□ 0.85
RPRD1A-209ENST00000590898 TRPM7Q96QT4 1865 aa20.38■□□□□ 0.85
RPRD1A-209ENST00000590898 TAOK2Q9UL54 1235 aa20.38■□□□□ 0.85
RPRD1A-209ENST00000590898 DDTLA6NHG4 134 aaPredicted RBP20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 AMOTL1Q8IY63 956 aa20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 EPB41L4AQ9HCS5 686 aaPredicted RBP20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 ARPP21Q9UBL0 812 aaPredicted RBP20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 PALD1Q9ULE6 856 aa20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 DDX60LQ5H9U9 1706 aaKnown RBP20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 USP17L12C9JPN9 530 aa20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 USP17L21D6R901 530 aa20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 FGAP02671 866 aa20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 MAP3K10Q02779 954 aa20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 FOXP4Q8IVH2 680 aaPredicted RBP20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 CSRNP1Q96S65 589 aa20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 NAPBQ9H115 298 aa20.37■□□□□ 0.85
RPRD1A-209ENST00000590898 POLR3DP05423 398 aaPredicted RBP20.36■□□□□ 0.85
RPRD1A-209ENST00000590898 HLA-DOAP06340 250 aa20.36■□□□□ 0.85
RPRD1A-209ENST00000590898 TDO2P48775 406 aa20.36■□□□□ 0.85
RPRD1A-209ENST00000590898 NBPF12Q5TAG4 269 aaPredicted RBP20.36■□□□□ 0.85
RPRD1A-209ENST00000590898 CTR9Q6PD62 1173 aa20.36■□□□□ 0.85
RPRD1A-209ENST00000590898 METTL16Q86W50 562 aaKnown RBP20.36■□□□□ 0.85
RPRD1A-209ENST00000590898 CDCA5Q96FF9 252 aa20.36■□□□□ 0.85
RPRD1A-209ENST00000590898 TBC1D12O60347 775 aa20.35■□□□□ 0.85
RPRD1A-209ENST00000590898 NF2P35240 595 aa20.35■□□□□ 0.85
RPRD1A-209ENST00000590898 C12orf60Q5U649 245 aa20.35■□□□□ 0.85
RPRD1A-209ENST00000590898 MAP4K1Q92918 833 aa20.35■□□□□ 0.85
RPRD1A-209ENST00000590898 SAP30BPQ9UHR5 308 aaKnown RBP20.35■□□□□ 0.85
RPRD1A-209ENST00000590898 CTNNA3Q9UI47 895 aa20.35■□□□□ 0.85
RPRD1A-209ENST00000590898 EPB41L2O43491 1005 aaKnown RBP20.35■□□□□ 0.85
RPRD1A-209ENST00000590898 PRAMEF18Q5VWM3 479 aa20.35■□□□□ 0.85
RPRD1A-209ENST00000590898 EHD4Q9H223 541 aa20.35■□□□□ 0.85
RPRD1A-209ENST00000590898 PASKQ96RG2 1323 aa20.34■□□□□ 0.85
RPRD1A-209ENST00000590898 TRAF5O00463 557 aa20.34■□□□□ 0.85
RPRD1A-209ENST00000590898 REC8O95072 547 aa20.34■□□□□ 0.85
RPRD1A-209ENST00000590898 LSG1Q9H089 658 aaKnown RBP20.34■□□□□ 0.85
RPRD1A-209ENST00000590898 HERC5Q9UII4 1024 aaKnown RBP20.34■□□□□ 0.85
RPRD1A-209ENST00000590898 PLCD1P51178 756 aa20.33■□□□□ 0.85
RPRD1A-209ENST00000590898 PTH1RQ03431 593 aa20.33■□□□□ 0.85
RPRD1A-209ENST00000590898 DCAF15Q66K64 600 aa20.33■□□□□ 0.85
RPRD1A-209ENST00000590898 DLK2Q6UY11 383 aa20.33■□□□□ 0.85
RPRD1A-209ENST00000590898 CDAN1Q8IWY9 1227 aa20.33■□□□□ 0.85
RPRD1A-209ENST00000590898 PPP1R12BO60237 982 aaPredicted RBP20.33■□□□□ 0.84
RPRD1A-209ENST00000590898 ANO2Q9NQ90 1003 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms