RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 LRRC2Q9BYS8 371 aa21.38■■□□□ 1.01
CTDP1-205ENST00000590599 RNF41Q9H4P4 317 aaPredicted RBP21.38■■□□□ 1.01
CTDP1-205ENST00000590599 CNNM2Q9H8M5 875 aa21.38■■□□□ 1.01
CTDP1-205ENST00000590599 TPCN1Q9ULQ1 816 aa21.38■■□□□ 1.01
CTDP1-205ENST00000590599 DAGLAQ9Y4D2 1042 aa21.38■■□□□ 1.01
CTDP1-205ENST00000590599 PSME4Q14997 1843 aa21.38■■□□□ 1.01
CTDP1-205ENST00000590599 NEDD4P46934 1319 aa21.38■■□□□ 1.01
CTDP1-205ENST00000590599 DDIT3P35638 169 aa21.38■■□□□ 1.01
CTDP1-205ENST00000590599 STAG1Q8WVM7 1258 aa21.38■■□□□ 1.01
CTDP1-205ENST00000590599 CWC22Q9HCG8 908 aaKnown RBP21.38■■□□□ 1.01
CTDP1-205ENST00000590599 ARPP21Q9UBL0 812 aaPredicted RBP21.38■■□□□ 1.01
CTDP1-205ENST00000590599 ANAPC4Q9UJX5 808 aa21.38■■□□□ 1.01
CTDP1-205ENST00000590599 CIZ1Q9ULV3 898 aaPredicted RBP21.38■■□□□ 1.01
CTDP1-205ENST00000590599 WDR19Q8NEZ3 1342 aa21.37■■□□□ 1.01
CTDP1-205ENST00000590599 PRC1O43663 620 aa21.37■■□□□ 1.01
CTDP1-205ENST00000590599 CHST3Q7LGC8 479 aa21.37■■□□□ 1.01
CTDP1-205ENST00000590599 CDK5RAP2Q96SN8 1893 aa21.37■■□□□ 1.01
CTDP1-205ENST00000590599 KRT23Q9C075 422 aa21.37■■□□□ 1.01
CTDP1-205ENST00000590599 RRAGCQ9HB90 399 aa21.37■■□□□ 1.01
CTDP1-205ENST00000590599 USP17L12C9JPN9 530 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 USP17L21D6R901 530 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 LARGE1O95461 756 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 ME3Q16798 604 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 CTR9Q6PD62 1173 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 BRF1Q92994 677 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 LTBP3Q9NS15 1303 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 YDJCA8MPS7 323 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 B4E1Z4 1266 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 SCNN1DP51172 638 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 TEX11Q8IYF3 940 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 TEKT1Q969V4 418 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 TOMM22Q9NS69 142 aa21.36■■□□□ 1.01
CTDP1-205ENST00000590599 IARSP41252 1262 aaKnown RBP21.35■■□□□ 1.01
CTDP1-205ENST00000590599 KIAA0825Q8IV33 1275 aa21.35■■□□□ 1.01
CTDP1-205ENST00000590599 AMOTL1Q8IY63 956 aa21.35■■□□□ 1.01
CTDP1-205ENST00000590599 NIM1KQ8IY84 436 aa21.35■■□□□ 1.01
CTDP1-205ENST00000590599 TGFBRAP1Q8WUH2 860 aa21.35■■□□□ 1.01
CTDP1-205ENST00000590599 AGXT2Q9BYV1 514 aa21.35■■□□□ 1.01
CTDP1-205ENST00000590599 MCM9Q9NXL9 1143 aa21.35■■□□□ 1.01
CTDP1-205ENST00000590599 ADAMTSL1Q8N6G6 1762 aa21.35■■□□□ 1.01
CTDP1-205ENST00000590599 CYP2D7A0A087X1C5 515 aa21.34■■□□□ 1.01
CTDP1-205ENST00000590599 ANTXR2P58335 489 aa21.34■■□□□ 1.01
CTDP1-205ENST00000590599 SBK1Q52WX2 424 aa21.34■■□□□ 1.01
CTDP1-205ENST00000590599 HHIPL2Q6UWX4 724 aa21.34■■□□□ 1.01
CTDP1-205ENST00000590599 STK11IPQ8N1F8 1099 aa21.34■■□□□ 1.01
CTDP1-205ENST00000590599 FBXL16Q8N461 479 aa21.34■■□□□ 1.01
CTDP1-205ENST00000590599 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.34■■□□□ 1.01
CTDP1-205ENST00000590599 SLC3A2P08195 630 aaKnown RBP21.33■■□□□ 1.01
CTDP1-205ENST00000590599 RRP12Q5JTH9 1297 aaKnown RBP21.33■■□□□ 1.01
CTDP1-205ENST00000590599 CCDC83Q8IWF9 413 aa21.33■■□□□ 1.01
CTDP1-205ENST00000590599 INCENPQ9NQS7 918 aa21.33■■□□□ 1.01
CTDP1-205ENST00000590599 FOCADQ5VW36 1801 aa21.33■■□□□ 1.01
CTDP1-205ENST00000590599 PCP11498 1178 aaKnown RBP21.33■■□□□ 1
CTDP1-205ENST00000590599 RHBDL3P58872 404 aa21.33■■□□□ 1
CTDP1-205ENST00000590599 MKRN1Q9UHC7 482 aaKnown RBP21.33■■□□□ 1
CTDP1-205ENST00000590599 GLTPD2A6NH11 291 aa21.32■■□□□ 1
CTDP1-205ENST00000590599 KDM4AO75164 1064 aa21.32■■□□□ 1
CTDP1-205ENST00000590599 CRKP46108 304 aa21.32■■□□□ 1
CTDP1-205ENST00000590599 HDLBPQ00341 1268 aaKnown RBP21.32■■□□□ 1
CTDP1-205ENST00000590599 APOBRQ0VD83 1088 aa21.32■■□□□ 1
CTDP1-205ENST00000590599 CYB5R4Q7L1T6 521 aa21.32■■□□□ 1
CTDP1-205ENST00000590599 MAPKAPK5Q8IW41 473 aa21.32■■□□□ 1
CTDP1-205ENST00000590599 NECAB1Q8N987 351 aa21.32■■□□□ 1
CTDP1-205ENST00000590599 ZNRF3Q9ULT6 936 aa21.32■■□□□ 1
CTDP1-205ENST00000590599 TACC3Q9Y6A5 838 aa21.32■■□□□ 1
CTDP1-205ENST00000590599 MYO3BQ8WXR4 1341 aa21.32■■□□□ 1
CTDP1-205ENST00000590599 DDX60LQ5H9U9 1706 aaKnown RBP21.32■■□□□ 1
CTDP1-205ENST00000590599 DDNO94850 711 aaPredicted RBP21.31■■□□□ 1
CTDP1-205ENST00000590599 USP17L8P0C7I0 530 aa21.31■■□□□ 1
CTDP1-205ENST00000590599 STK3Q13188 491 aa21.31■■□□□ 1
CTDP1-205ENST00000590599 MRIQ9BWK5 157 aa21.31■■□□□ 1
CTDP1-205ENST00000590599 POTECB2RU33 542 aa21.31■■□□□ 1
CTDP1-205ENST00000590599 CYP2D6P10635 497 aa21.31■■□□□ 1
CTDP1-205ENST00000590599 ESR2Q92731 530 aa21.31■■□□□ 1
CTDP1-205ENST00000590599 TMEM87BQ96K49 555 aa21.31■■□□□ 1
CTDP1-205ENST00000590599 ZDHHC15Q96MV8 337 aa21.31■■□□□ 1
CTDP1-205ENST00000590599 FLT1P17948 1338 aa21.3■■□□□ 1
CTDP1-205ENST00000590599 ZNF541Q9H0D2 1346 aa21.3■■□□□ 1
CTDP1-205ENST00000590599 RAD17O75943 681 aa21.3■■□□□ 1
CTDP1-205ENST00000590599 JDP2Q8WYK2 163 aa21.3■■□□□ 1
CTDP1-205ENST00000590599 ZSWIM5Q9P217 1185 aa21.3■■□□□ 1
CTDP1-205ENST00000590599 SERPINA10Q9UK55 444 aa21.3■■□□□ 1
CTDP1-205ENST00000590599 NAP1L2Q9ULW6 460 aaPredicted RBP21.3■■□□□ 1
CTDP1-205ENST00000590599 ANGEL1Q9UNK9 670 aaKnown RBP21.3■■□□□ 1
CTDP1-205ENST00000590599 SMC3Q9UQE7 1217 aa21.3■■□□□ 1
CTDP1-205ENST00000590599 ECM29Q5VYK3 1845 aa21.3■■□□□ 1
CTDP1-205ENST00000590599 SMIM22K7EJ46 135 aa21.29■■□□□ 1
CTDP1-205ENST00000590599 RBM5P52756 815 aaKnown RBP eCLIP21.29■■□□□ 1
CTDP1-205ENST00000590599 ST3GAL1Q11201 340 aa21.29■■□□□ 1
CTDP1-205ENST00000590599 SART3Q15020 963 aaKnown RBP21.29■■□□□ 1
CTDP1-205ENST00000590599 C12orf60Q5U649 245 aa21.29■■□□□ 1
CTDP1-205ENST00000590599 RSBN1LQ6PCB5 846 aaPredicted RBP21.29■■□□□ 1
CTDP1-205ENST00000590599 NKX2-3Q8TAU0 364 aa21.29■■□□□ 1
CTDP1-205ENST00000590599 GTF3C6Q969F1 213 aa21.29■■□□□ 1
CTDP1-205ENST00000590599 GPHNQ9NQX3 736 aaPredicted RBP21.29■■□□□ 1
CTDP1-205ENST00000590599 USP40Q9NVE5 1235 aa21.29■■□□□ 1
CTDP1-205ENST00000590599 SAP30BPQ9UHR5 308 aaKnown RBP21.29■■□□□ 1
CTDP1-205ENST00000590599 MYH1P12882 1939 aa21.29■■□□□ 1
CTDP1-205ENST00000590599 PSMD14O00487 310 aa21.28■■□□□ 1
CTDP1-205ENST00000590599 SH2B2O14492 632 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms