RNA–Protein interactions for RNA: ENST00000590215.1

MBD1-223, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5

Gene MBD1, Length 749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-223ENST00000590215 MOB2Q70IA6 237 aa22.65■■□□□ 1.22
MBD1-223ENST00000590215 SH3BP5LQ7L8J4 393 aa22.65■■□□□ 1.22
MBD1-223ENST00000590215 EVI5LQ96CN4 794 aa22.65■■□□□ 1.22
MBD1-223ENST00000590215 OSBPL5Q9H0X9 879 aaPredicted RBP22.65■■□□□ 1.22
MBD1-223ENST00000590215 UNCXA6NJT0 531 aa22.64■■□□□ 1.21
MBD1-223ENST00000590215 RNF113AO15541 343 aaKnown RBP22.64■■□□□ 1.21
MBD1-223ENST00000590215 USP2O75604 605 aaPredicted RBP22.64■■□□□ 1.21
MBD1-223ENST00000590215 PICALMQ13492 652 aa22.64■■□□□ 1.21
MBD1-223ENST00000590215 LRRFIP1Q32MZ4 808 aaKnown RBP22.64■■□□□ 1.21
MBD1-223ENST00000590215 ARMC9Q7Z3E5 817 aa22.64■■□□□ 1.21
MBD1-223ENST00000590215 KLRG1Q96E93 195 aa22.64■■□□□ 1.21
MBD1-223ENST00000590215 MAP3K10Q02779 954 aa22.63■■□□□ 1.21
MBD1-223ENST00000590215 TGFBRAP1Q8WUH2 860 aa22.63■■□□□ 1.21
MBD1-223ENST00000590215 CCDC136Q96JN2 1154 aa22.63■■□□□ 1.21
MBD1-223ENST00000590215 ANGEL1Q9UNK9 670 aaKnown RBP22.63■■□□□ 1.21
MBD1-223ENST00000590215 FLT1P17948 1338 aa22.62■■□□□ 1.21
MBD1-223ENST00000590215 DDTLA6NHG4 134 aaPredicted RBP22.62■■□□□ 1.21
MBD1-223ENST00000590215 UBE2Q2LH0YL09 131 aa22.62■■□□□ 1.21
MBD1-223ENST00000590215 TTLL12Q14166 644 aaPredicted RBP22.62■■□□□ 1.21
MBD1-223ENST00000590215 APPBP2Q92624 585 aa22.62■■□□□ 1.21
MBD1-223ENST00000590215 FSD1Q9BTV5 496 aa22.62■■□□□ 1.21
MBD1-223ENST00000590215 MKRN1Q9UHC7 482 aaKnown RBP22.62■■□□□ 1.21
MBD1-223ENST00000590215 FZD1Q9UP38 647 aa22.62■■□□□ 1.21
MBD1-223ENST00000590215 IREB2P48200 963 aaKnown RBP22.61■■□□□ 1.21
MBD1-223ENST00000590215 PRKG1Q13976 671 aa22.61■■□□□ 1.21
MBD1-223ENST00000590215 DCAF15Q66K64 600 aa22.61■■□□□ 1.21
MBD1-223ENST00000590215 RGMBQ6NW40 437 aa22.61■■□□□ 1.21
MBD1-223ENST00000590215 LCORLQ8N3X6 602 aa22.61■■□□□ 1.21
MBD1-223ENST00000590215 CSRNP1Q96S65 589 aa22.61■■□□□ 1.21
MBD1-223ENST00000590215 CDK5RAP2Q96SN8 1893 aa22.61■■□□□ 1.21
MBD1-223ENST00000590215 PUS7LQ9H0K6 701 aaKnown RBP22.61■■□□□ 1.21
MBD1-223ENST00000590215 DHX36Q9H2U1 1008 aaKnown RBP22.61■■□□□ 1.21
MBD1-223ENST00000590215 FOCADQ5VW36 1801 aa22.61■■□□□ 1.21
MBD1-223ENST00000590215 MBD4O95243 580 aa22.6■■□□□ 1.21
MBD1-223ENST00000590215 VEGFBP49765 207 aa22.6■■□□□ 1.21
MBD1-223ENST00000590215 MAPKAPK5Q8IW41 473 aa22.6■■□□□ 1.21
MBD1-223ENST00000590215 OSBP2Q969R2 916 aa22.6■■□□□ 1.21
MBD1-223ENST00000590215 CRNKL1Q9BZJ0 848 aaKnown RBP22.6■■□□□ 1.21
MBD1-223ENST00000590215 TBC1D12O60347 775 aa22.59■■□□□ 1.21
MBD1-223ENST00000590215 ZSCAN29Q8IWY8 852 aaPredicted RBP22.59■■□□□ 1.21
MBD1-223ENST00000590215 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.59■■□□□ 1.21
MBD1-223ENST00000590215 ARMT1Q9H993 441 aa22.59■■□□□ 1.21
MBD1-223ENST00000590215 ZNF112Q9UJU3 913 aa22.59■■□□□ 1.21
MBD1-223ENST00000590215 ECE1P42892 770 aa22.58■■□□□ 1.21
MBD1-223ENST00000590215 ZMYM1Q5SVZ6 1142 aa22.58■■□□□ 1.21
MBD1-223ENST00000590215 CYP4F22Q6NT55 531 aa22.58■■□□□ 1.21
MBD1-223ENST00000590215 CCDC102AQ96A19 550 aa22.58■■□□□ 1.21
MBD1-223ENST00000590215 AIDAQ96BJ3 306 aa22.58■■□□□ 1.21
MBD1-223ENST00000590215 CAPNS2Q96L46 248 aa22.58■■□□□ 1.21
MBD1-223ENST00000590215 ZNF341Q9BYN7 854 aa22.58■■□□□ 1.21
MBD1-223ENST00000590215 PPP4R2Q9NY27 417 aa22.58■■□□□ 1.21
MBD1-223ENST00000590215 WDR33Q9C0J8 1336 aaKnown RBP22.57■■□□□ 1.2
MBD1-223ENST00000590215 AK9Q5TCS8 1911 aa22.57■■□□□ 1.2
MBD1-223ENST00000590215 FAM155AB1AL88 458 aaPredicted RBP22.57■■□□□ 1.2
MBD1-223ENST00000590215 USP5P45974 858 aa22.57■■□□□ 1.2
MBD1-223ENST00000590215 TTC22Q5TAA0 569 aa22.57■■□□□ 1.2
MBD1-223ENST00000590215 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.57■■□□□ 1.2
MBD1-223ENST00000590215 MIGA2Q7L4E1 593 aa22.57■■□□□ 1.2
MBD1-223ENST00000590215 METTL16Q86W50 562 aaKnown RBP22.57■■□□□ 1.2
MBD1-223ENST00000590215 ANKRD13AQ8IZ07 590 aa22.57■■□□□ 1.2
MBD1-223ENST00000590215 JMYQ8N9B5 988 aa22.57■■□□□ 1.2
MBD1-223ENST00000590215 STRBPQ96SI9 672 aaKnown RBP22.57■■□□□ 1.2
MBD1-223ENST00000590215 PI4KBQ9UBF8 816 aa22.57■■□□□ 1.2
MBD1-223ENST00000590215 TRIM6-TRIM34B2RNG4 842 aa22.56■■□□□ 1.2
MBD1-223ENST00000590215 SLC10A3P09131 477 aa22.56■■□□□ 1.2
MBD1-223ENST00000590215 ZNF157P51786 506 aaPredicted RBP22.56■■□□□ 1.2
MBD1-223ENST00000590215 MAP3K9P80192 1104 aa22.56■■□□□ 1.2
MBD1-223ENST00000590215 DCP1AQ9NPI6 582 aaPredicted RBP22.56■■□□□ 1.2
MBD1-223ENST00000590215 ATP8A2Q9NTI2 1148 aa22.56■■□□□ 1.2
MBD1-223ENST00000590215 PHF20L1A8MW92 1017 aa22.55■■□□□ 1.2
MBD1-223ENST00000590215 GSPT1P15170 499 aaKnown RBP22.55■■□□□ 1.2
MBD1-223ENST00000590215 RASAL3Q86YV0 1011 aa22.55■■□□□ 1.2
MBD1-223ENST00000590215 SDR42E1Q8WUS8 393 aa22.55■■□□□ 1.2
MBD1-223ENST00000590215 RILPL2Q969X0 211 aa22.55■■□□□ 1.2
MBD1-223ENST00000590215 PALD1Q9ULE6 856 aa22.55■■□□□ 1.2
MBD1-223ENST00000590215 M0R2C6 588 aa22.54■■□□□ 1.2
MBD1-223ENST00000590215 GPAA1O43292 621 aa22.54■■□□□ 1.2
MBD1-223ENST00000590215 PRKAB2O43741 272 aa22.54■■□□□ 1.2
MBD1-223ENST00000590215 PAXIP1Q6ZW49 1069 aaPredicted RBP22.54■■□□□ 1.2
MBD1-223ENST00000590215 FOXP4Q8IVH2 680 aaPredicted RBP22.54■■□□□ 1.2
MBD1-223ENST00000590215 CLMNQ96JQ2 1002 aa22.54■■□□□ 1.2
MBD1-223ENST00000590215 WRNIP1Q96S55 665 aa22.54■■□□□ 1.2
MBD1-223ENST00000590215 HERC5Q9UII4 1024 aaKnown RBP22.54■■□□□ 1.2
MBD1-223ENST00000590215 MAP2K2P36507 400 aa22.53■■□□□ 1.2
MBD1-223ENST00000590215 NOGQ13253 232 aa22.53■■□□□ 1.2
MBD1-223ENST00000590215 SLC10A4Q96EP9 437 aa22.53■■□□□ 1.2
MBD1-223ENST00000590215 SEC62Q99442 399 aaKnown RBP22.53■■□□□ 1.2
MBD1-223ENST00000590215 HELLSQ9NRZ9 838 aa22.53■■□□□ 1.2
MBD1-223ENST00000590215 SAP30BPQ9UHR5 308 aaKnown RBP22.53■■□□□ 1.2
MBD1-223ENST00000590215 DDX60LQ5H9U9 1706 aaKnown RBP22.53■■□□□ 1.2
MBD1-223ENST00000590215 OTOFQ9HC10 1997 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 HLA-DOAP06340 250 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 SLURP2P0DP57 97 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 GNAT2P19087 354 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 SDSP20132 328 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 VGLL4Q14135 290 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 NOL9Q5SY16 702 aaKnown RBP22.52■■□□□ 1.2
MBD1-223ENST00000590215 GIMAP6Q6P9H5 292 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 EHD4Q9H223 541 aa22.52■■□□□ 1.2
MBD1-223ENST00000590215 SLC4A4Q9Y6R1 1079 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms