RNA–Protein interactions for RNA: ENST00000589828.1

VAT1-207, Transcript of vesicle amine transport 1, humanhuman

TSL 2

Gene VAT1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-207ENST00000589828 TNPO2O14787 897 aaKnown RBP10.08□□□□□ -0.8
VAT1-207ENST00000589828 LRRC24Q50LG9 513 aa10.08□□□□□ -0.8
VAT1-207ENST00000589828 CDC42EP5Q6NZY7 148 aa10.08□□□□□ -0.8
VAT1-207ENST00000589828 HHIPL2Q6UWX4 724 aa10.08□□□□□ -0.8
VAT1-207ENST00000589828 PRRT2Q7Z6L0 340 aaPredicted RBP10.08□□□□□ -0.8
VAT1-207ENST00000589828 SUCLG2Q96I99 432 aa10.08□□□□□ -0.8
VAT1-207ENST00000589828 GUCD1Q96NT3 240 aa10.08□□□□□ -0.8
VAT1-207ENST00000589828 FAM198AQ9UFP1 575 aa10.08□□□□□ -0.8
VAT1-207ENST00000589828 TAOK2Q9UL54 1235 aa10.08□□□□□ -0.8
VAT1-207ENST00000589828 ZHX2Q9Y6X8 837 aa10.08□□□□□ -0.8
VAT1-207ENST00000589828 ATRNL1Q5VV63 1379 aa10.07□□□□□ -0.8
VAT1-207ENST00000589828 VAMP4O75379 141 aa10.07□□□□□ -0.8
VAT1-207ENST00000589828 CAPN2P17655 700 aa10.07□□□□□ -0.8
VAT1-207ENST00000589828 PTPRAP18433 802 aa10.07□□□□□ -0.8
VAT1-207ENST00000589828 DDX10Q13206 875 aaKnown RBP10.07□□□□□ -0.8
VAT1-207ENST00000589828 GADL1Q6ZQY3 521 aa10.07□□□□□ -0.8
VAT1-207ENST00000589828 CCDC84Q86UT8 332 aaPredicted RBP10.07□□□□□ -0.8
VAT1-207ENST00000589828 VPS37DQ86XT2 251 aa10.07□□□□□ -0.8
VAT1-207ENST00000589828 VGLL2Q8N8G2 317 aa10.07□□□□□ -0.8
VAT1-207ENST00000589828 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.07□□□□□ -0.8
VAT1-207ENST00000589828 DAGLAQ9Y4D2 1042 aa10.07□□□□□ -0.8
VAT1-207ENST00000589828 AFG3L2Q9Y4W6 797 aa10.07□□□□□ -0.8
VAT1-207ENST00000589828 A0A1B0GUL6 1792 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 POTEB2H3BUK9 544 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 FRAT2O75474 233 aaPredicted RBP10.06□□□□□ -0.8
VAT1-207ENST00000589828 DIXDC1Q155Q3 683 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 SH3BP5LQ7L8J4 393 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 FASTKD5Q7L8L6 764 aaKnown RBP10.06□□□□□ -0.8
VAT1-207ENST00000589828 IFNLR1Q8IU57 520 aaPredicted RBP10.06□□□□□ -0.8
VAT1-207ENST00000589828 WWC1Q8IX03 1113 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 ANKRD13CQ8N6S4 541 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 ANKLE1Q8NAG6 615 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 UBE2OQ9C0C9 1292 aaKnown RBP10.06□□□□□ -0.8
VAT1-207ENST00000589828 NBPF3Q9H094 633 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 C11orf49Q9H6J7 331 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 GJD2Q9UKL4 321 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 SUGT1Q9Y2Z0 365 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 PFASO15067 1338 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 MROH5Q6ZUA9 1318 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 RPTORQ8N122 1335 aa10.06□□□□□ -0.8
VAT1-207ENST00000589828 CAVIN4Q5BKX8 364 aa10.05□□□□□ -0.8
VAT1-207ENST00000589828 METTL24Q5JXM2 366 aa10.05□□□□□ -0.8
VAT1-207ENST00000589828 SCYL3Q8IZE3 742 aa10.05□□□□□ -0.8
VAT1-207ENST00000589828 FAM161BQ96MY7 647 aa10.05□□□□□ -0.8
VAT1-207ENST00000589828 OGDHLQ9ULD0 1010 aa10.05□□□□□ -0.8
VAT1-207ENST00000589828 SLC45A1Q9Y2W3 748 aa10.05□□□□□ -0.8
VAT1-207ENST00000589828 MAST3O60307 1309 aa10.05□□□□□ -0.8
VAT1-207ENST00000589828 PDE8BO95263 885 aa10.04□□□□□ -0.8
VAT1-207ENST00000589828 HMGCRP04035 888 aa10.04□□□□□ -0.8
VAT1-207ENST00000589828 FGFR2P21802 821 aa10.04□□□□□ -0.8
VAT1-207ENST00000589828 PRDX5P30044 214 aa10.04□□□□□ -0.8
VAT1-207ENST00000589828 FXR2P51116 673 aaKnown RBP eCLIP10.04□□□□□ -0.82e-10■■■■□ 21.6
VAT1-207ENST00000589828 TREML2Q5T2D2 321 aa10.04□□□□□ -0.8
VAT1-207ENST00000589828 ANKRD44Q8N8A2 993 aa10.04□□□□□ -0.8
VAT1-207ENST00000589828 KLHDC4Q8TBB5 520 aa10.04□□□□□ -0.8
VAT1-207ENST00000589828 SMCR8Q8TEV9 937 aaPredicted RBP10.04□□□□□ -0.8
VAT1-207ENST00000589828 COA7Q96BR5 231 aa10.04□□□□□ -0.8
VAT1-207ENST00000589828 USP40Q9NVE5 1235 aa10.04□□□□□ -0.8
VAT1-207ENST00000589828 C9orf78Q9NZ63 289 aaPredicted RBP10.04□□□□□ -0.8
VAT1-207ENST00000589828 FANCIQ9NVI1 1328 aa10.04□□□□□ -0.8
VAT1-207ENST00000589828 ALPK3Q96L96 1907 aa10.03□□□□□ -0.8
VAT1-207ENST00000589828 TRIM75PA6NK02 468 aa10.03□□□□□ -0.8
VAT1-207ENST00000589828 NBPF7P0C2Y1 421 aaPredicted RBP10.03□□□□□ -0.8
VAT1-207ENST00000589828 MDM2Q00987 491 aaPredicted RBP10.03□□□□□ -0.8
VAT1-207ENST00000589828 MAP3K10Q02779 954 aa10.03□□□□□ -0.8
VAT1-207ENST00000589828 FAM110CQ1W6H9 321 aa10.03□□□□□ -0.8
VAT1-207ENST00000589828 LRRC26Q2I0M4 334 aa10.03□□□□□ -0.8
VAT1-207ENST00000589828 CCDC27Q2M243 656 aa10.03□□□□□ -0.8
VAT1-207ENST00000589828 FAM109BQ6ICB4 259 aaPredicted RBP10.03□□□□□ -0.8
VAT1-207ENST00000589828 BICC1Q9H694 974 aaKnown RBP10.03□□□□□ -0.8
VAT1-207ENST00000589828 PRKRIP1Q9H875 184 aaPredicted RBP10.03□□□□□ -0.8
VAT1-207ENST00000589828 HMX1Q9NP08 348 aaPredicted RBP10.03□□□□□ -0.8
VAT1-207ENST00000589828 PRDM6Q9NQX0 595 aa10.03□□□□□ -0.8
VAT1-207ENST00000589828 PICK1Q9NRD5 415 aa10.03□□□□□ -0.8
VAT1-207ENST00000589828 AGTPBP1Q9UPW5 1226 aa10.03□□□□□ -0.8
VAT1-207ENST00000589828 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.81
VAT1-207ENST00000589828 ALDH1L1O75891 902 aa10.02□□□□□ -0.81
VAT1-207ENST00000589828 COL6A1P12109 1028 aa10.02□□□□□ -0.81
VAT1-207ENST00000589828 RGS3P49796 1198 aa10.02□□□□□ -0.81
VAT1-207ENST00000589828 EXOSC9Q06265 439 aaKnown RBP10.02□□□□□ -0.81
VAT1-207ENST00000589828 RABL6Q3YEC7 729 aaPredicted RBP10.02□□□□□ -0.81
VAT1-207ENST00000589828 MAP3K21Q5TCX8 1036 aa10.02□□□□□ -0.81
VAT1-207ENST00000589828 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
VAT1-207ENST00000589828 WDR66Q8TBY9 1149 aa10.02□□□□□ -0.81
VAT1-207ENST00000589828 TRIB2Q92519 343 aa10.02□□□□□ -0.81
VAT1-207ENST00000589828 DDX4Q9NQI0 724 aaKnown RBP10.02□□□□□ -0.81
VAT1-207ENST00000589828 IL16Q14005 1332 aa10.02□□□□□ -0.81
VAT1-207ENST00000589828 PEX10O60683 326 aa10.01□□□□□ -0.81
VAT1-207ENST00000589828 CCDC184Q52MB2 194 aa10.01□□□□□ -0.81
VAT1-207ENST00000589828 SLC4A10Q6U841 1118 aa10.01□□□□□ -0.81
VAT1-207ENST00000589828 IDI2Q9BXS1 227 aa10.01□□□□□ -0.81
VAT1-207ENST00000589828 SRCIN1Q9C0H9 1055 aa10.01□□□□□ -0.81
VAT1-207ENST00000589828 UTYO14607 1347 aa10.01□□□□□ -0.81
VAT1-207ENST00000589828 KIF16BQ96L93 1317 aa10.01□□□□□ -0.81
VAT1-207ENST00000589828 RFX7Q2KHR2 1363 aa10.01□□□□□ -0.81
VAT1-207ENST00000589828 COL2A1P02458 1487 aaPredicted RBP10□□□□□ -0.81
VAT1-207ENST00000589828 CTNND1O60716 968 aaKnown RBP10□□□□□ -0.81
VAT1-207ENST00000589828 IFIT1P09914 478 aaKnown RBP10□□□□□ -0.81
VAT1-207ENST00000589828 PRKAR2AP13861 404 aaKnown RBP10□□□□□ -0.81
VAT1-207ENST00000589828 CYP2B6P20813 491 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms