RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 CHADLQ6NUI6 762 aa14.56□□□□□ -0.08
DNMT1-218ENST00000589294 KRT26Q7Z3Y9 468 aa14.56□□□□□ -0.08
DNMT1-218ENST00000589294 ZNF589Q86UQ0 364 aaPredicted RBP14.56□□□□□ -0.08
DNMT1-218ENST00000589294 MAPKAPK5Q8IW41 473 aa14.56□□□□□ -0.08
DNMT1-218ENST00000589294 IFNL3Q8IZI9 196 aa14.56□□□□□ -0.08
DNMT1-218ENST00000589294 DSCC1Q9BVC3 393 aa14.56□□□□□ -0.08
DNMT1-218ENST00000589294 DHX36Q9H2U1 1008 aaKnown RBP14.56□□□□□ -0.08
DNMT1-218ENST00000589294 DCP1AQ9NPI6 582 aaPredicted RBP14.56□□□□□ -0.08
DNMT1-218ENST00000589294 DDX4Q9NQI0 724 aaKnown RBP14.56□□□□□ -0.08
DNMT1-218ENST00000589294 POTEIP0CG38 1075 aa14.55□□□□□ -0.08
DNMT1-218ENST00000589294 POTEJP0CG39 1038 aa14.55□□□□□ -0.08
DNMT1-218ENST00000589294 TCP10Q12799 353 aa14.55□□□□□ -0.08
DNMT1-218ENST00000589294 PICALMQ13492 652 aa14.55□□□□□ -0.08
DNMT1-218ENST00000589294 USP48Q86UV5 1035 aa14.55□□□□□ -0.08
DNMT1-218ENST00000589294 SDR42E1Q8WUS8 393 aa14.55□□□□□ -0.08
DNMT1-218ENST00000589294 OSBPL5Q9H0X9 879 aaPredicted RBP14.55□□□□□ -0.08
DNMT1-218ENST00000589294 TAOK2Q9UL54 1235 aa14.55□□□□□ -0.08
DNMT1-218ENST00000589294 FLT1P17948 1338 aa14.55□□□□□ -0.08
DNMT1-218ENST00000589294 CNTNAP1P78357 1384 aa14.55□□□□□ -0.08
DNMT1-218ENST00000589294 TOMM70O94826 608 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 REC8O95072 547 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 SUPT20HL1Q3ZLR7 823 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 SBK1Q52WX2 424 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 VPS53Q5VIR6 699 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 TTC6Q86TZ1 520 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 ZFPM1Q8IX07 1006 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 HOOK2Q96ED9 719 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 IL25Q9H293 177 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 MCM9Q9NXL9 1143 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 CTNNA3Q9UI47 895 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 ADAMTSL1Q8N6G6 1762 aa14.54□□□□□ -0.08
DNMT1-218ENST00000589294 COL2A1P02458 1487 aaPredicted RBP14.53□□□□□ -0.08
DNMT1-218ENST00000589294 ZMYM6O95789 1325 aa14.53□□□□□ -0.08
DNMT1-218ENST00000589294 FOXP2O15409 715 aa14.53□□□□□ -0.08
DNMT1-218ENST00000589294 EPB41L2O43491 1005 aaKnown RBP14.53□□□□□ -0.08
DNMT1-218ENST00000589294 FGAP02671 866 aa14.53□□□□□ -0.08
DNMT1-218ENST00000589294 MAP1SQ66K74 1059 aaPredicted RBP14.53□□□□□ -0.08
DNMT1-218ENST00000589294 FOXP4Q8IVH2 680 aaPredicted RBP14.53□□□□□ -0.08
DNMT1-218ENST00000589294 ZSCAN29Q8IWY8 852 aaPredicted RBP14.53□□□□□ -0.08
DNMT1-218ENST00000589294 AMOTL1Q8IY63 956 aa14.53□□□□□ -0.08
DNMT1-218ENST00000589294 RBM46Q8TBY0 533 aaKnown RBP14.53□□□□□ -0.08
DNMT1-218ENST00000589294 MAP4K1Q92918 833 aa14.53□□□□□ -0.08
DNMT1-218ENST00000589294 TEPSINQ96N21 525 aa14.53□□□□□ -0.08
DNMT1-218ENST00000589294 TMEM39BQ9GZU3 492 aa14.53□□□□□ -0.08
DNMT1-218ENST00000589294 NAPBQ9H115 298 aa14.53□□□□□ -0.08
DNMT1-218ENST00000589294 PI4KBQ9UBF8 816 aa14.53□□□□□ -0.08
DNMT1-218ENST00000589294 ATRNL1Q5VV63 1379 aa14.52□□□□□ -0.08
DNMT1-218ENST00000589294 USP17L12C9JPN9 530 aa14.52□□□□□ -0.09
DNMT1-218ENST00000589294 USP17L21D6R901 530 aa14.52□□□□□ -0.09
DNMT1-218ENST00000589294 ITGBL1O95965 494 aaPredicted RBP14.52□□□□□ -0.09
DNMT1-218ENST00000589294 POLR3DP05423 398 aaPredicted RBP14.52□□□□□ -0.09
DNMT1-218ENST00000589294 TDO2P48775 406 aa14.52□□□□□ -0.09
DNMT1-218ENST00000589294 CTR9Q6PD62 1173 aa14.52□□□□□ -0.09
DNMT1-218ENST00000589294 SH3BP5LQ7L8J4 393 aa14.52□□□□□ -0.09
DNMT1-218ENST00000589294 SMC1BQ8NDV3 1235 aa14.52□□□□□ -0.09
DNMT1-218ENST00000589294 LSG1Q9H089 658 aaKnown RBP14.52□□□□□ -0.09
DNMT1-218ENST00000589294 EPB41L4AQ9HCS5 686 aaPredicted RBP14.52□□□□□ -0.09
DNMT1-218ENST00000589294 ANO2Q9NQ90 1003 aa14.52□□□□□ -0.09
DNMT1-218ENST00000589294 ARPP21Q9UBL0 812 aaPredicted RBP14.52□□□□□ -0.09
DNMT1-218ENST00000589294 PALD1Q9ULE6 856 aa14.52□□□□□ -0.09
DNMT1-218ENST00000589294 U3KPZ7 1027 aaPredicted RBP14.52□□□□□ -0.09
DNMT1-218ENST00000589294 ECM29Q5VYK3 1845 aa14.52□□□□□ -0.09
DNMT1-218ENST00000589294 DDTLA6NHG4 134 aaPredicted RBP14.51□□□□□ -0.09
DNMT1-218ENST00000589294 ADM5C9JUS6 153 aa14.51□□□□□ -0.09
DNMT1-218ENST00000589294 TBC1D12O60347 775 aa14.51□□□□□ -0.09
DNMT1-218ENST00000589294 HLA-DOAP06340 250 aa14.51□□□□□ -0.09
DNMT1-218ENST00000589294 MAP3K10Q02779 954 aa14.51□□□□□ -0.09
DNMT1-218ENST00000589294 PTH1RQ03431 593 aa14.51□□□□□ -0.09
DNMT1-218ENST00000589294 FSTL1Q12841 308 aa14.51□□□□□ -0.09
DNMT1-218ENST00000589294 C8orf34Q49A92 452 aa14.51□□□□□ -0.09
DNMT1-218ENST00000589294 C12orf60Q5U649 245 aa14.51□□□□□ -0.09
DNMT1-218ENST00000589294 METTL16Q86W50 562 aaKnown RBP14.51□□□□□ -0.09
DNMT1-218ENST00000589294 CSRNP1Q96S65 589 aa14.51□□□□□ -0.09
DNMT1-218ENST00000589294 GLIS2Q9BZE0 524 aaPredicted RBP14.51□□□□□ -0.09
DNMT1-218ENST00000589294 SAP30BPQ9UHR5 308 aaKnown RBP14.51□□□□□ -0.09
DNMT1-218ENST00000589294 SCAF8Q9UPN6 1271 aaKnown RBP14.51□□□□□ -0.09
DNMT1-218ENST00000589294 NF2P35240 595 aa14.5□□□□□ -0.09
DNMT1-218ENST00000589294 PLCD1P51178 756 aa14.5□□□□□ -0.09
DNMT1-218ENST00000589294 NBPF12Q5TAG4 269 aaPredicted RBP14.5□□□□□ -0.09
DNMT1-218ENST00000589294 CDCA5Q96FF9 252 aa14.5□□□□□ -0.09
DNMT1-218ENST00000589294 EHD4Q9H223 541 aa14.5□□□□□ -0.09
DNMT1-218ENST00000589294 HERC5Q9UII4 1024 aaKnown RBP14.5□□□□□ -0.09
DNMT1-218ENST00000589294 ANAPC4Q9UJX5 808 aa14.5□□□□□ -0.09
DNMT1-218ENST00000589294 POLR2AP24928 1970 aaKnown RBP14.5□□□□□ -0.09
DNMT1-218ENST00000589294 MINDY4BA8MYZ0 360 aa14.49□□□□□ -0.09
DNMT1-218ENST00000589294 ZNF213O14771 459 aa14.49□□□□□ -0.09
DNMT1-218ENST00000589294 SLC3A2P08195 630 aaKnown RBP14.49□□□□□ -0.09
DNMT1-218ENST00000589294 PRAMEF18Q5VWM3 479 aa14.49□□□□□ -0.09
DNMT1-218ENST00000589294 DCAF15Q66K64 600 aa14.49□□□□□ -0.09
DNMT1-218ENST00000589294 SERPINB13Q9UIV8 391 aa14.49□□□□□ -0.09
DNMT1-218ENST00000589294 IMMTQ16891 758 aaKnown RBP14.48□□□□□ -0.09
DNMT1-218ENST00000589294 USP26Q9BXU7 913 aa14.48□□□□□ -0.09
DNMT1-218ENST00000589294 ZNF287Q9HBT7 754 aa14.48□□□□□ -0.09
DNMT1-218ENST00000589294 SWAP70Q9UH65 585 aa14.48□□□□□ -0.09
DNMT1-218ENST00000589294 RBM8AQ9Y5S9 174 aaKnown RBP14.48□□□□□ -0.09
DNMT1-218ENST00000589294 FOCADQ5VW36 1801 aa14.48□□□□□ -0.09
DNMT1-218ENST00000589294 TRAF5O00463 557 aa14.47□□□□□ -0.09
DNMT1-218ENST00000589294 PPP1R12BO60237 982 aaPredicted RBP14.47□□□□□ -0.09
DNMT1-218ENST00000589294 CYP2D6P10635 497 aa14.47□□□□□ -0.09
DNMT1-218ENST00000589294 PCP11498 1178 aaKnown RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms