RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 TONSLQ96HA7 1378 aa10.6□□□□□ -0.71
ATG4D-210ENST00000588972 NINLQ9Y2I6 1382 aa10.6□□□□□ -0.71
ATG4D-210ENST00000588972 LMO7Q8WWI1 1683 aa10.6□□□□□ -0.71
ATG4D-210ENST00000588972 RGPD3A6NKT7 1758 aaPredicted RBP10.6□□□□□ -0.71
ATG4D-210ENST00000588972 RGPD4Q7Z3J3 1758 aa10.6□□□□□ -0.71
ATG4D-210ENST00000588972 A0A1W2PP55 124 aa10.59□□□□□ -0.71
ATG4D-210ENST00000588972 FIGNL2A6NMB9 653 aa10.59□□□□□ -0.71
ATG4D-210ENST00000588972 ATF4P18848 351 aaPredicted RBP10.59□□□□□ -0.71
ATG4D-210ENST00000588972 CHRNA2Q15822 529 aa10.59□□□□□ -0.71
ATG4D-210ENST00000588972 GPRASP2Q96D09 838 aa10.59□□□□□ -0.71
ATG4D-210ENST00000588972 STRN4Q9NRL3 753 aa10.59□□□□□ -0.71
ATG4D-210ENST00000588972 LATS2Q9NRM7 1088 aa10.59□□□□□ -0.71
ATG4D-210ENST00000588972 KBTBD4Q9NVX7 518 aa10.59□□□□□ -0.71
ATG4D-210ENST00000588972 PLA2G2EQ9NZK7 142 aa10.59□□□□□ -0.71
ATG4D-210ENST00000588972 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.59□□□□□ -0.71
ATG4D-210ENST00000588972 PARP4Q9UKK3 1724 aaKnown RBP10.58□□□□□ -0.72
ATG4D-210ENST00000588972 NBPF8Q3BBV2 869 aa10.58□□□□□ -0.72
ATG4D-210ENST00000588972 PEAR1Q5VY43 1037 aaPredicted RBP10.58□□□□□ -0.72
ATG4D-210ENST00000588972 EHD4Q9H223 541 aa10.58□□□□□ -0.72
ATG4D-210ENST00000588972 KANSL3Q9P2N6 904 aa10.58□□□□□ -0.72
ATG4D-210ENST00000588972 SASH3O75995 380 aa10.57□□□□□ -0.72
ATG4D-210ENST00000588972 F11P03951 625 aa10.57□□□□□ -0.72
ATG4D-210ENST00000588972 EDN3P14138 238 aa10.57□□□□□ -0.72
ATG4D-210ENST00000588972 KCNQ4P56696 695 aa10.57□□□□□ -0.72
ATG4D-210ENST00000588972 PGBD3Q8N328 593 aa10.57□□□□□ -0.72
ATG4D-210ENST00000588972 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.57□□□□□ -0.72
ATG4D-210ENST00000588972 RSRP1Q9BUV0 290 aa10.57□□□□□ -0.72
ATG4D-210ENST00000588972 SPON1Q9HCB6 807 aa10.57□□□□□ -0.72
ATG4D-210ENST00000588972 DYRK1BQ9Y463 629 aa10.57□□□□□ -0.72
ATG4D-210ENST00000588972 CAMTA1Q9Y6Y1 1673 aa10.57□□□□□ -0.72
ATG4D-210ENST00000588972 POLR3AO14802 1390 aaPredicted RBP10.56□□□□□ -0.72
ATG4D-210ENST00000588972 CPDO75976 1380 aa10.56□□□□□ -0.72
ATG4D-210ENST00000588972 MMRN1Q13201 1228 aa10.56□□□□□ -0.72
ATG4D-210ENST00000588972 PRPF40BQ6NWY9 871 aaKnown RBP10.56□□□□□ -0.72
ATG4D-210ENST00000588972 RASGRP4Q8TDF6 673 aa10.56□□□□□ -0.72
ATG4D-210ENST00000588972 PPP4R2Q9NY27 417 aa10.56□□□□□ -0.72
ATG4D-210ENST00000588972 KCNH4Q9UQ05 1017 aa10.56□□□□□ -0.72
ATG4D-210ENST00000588972 PEAK1Q9H792 1746 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 STK10O94804 968 aaKnown RBP10.55□□□□□ -0.72
ATG4D-210ENST00000588972 EVA1CP58658 441 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 MAP3K10Q02779 954 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 SCARF1Q14162 830 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 SOGA3Q5TF21 947 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 TCP11L2Q8N4U5 519 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 OR13H1Q8NG92 308 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 OVOS2A0A0G2JMS6 1433 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 OVOS2A0A0J9YW53 1432 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 OVOS2Q6IE36 1432 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 COL5A2P05997 1499 aaPredicted RBP10.55□□□□□ -0.72
ATG4D-210ENST00000588972 LRRC37A3O60309 1634 aa10.55□□□□□ -0.72
ATG4D-210ENST00000588972 CASZ1Q86V15 1759 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 QRICH2Q9H0J4 1663 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 C11orf95C9JLR9 678 aaPredicted RBP10.54□□□□□ -0.72
ATG4D-210ENST00000588972 KCNQ2O43526 872 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 BMP1P13497 986 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 FCGRTP55899 365 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 CTC1Q2NKJ3 1217 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 KRT25Q7Z3Z0 450 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 TRIM56Q9BRZ2 755 aaKnown RBP10.54□□□□□ -0.72
ATG4D-210ENST00000588972 SPON2Q9BUD6 331 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 GSX2Q9BZM3 304 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 PIF1Q9H611 641 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 ABCB6Q9NP58 842 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 ADAMTS1Q9UHI8 967 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 SALL4Q9UJQ4 1053 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 THRAP3Q9Y2W1 955 aaKnown RBP10.54□□□□□ -0.72
ATG4D-210ENST00000588972 USP19O94966 1318 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 CLSPNQ9HAW4 1339 aa10.54□□□□□ -0.72
ATG4D-210ENST00000588972 ROCK2O75116 1388 aaKnown RBP10.53□□□□□ -0.72
ATG4D-210ENST00000588972 MMP20O60882 483 aa10.53□□□□□ -0.72
ATG4D-210ENST00000588972 TARSP26639 723 aaKnown RBP10.53□□□□□ -0.72
ATG4D-210ENST00000588972 SFSWAPQ12872 951 aaKnown RBP10.53□□□□□ -0.72
ATG4D-210ENST00000588972 CCINQ13939 588 aa10.53□□□□□ -0.72
ATG4D-210ENST00000588972 CCDC85BQ15834 202 aaPredicted RBP10.53□□□□□ -0.72
ATG4D-210ENST00000588972 NUTM2GQ5VZR2 741 aa10.53□□□□□ -0.72
ATG4D-210ENST00000588972 KIAA0825Q8IV33 1275 aa10.53□□□□□ -0.72
ATG4D-210ENST00000588972 ANKRD24Q8TF21 1146 aa10.53□□□□□ -0.72
ATG4D-210ENST00000588972 GAS2L1Q99501 681 aaPredicted RBP10.53□□□□□ -0.72
ATG4D-210ENST00000588972 OXCT2Q9BYC2 517 aaPredicted RBP10.53□□□□□ -0.72
ATG4D-210ENST00000588972 PPM1HQ9ULR3 514 aa10.53□□□□□ -0.72
ATG4D-210ENST00000588972 CRB1P82279 1406 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 SBF2Q86WG5 1849 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 PHF20L1A8MW92 1017 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 EFSO43281 561 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 FAM157BP0CG42 384 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 PWP1Q13610 501 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 EFHC2Q5JST6 749 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 TRIM46Q7Z4K8 759 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 RELL1Q8IUW5 271 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 ZSWIM4Q9H7M6 989 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 ACEP12821 1306 aa10.52□□□□□ -0.73
ATG4D-210ENST00000588972 WNK3Q9BYP7 1800 aa10.51□□□□□ -0.73
ATG4D-210ENST00000588972 MYOM1P52179 1685 aa10.51□□□□□ -0.73
ATG4D-210ENST00000588972 TMEM238LA0A1B0GVL6 79 aa10.51□□□□□ -0.73
ATG4D-210ENST00000588972 F6X3S4 739 aa10.51□□□□□ -0.73
ATG4D-210ENST00000588972 XRCC5P13010 732 aaKnown RBP10.51□□□□□ -0.73
ATG4D-210ENST00000588972 SEC16BQ96JE7 1060 aa10.51□□□□□ -0.73
ATG4D-210ENST00000588972 TCF12Q99081 682 aa10.51□□□□□ -0.73
ATG4D-210ENST00000588972 LIN7BQ9HAP6 207 aa10.51□□□□□ -0.73
ATG4D-210ENST00000588972 ZFATQ9P243 1243 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms