RNA–Protein interactions for RNA: ENST00000588770.5

LAMA3-210, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 4,921 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-210ENST00000588770 TOP1P11387 765 aaKnown RBP8.73□□□□□ -1.01
LAMA3-210ENST00000588770 LMNB1P20700 586 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 ZC3H6P61129 1189 aaKnown RBP8.73□□□□□ -1.01
LAMA3-210ENST00000588770 FAM160A1Q05DH4 1040 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 CBX3Q13185 183 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 STK3Q13188 491 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 SRGAP1Q7Z6B7 1085 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 IWS1Q96ST2 819 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 NAP1L3Q99457 506 aaPredicted RBP8.73□□□□□ -1.01
LAMA3-210ENST00000588770 CFAP45Q9UL16 551 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 GOLGA8KD6RF30 607 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 FLOT1O75955 427 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 TUBB2AQ13885 445 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 TEX9Q8N6V9 391 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 TAF4BQ92750 862 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 HAUS1Q96CS2 278 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 IL17RAQ96F46 866 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 TUBB2BQ9BVA1 445 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 HAUS2Q9NVX0 235 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 ZNF711Q9Y462 761 aa8.73□□□□□ -1.01
LAMA3-210ENST00000588770 AP5Z1O43299 807 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 MATR3P43243 847 aaKnown RBP eCLIP8.72□□□□□ -1.01
LAMA3-210ENST00000588770 IQCEQ6IPM2 695 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 PEX5LQ8IYB4 626 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 ZNF280CQ8ND82 737 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 USP26Q9BXU7 913 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 SCAND2PQ9GZW5 306 aaPredicted RBP8.72□□□□□ -1.01
LAMA3-210ENST00000588770 DRC3Q9H069 523 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 PCDHGC5Q9Y5F6 944 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 STK24Q9Y6E0 443 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 E7EVH7 732 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 F13A1P00488 732 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 MLH1P40692 756 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 ZFYVE27Q5T4F4 411 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 ANKS4BQ8N8V4 417 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 CCDC63Q8NA47 563 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 GPATCH3Q96I76 525 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 MPP4Q96JB8 637 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 PCMTD1Q96MG8 357 aaPredicted RBP8.72□□□□□ -1.01
LAMA3-210ENST00000588770 WDR70Q9NW82 654 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 DIAPH2O60879 1101 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 ATP4AP20648 1035 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 GUCY1B3Q02153 619 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 DNM1Q05193 864 aaKnown RBP8.72□□□□□ -1.01
LAMA3-210ENST00000588770 GALNT17Q6IS24 598 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 MAGEA10P43363 369 aaPredicted RBP8.72□□□□□ -1.01
LAMA3-210ENST00000588770 CLCN2P51788 898 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 CDCA2Q69YH5 1023 aaPredicted RBP8.72□□□□□ -1.01
LAMA3-210ENST00000588770 UBXN6Q9BZV1 441 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 TSC22D4Q9Y3Q8 395 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 KAT6BQ8WYB5 2073 aa8.72□□□□□ -1.01
LAMA3-210ENST00000588770 F8VZ95 297 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 MBD4O95243 580 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 BLVRAP53004 296 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 LONRF3Q496Y0 759 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 BICDL1Q6ZP65 573 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 HNRNPLLQ8WVV9 542 aaKnown RBP8.71□□□□□ -1.01
LAMA3-210ENST00000588770 CLIC6Q96NY7 704 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 SCOCQ9UIL1 159 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 CTAGE9A4FU28 777 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 VIMP08670 466 aaKnown RBP8.71□□□□□ -1.01
LAMA3-210ENST00000588770 CPLX4Q7Z7G2 160 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 SLF2Q8IX21 1173 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 GALNT15Q8N3T1 639 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 ARFGAP2Q8N6H7 521 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 GPR101Q96P66 508 aaPredicted RBP8.71□□□□□ -1.01
LAMA3-210ENST00000588770 DKK3Q9UBP4 350 aa8.71□□□□□ -1.01
LAMA3-210ENST00000588770 U3KPZ7 1027 aaPredicted RBP8.71□□□□□ -1.01
LAMA3-210ENST00000588770 HIP1RO75146 1068 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 ANP32DO95626 131 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 KCNA2P16389 499 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 GBP1P32455 592 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 KARSQ15046 597 aaKnown RBP8.71□□□□□ -1.02
LAMA3-210ENST00000588770 THOC7Q6I9Y2 204 aaKnown RBP8.71□□□□□ -1.02
LAMA3-210ENST00000588770 NOD2Q9HC29 1040 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 FAM114A2Q9NRY5 505 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 MAP2K7O14733 419 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 SPECC1LQ69YQ0 1117 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 TTC30AQ86WT1 665 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 AOPEPQ8N6M6 819 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 PPP1R14BQ96C90 147 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 C15orf41Q9Y2V0 281 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 C2CD2Q9Y426 696 aa8.71□□□□□ -1.02
LAMA3-210ENST00000588770 ATP1A2P50993 1020 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 MAGEC3Q8TD91 643 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 DDX54Q8TDD1 881 aaKnown RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 SSH1Q8WYL5 1049 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 ATXN10Q9UBB4 475 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 UNC13AQ9UPW8 1703 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 INSRP06213 1382 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 FAM163BP0C2L3 166 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 NAT2P11245 290 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 RFC1P35251 1148 aaPredicted RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 MRPS35P82673 323 aaKnown RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 PPFIBP1Q86W92 1011 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 RPAP2Q8IXW5 612 aaPredicted RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 CACNA2D3Q8IZS8 1091 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 KLHDC4Q8TBB5 520 aa8.7□□□□□ -1.02
LAMA3-210ENST00000588770 SNRNP27Q8WVK2 155 aaKnown RBP8.7□□□□□ -1.02
LAMA3-210ENST00000588770 OSBPL10Q9BXB5 764 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms