RNA–Protein interactions for RNA: ENST00000588520.1

RFX1-203, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-203ENST00000588520 ZNF112Q9UJU3 913 aa20.91■□□□□ 0.94
RFX1-203ENST00000588520 PCDHB15Q9Y5E8 787 aa20.91■□□□□ 0.94
RFX1-203ENST00000588520 DOCK2Q92608 1830 aa20.9■□□□□ 0.94
RFX1-203ENST00000588520 SPDYE5A6NIY4 337 aa20.9■□□□□ 0.94
RFX1-203ENST00000588520 MAP3K10Q02779 954 aa20.9■□□□□ 0.94
RFX1-203ENST00000588520 ZSCAN29Q8IWY8 852 aaPredicted RBP20.9■□□□□ 0.94
RFX1-203ENST00000588520 OPTNQ96CV9 577 aa20.9■□□□□ 0.94
RFX1-203ENST00000588520 TBC1D12O60347 775 aa20.89■□□□□ 0.93
RFX1-203ENST00000588520 PICALMQ13492 652 aa20.89■□□□□ 0.93
RFX1-203ENST00000588520 NOM1Q5C9Z4 860 aaKnown RBP20.89■□□□□ 0.93
RFX1-203ENST00000588520 OTUD7BQ6GQQ9 843 aa20.89■□□□□ 0.93
RFX1-203ENST00000588520 ERO1BQ86YB8 467 aa20.89■□□□□ 0.93
RFX1-203ENST00000588520 TEX11Q8IYF3 940 aa20.89■□□□□ 0.93
RFX1-203ENST00000588520 GPATCH3Q96I76 525 aa20.89■□□□□ 0.93
RFX1-203ENST00000588520 OSBPL5Q9H0X9 879 aaPredicted RBP20.89■□□□□ 0.93
RFX1-203ENST00000588520 DHX36Q9H2U1 1008 aaKnown RBP20.89■□□□□ 0.93
RFX1-203ENST00000588520 ELP3Q9H9T3 547 aa20.89■□□□□ 0.93
RFX1-203ENST00000588520 DDX4Q9NQI0 724 aaKnown RBP20.89■□□□□ 0.93
RFX1-203ENST00000588520 AATFQ9NY61 560 aaKnown RBP eCLIP20.89■□□□□ 0.93
RFX1-203ENST00000588520 TESPA1A2RU30 521 aaPredicted RBP20.88■□□□□ 0.93
RFX1-203ENST00000588520 TRPA1O75762 1119 aa20.88■□□□□ 0.93
RFX1-203ENST00000588520 CYP7A1P22680 504 aa20.88■□□□□ 0.93
RFX1-203ENST00000588520 NOL9Q5SY16 702 aaKnown RBP20.88■□□□□ 0.93
RFX1-203ENST00000588520 MIGA2Q7L4E1 593 aa20.88■□□□□ 0.93
RFX1-203ENST00000588520 ZFPM1Q8IX07 1006 aa20.88■□□□□ 0.93
RFX1-203ENST00000588520 ANTXR1Q9H6X2 564 aa20.88■□□□□ 0.93
RFX1-203ENST00000588520 AK9Q5TCS8 1911 aa20.88■□□□□ 0.93
RFX1-203ENST00000588520 GTF2A2P52657 109 aa20.87■□□□□ 0.93
RFX1-203ENST00000588520 MKRN3Q13064 507 aaKnown RBP20.87■□□□□ 0.93
RFX1-203ENST00000588520 HDAC1Q13547 482 aaPredicted RBP20.87■□□□□ 0.93
RFX1-203ENST00000588520 MAGEB6Q8N7X4 407 aa20.87■□□□□ 0.93
RFX1-203ENST00000588520 HAUS7Q99871 368 aa20.87■□□□□ 0.93
RFX1-203ENST00000588520 ECHDC1Q9NTX5 307 aa20.87■□□□□ 0.93
RFX1-203ENST00000588520 SNCAIPQ9Y6H5 919 aa20.87■□□□□ 0.93
RFX1-203ENST00000588520 PPATQ06203 517 aa20.86■□□□□ 0.93
RFX1-203ENST00000588520 SH3BP5LQ7L8J4 393 aa20.86■□□□□ 0.93
RFX1-203ENST00000588520 ADGRA1Q86SQ6 560 aa20.86■□□□□ 0.93
RFX1-203ENST00000588520 SH3RF3Q8TEJ3 882 aaPredicted RBP20.86■□□□□ 0.93
RFX1-203ENST00000588520 GCC1Q96CN9 775 aa20.86■□□□□ 0.93
RFX1-203ENST00000588520 PAG1Q9NWQ8 432 aa20.86■□□□□ 0.93
RFX1-203ENST00000588520 DDTLA6NHG4 134 aaPredicted RBP20.85■□□□□ 0.93
RFX1-203ENST00000588520 GOLIM4O00461 696 aa20.85■□□□□ 0.93
RFX1-203ENST00000588520 GJA5P36382 358 aa20.85■□□□□ 0.93
RFX1-203ENST00000588520 PPIL2Q13356 520 aa20.85■□□□□ 0.93
RFX1-203ENST00000588520 IFNL1Q8IU54 200 aa20.85■□□□□ 0.93
RFX1-203ENST00000588520 TNS4Q8IZW8 715 aa20.85■□□□□ 0.93
RFX1-203ENST00000588520 ZKSCAN4Q969J2 545 aaPredicted RBP20.85■□□□□ 0.93
RFX1-203ENST00000588520 DNAJC2Q99543 621 aaKnown RBP20.85■□□□□ 0.93
RFX1-203ENST00000588520 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.85■□□□□ 0.93
RFX1-203ENST00000588520 PI4KBQ9UBF8 816 aa20.85■□□□□ 0.93
RFX1-203ENST00000588520 HERC5Q9UII4 1024 aaKnown RBP20.85■□□□□ 0.93
RFX1-203ENST00000588520 MYO5AQ9Y4I1 1855 aaKnown RBP20.85■□□□□ 0.93
RFX1-203ENST00000588520 SLC9C2Q5TAH2 1124 aa20.84■□□□□ 0.93
RFX1-203ENST00000588520 OTUD5Q96G74 571 aa20.84■□□□□ 0.93
RFX1-203ENST00000588520 BOLA2Q9H3K6 86 aa20.84■□□□□ 0.93
RFX1-203ENST00000588520 ZCCHC17Q9NP64 241 aaKnown RBP20.84■□□□□ 0.93
RFX1-203ENST00000588520 ZBTB47Q9UFB7 747 aaPredicted RBP20.84■□□□□ 0.93
RFX1-203ENST00000588520 TSKSQ9UJT2 592 aa20.84■□□□□ 0.93
RFX1-203ENST00000588520 NDUFB9Q9Y6M9 179 aa20.84■□□□□ 0.93
RFX1-203ENST00000588520 FOCADQ5VW36 1801 aa20.83■□□□□ 0.93
RFX1-203ENST00000588520 FLT1P17948 1338 aa20.83■□□□□ 0.93
RFX1-203ENST00000588520 TTC41PQ6P2S7 1318 aa20.83■□□□□ 0.93
RFX1-203ENST00000588520 PHF20L1A8MW92 1017 aa20.83■□□□□ 0.93
RFX1-203ENST00000588520 SMARCA5O60264 1052 aaPredicted RBP20.83■□□□□ 0.93
RFX1-203ENST00000588520 CTNND1O60716 968 aaKnown RBP20.83■□□□□ 0.93
RFX1-203ENST00000588520 INPP5BP32019 993 aa20.83■□□□□ 0.93
RFX1-203ENST00000588520 ZSCAN25Q6NSZ9 544 aa20.83■□□□□ 0.93
RFX1-203ENST00000588520 SCYL3Q8IZE3 742 aa20.83■□□□□ 0.93
RFX1-203ENST00000588520 MS4A4AQ96JQ5 239 aa20.83■□□□□ 0.93
RFX1-203ENST00000588520 CETPP11597 493 aa20.82■□□□□ 0.92
RFX1-203ENST00000588520 PDE6AP16499 860 aa20.82■□□□□ 0.92
RFX1-203ENST00000588520 SNAPC2Q13487 334 aa20.82■□□□□ 0.92
RFX1-203ENST00000588520 TGFBRAP1Q8WUH2 860 aa20.82■□□□□ 0.92
RFX1-203ENST00000588520 FOXP4Q8IVH2 680 aaPredicted RBP20.81■□□□□ 0.92
RFX1-203ENST00000588520 TBC1D2Q9BYX2 928 aa20.81■□□□□ 0.92
RFX1-203ENST00000588520 BCL11AQ9H165 835 aa20.81■□□□□ 0.92
RFX1-203ENST00000588520 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.81■□□□□ 0.92
RFX1-203ENST00000588520 PICK1Q9NRD5 415 aa20.81■□□□□ 0.92
RFX1-203ENST00000588520 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.81■□□□□ 0.92
RFX1-203ENST00000588520 KCNH4Q9UQ05 1017 aa20.81■□□□□ 0.92
RFX1-203ENST00000588520 CCL15-CCL14A0A0B4J2E2 113 aa20.8■□□□□ 0.92
RFX1-203ENST00000588520 MAGEB6P1A0A0J9YX57 407 aa20.8■□□□□ 0.92
RFX1-203ENST00000588520 IGF2BP3O00425 579 aaKnown RBP eCLIP20.8■□□□□ 0.92
RFX1-203ENST00000588520 IRF6O14896 467 aa20.8■□□□□ 0.92
RFX1-203ENST00000588520 ERC2O15083 957 aa20.8■□□□□ 0.92
RFX1-203ENST00000588520 HLA-DOAP06340 250 aa20.8■□□□□ 0.92
RFX1-203ENST00000588520 UBE3CQ15386 1083 aa20.8■□□□□ 0.92
RFX1-203ENST00000588520 CCL15Q16663 113 aa20.8■□□□□ 0.92
RFX1-203ENST00000588520 METTL16Q86W50 562 aaKnown RBP20.8■□□□□ 0.92
RFX1-203ENST00000588520 MIGA1Q8NAN2 632 aa20.8■□□□□ 0.92
RFX1-203ENST00000588520 CNKSR2Q8WXI2 1034 aa20.8■□□□□ 0.92
RFX1-203ENST00000588520 RIOK1Q9BRS2 568 aaKnown RBP20.8■□□□□ 0.92
RFX1-203ENST00000588520 ZNF532Q9HCE3 1301 aa20.79■□□□□ 0.92
RFX1-203ENST00000588520 TCRBV5S4A2TA0A5A2 114 aa20.79■□□□□ 0.92
RFX1-203ENST00000588520 CXCL11O14625 94 aa20.79■□□□□ 0.92
RFX1-203ENST00000588520 ADD2P35612 726 aa20.79■□□□□ 0.92
RFX1-203ENST00000588520 USP5P45974 858 aa20.79■□□□□ 0.92
RFX1-203ENST00000588520 DYNLL1P63167 89 aaKnown RBP20.79■□□□□ 0.92
RFX1-203ENST00000588520 IFFO2Q5TF58 517 aa20.79■□□□□ 0.92
RFX1-203ENST00000588520 MAPKAPK5Q8IW41 473 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms