RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 MYO3BQ8WXR4 1341 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 MINDY4BA8MYZ0 360 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 IARSP41252 1262 aaKnown RBP12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 BTDP43251 543 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 MMP14P50281 582 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 PPARAQ07869 468 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 DIXDC1Q155Q3 683 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 NIM1KQ8IY84 436 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 SDR42E1Q8WUS8 393 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 FAM212AQ96EL1 285 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 TMEM87BQ96K49 555 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 AGXT2Q9BYV1 514 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 SLKQ9H2G2 1235 aaPredicted RBP12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 TAOK3Q9H2K8 898 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 DCP1AQ9NPI6 582 aaPredicted RBP12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 ARPP21Q9UBL0 812 aaPredicted RBP12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 ZNRF3Q9ULT6 936 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 BCS1LQ9Y276 419 aa12.4□□□□□ -0.42
CHMP1B-202ENST00000588284 USP17L12C9JPN9 530 aa12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 USP17L21D6R901 530 aa12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 PDIA4P13667 645 aaKnown RBP12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 YY1P25490 414 aa12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 CTR9Q6PD62 1173 aa12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 NOL8Q76FK4 1167 aaKnown RBP12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 MB21D2Q8IYB1 491 aaPredicted RBP12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 TEX11Q8IYF3 940 aa12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 TMTC2Q8N394 836 aa12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 CERS5Q8N5B7 392 aa12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 SH3RF3Q8TEJ3 882 aaPredicted RBP12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 JDP2Q8WYK2 163 aa12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 ZNF274Q96GC6 653 aaPredicted RBP12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 ZNF277Q9NRM2 450 aaPredicted RBP12.39□□□□□ -0.43
CHMP1B-202ENST00000588284 F8W031 263 aaPredicted RBP12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 PRC1O43663 620 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 VIL1P09327 827 aaKnown RBP12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 NUCB2P80303 420 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 CTDSPL2Q05D32 466 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 PDE4BQ07343 736 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 TOB2Q14106 344 aaPredicted RBP12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 SART3Q15020 963 aaKnown RBP12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 ESR2Q92731 530 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 ZNF287Q9HBT7 754 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 MCM9Q9NXL9 1143 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 SERPINA10Q9UK55 444 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 HDAC9Q9UKV0 1011 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 DAGLAQ9Y4D2 1042 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 MAST2Q6P0Q8 1798 aa12.38□□□□□ -0.43
CHMP1B-202ENST00000588284 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 ERICH2A1L162 156 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 POLR3DP05423 398 aaPredicted RBP12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 FGRP09769 529 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 CRKP46108 304 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 EVCP57679 992 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 GSE1Q14687 1217 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 TNIP1Q15025 636 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 RSBN1LQ6PCB5 846 aaPredicted RBP12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 TBC1D10CQ8IV04 446 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 TGFBRAP1Q8WUH2 860 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 BRF1Q92994 677 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 ZDHHC15Q96MV8 337 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 NBPF3Q9H094 633 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 RTN4Q9NQC3 1192 aaKnown RBP12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 KCNQ5Q9NR82 932 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 TOMM22Q9NS69 142 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 USP40Q9NVE5 1235 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 MKRN1Q9UHC7 482 aaKnown RBP12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 TPCN1Q9ULQ1 816 aa12.37□□□□□ -0.43
CHMP1B-202ENST00000588284 YDJCA8MPS7 323 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 B4E1Z4 1266 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 DDIT3P35638 169 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 LIFRP42702 1097 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 RHBDL3P58872 404 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 ME3Q16798 604 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 CCDC178Q5BJE1 867 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 TTC6Q86TZ1 520 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 KIAA0825Q8IV33 1275 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 OGFOD1Q8N543 542 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 AGBL3Q8NEM8 1001 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 TCEANC2Q96MN5 208 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 ZSWIM5Q9P217 1185 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 SMC3Q9UQE7 1217 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 KIAA1551Q9HCM1 1747 aa12.36□□□□□ -0.43
CHMP1B-202ENST00000588284 CHD4Q14839 1912 aa12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 IFIT3O14879 490 aaKnown RBP12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 ORC4O43929 436 aa12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 DHX16O60231 1041 aaKnown RBP12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 PFKFB2O60825 505 aa12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 KDM4AO75164 1064 aa12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 SCNN1DP51172 638 aa12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 RBM5P52756 815 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 CIAPIN1Q6FI81 312 aa12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 SYNE3Q6ZMZ3 975 aa12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 LARP6Q9BRS8 491 aaKnown RBP12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 LLPHQ9BRT6 129 aaKnown RBP12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 MXD3Q9BW11 206 aa12.35□□□□□ -0.43
CHMP1B-202ENST00000588284 ANGEL1Q9UNK9 670 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms