RNA–Protein interactions for RNA: ENST00000588200.1

PKN1-211, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 548 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-211ENST00000588200 HMG20BQ9P0W2 317 aa16.48■□□□□ 0.23
PKN1-211ENST00000588200 ABCF2Q9UG63 623 aa16.48■□□□□ 0.23
PKN1-211ENST00000588200 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.48■□□□□ 0.23
PKN1-211ENST00000588200 ADGRA2Q96PE1 1338 aa16.47■□□□□ 0.23
PKN1-211ENST00000588200 LDHCP07864 332 aa16.47■□□□□ 0.23
PKN1-211ENST00000588200 RHBDL3P58872 404 aa16.47■□□□□ 0.23
PKN1-211ENST00000588200 G3BP1Q13283 466 aaKnown RBP eCLIP16.47■□□□□ 0.23
PKN1-211ENST00000588200 SH3BP5LQ7L8J4 393 aa16.47■□□□□ 0.23
PKN1-211ENST00000588200 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
PKN1-211ENST00000588200 SSH3Q8TE77 659 aa16.47■□□□□ 0.23
PKN1-211ENST00000588200 NSUN4Q96CB9 384 aaKnown RBP16.47■□□□□ 0.23
PKN1-211ENST00000588200 CTNND1O60716 968 aaKnown RBP16.46■□□□□ 0.23
PKN1-211ENST00000588200 UQCRFS1P1P0C7P4 283 aa16.46■□□□□ 0.23
PKN1-211ENST00000588200 GSTO1P78417 241 aa16.46■□□□□ 0.23
PKN1-211ENST00000588200 MECOMQ03112 1051 aa16.46■□□□□ 0.23
PKN1-211ENST00000588200 KIF22Q14807 665 aa16.46■□□□□ 0.23
PKN1-211ENST00000588200 SCYL3Q8IZE3 742 aa16.46■□□□□ 0.23
PKN1-211ENST00000588200 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.46■□□□□ 0.23
PKN1-211ENST00000588200 SPATA5Q8NB90 893 aa16.46■□□□□ 0.23
PKN1-211ENST00000588200 FRAT1Q92837 279 aaPredicted RBP16.46■□□□□ 0.23
PKN1-211ENST00000588200 ZNF512BQ96KM6 892 aaPredicted RBP16.46■□□□□ 0.23
PKN1-211ENST00000588200 SLC45A1Q9Y2W3 748 aa16.46■□□□□ 0.23
PKN1-211ENST00000588200 PHIPQ8WWQ0 1821 aa16.45■□□□□ 0.22
PKN1-211ENST00000588200 PTPRFP10586 1907 aa16.45■□□□□ 0.22
PKN1-211ENST00000588200 A0A0G2JLL6 359 aaPredicted RBP16.45■□□□□ 0.22
PKN1-211ENST00000588200 DDTLA6NHG4 134 aaPredicted RBP16.45■□□□□ 0.22
PKN1-211ENST00000588200 PDHXO00330 501 aa16.45■□□□□ 0.22
PKN1-211ENST00000588200 BTDP43251 543 aa16.45■□□□□ 0.22
PKN1-211ENST00000588200 ATP8B2P98198 1209 aa16.45■□□□□ 0.22
PKN1-211ENST00000588200 PRRT2Q7Z6L0 340 aaPredicted RBP16.45■□□□□ 0.22
PKN1-211ENST00000588200 TMEM57Q8N5G2 664 aa16.45■□□□□ 0.22
PKN1-211ENST00000588200 NEUROD6Q96NK8 337 aa16.45■□□□□ 0.22
PKN1-211ENST00000588200 DDX4Q9NQI0 724 aaKnown RBP16.45■□□□□ 0.22
PKN1-211ENST00000588200 TNNQ9UQP3 1299 aa16.45■□□□□ 0.22
PKN1-211ENST00000588200 NOP58Q9Y2X3 529 aaKnown RBP16.45■□□□□ 0.22
PKN1-211ENST00000588200 AFG3L2Q9Y4W6 797 aa16.45■□□□□ 0.22
PKN1-211ENST00000588200 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
PKN1-211ENST00000588200 PTPRAP18433 802 aa16.44■□□□□ 0.22
PKN1-211ENST00000588200 GPAT2Q6NUI2 795 aa16.44■□□□□ 0.22
PKN1-211ENST00000588200 FASTKD5Q7L8L6 764 aaKnown RBP16.44■□□□□ 0.22
PKN1-211ENST00000588200 PTCH2Q9Y6C5 1203 aa16.44■□□□□ 0.22
PKN1-211ENST00000588200 DOCK1Q14185 1865 aa16.44■□□□□ 0.22
PKN1-211ENST00000588200 ZBTB7BO15156 539 aaPredicted RBP16.43■□□□□ 0.22
PKN1-211ENST00000588200 BCRP11274 1271 aa16.43■□□□□ 0.22
PKN1-211ENST00000588200 MCAMP43121 646 aa16.43■□□□□ 0.22
PKN1-211ENST00000588200 SLC9C1Q4G0N8 1177 aa16.43■□□□□ 0.22
PKN1-211ENST00000588200 CLUAP1Q96AJ1 413 aa16.43■□□□□ 0.22
PKN1-211ENST00000588200 PARK7Q99497 189 aaKnown RBP16.43■□□□□ 0.22
PKN1-211ENST00000588200 TBC1D2Q9BYX2 928 aa16.43■□□□□ 0.22
PKN1-211ENST00000588200 PPP4CP60510 307 aa16.42■□□□□ 0.22
PKN1-211ENST00000588200 GORABQ5T7V8 394 aa16.42■□□□□ 0.22
PKN1-211ENST00000588200 TMEM106CQ9BVX2 250 aa16.42■□□□□ 0.22
PKN1-211ENST00000588200 PICK1Q9NRD5 415 aa16.42■□□□□ 0.22
PKN1-211ENST00000588200 SRRDQ9UH36 339 aa16.42■□□□□ 0.22
PKN1-211ENST00000588200 ZHX2Q9Y6X8 837 aa16.42■□□□□ 0.22
PKN1-211ENST00000588200 ZSWIM8A7E2V4 1837 aa16.41■□□□□ 0.22
PKN1-211ENST00000588200 HOXD10P28358 340 aa16.41■□□□□ 0.22
PKN1-211ENST00000588200 TNNI3KQ59H18 835 aa16.41■□□□□ 0.22
PKN1-211ENST00000588200 TMED8Q6PL24 325 aaPredicted RBP16.41■□□□□ 0.22
PKN1-211ENST00000588200 PI16Q6UXB8 463 aa16.41■□□□□ 0.22
PKN1-211ENST00000588200 ZSCAN29Q8IWY8 852 aaPredicted RBP16.41■□□□□ 0.22
PKN1-211ENST00000588200 ARHGAP39Q9C0H5 1083 aa16.41■□□□□ 0.22
PKN1-211ENST00000588200 OSBPL5Q9H0X9 879 aaPredicted RBP16.41■□□□□ 0.22
PKN1-211ENST00000588200 FPGT-TNNI3KV9GXZ4 949 aa16.41■□□□□ 0.22
PKN1-211ENST00000588200 MGAMO43451 1857 aa16.4■□□□□ 0.22
PKN1-211ENST00000588200 CTGFP29279 349 aa16.4■□□□□ 0.22
PKN1-211ENST00000588200 PSMC4P43686 418 aa16.4■□□□□ 0.22
PKN1-211ENST00000588200 CCDC158Q5M9N0 1113 aa16.4■□□□□ 0.22
PKN1-211ENST00000588200 TBC1D9Q6ZT07 1266 aa16.4■□□□□ 0.22
PKN1-211ENST00000588200 METTL16Q86W50 562 aaKnown RBP16.4■□□□□ 0.22
PKN1-211ENST00000588200 TRIM47Q96LD4 638 aa16.4■□□□□ 0.22
PKN1-211ENST00000588200 HERC5Q9UII4 1024 aaKnown RBP16.4■□□□□ 0.22
PKN1-211ENST00000588200 MAST2Q6P0Q8 1798 aa16.4■□□□□ 0.22
PKN1-211ENST00000588200 PLCG2P16885 1265 aa16.39■□□□□ 0.21
PKN1-211ENST00000588200 EN2P19622 333 aaPredicted RBP16.39■□□□□ 0.21
PKN1-211ENST00000588200 HNRNPUQ00839 825 aaKnown RBP eCLIP16.39■□□□□ 0.21
PKN1-211ENST00000588200 GCC1Q96CN9 775 aa16.39■□□□□ 0.21
PKN1-211ENST00000588200 DHX36Q9H2U1 1008 aaKnown RBP16.39■□□□□ 0.21
PKN1-211ENST00000588200 RAI14Q9P0K7 980 aa16.39■□□□□ 0.21
PKN1-211ENST00000588200 CPA4Q9UI42 421 aa16.39■□□□□ 0.21
PKN1-211ENST00000588200 FOCADQ5VW36 1801 aa16.39■□□□□ 0.21
PKN1-211ENST00000588200 SURF6O75683 361 aaKnown RBP16.38■□□□□ 0.21
PKN1-211ENST00000588200 BAG3O95817 575 aa16.38■□□□□ 0.21
PKN1-211ENST00000588200 CAPN2P17655 700 aa16.38■□□□□ 0.21
PKN1-211ENST00000588200 OSBPP22059 807 aa16.38■□□□□ 0.21
PKN1-211ENST00000588200 PICALMQ13492 652 aa16.38■□□□□ 0.21
PKN1-211ENST00000588200 MIER1Q8N108 512 aa16.38■□□□□ 0.21
PKN1-211ENST00000588200 PROCA1Q8NCQ7 364 aaPredicted RBP16.38■□□□□ 0.21
PKN1-211ENST00000588200 GINM1Q9NU53 330 aa16.38■□□□□ 0.21
PKN1-211ENST00000588200 LRP2BPQ9P2M1 347 aa16.38■□□□□ 0.21
PKN1-211ENST00000588200 ZBED9Q6R2W3 1325 aa16.38■□□□□ 0.21
PKN1-211ENST00000588200 CDK5RAP2Q96SN8 1893 aa16.37■□□□□ 0.21
PKN1-211ENST00000588200 LOC285556D6RIA3 1793 aa16.37■□□□□ 0.21
PKN1-211ENST00000588200 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
PKN1-211ENST00000588200 RLBP1P12271 317 aa16.37■□□□□ 0.21
PKN1-211ENST00000588200 FTSJ3Q8IY81 847 aaKnown RBP16.37■□□□□ 0.21
PKN1-211ENST00000588200 DBNDD2Q9BQY9 259 aa16.37■□□□□ 0.21
PKN1-211ENST00000588200 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.21
PKN1-211ENST00000588200 PCDH10Q9P2E7 1040 aa16.37■□□□□ 0.21
PKN1-211ENST00000588200 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms