RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 TMEM67Q5HYA8 995 aa23.32■■□□□ 1.32
TRIM47-204ENST00000587339 TTLL6Q8N841 843 aa23.32■■□□□ 1.32
TRIM47-204ENST00000587339 ESR2Q92731 530 aa23.32■■□□□ 1.32
TRIM47-204ENST00000587339 DBNDD1Q9H9R9 158 aa23.32■■□□□ 1.32
TRIM47-204ENST00000587339 IFIT3O14879 490 aaKnown RBP23.31■■□□□ 1.32
TRIM47-204ENST00000587339 ZBTB7AO95365 584 aa23.31■■□□□ 1.32
TRIM47-204ENST00000587339 SART3Q15020 963 aaKnown RBP23.31■■□□□ 1.32
TRIM47-204ENST00000587339 SBK1Q52WX2 424 aa23.31■■□□□ 1.32
TRIM47-204ENST00000587339 SMARCC2Q8TAQ2 1214 aa23.31■■□□□ 1.32
TRIM47-204ENST00000587339 MCM9Q9NXL9 1143 aa23.31■■□□□ 1.32
TRIM47-204ENST00000587339 SMIM22K7EJ46 135 aa23.31■■□□□ 1.32
TRIM47-204ENST00000587339 C21orf2O43822 256 aa23.31■■□□□ 1.32
TRIM47-204ENST00000587339 DHX16O60231 1041 aaKnown RBP23.31■■□□□ 1.32
TRIM47-204ENST00000587339 NSUN7Q8NE18 718 aaKnown RBP23.31■■□□□ 1.32
TRIM47-204ENST00000587339 MYH2Q9UKX2 1941 aa23.31■■□□□ 1.32
TRIM47-204ENST00000587339 MTMR6Q9Y217 621 aa23.31■■□□□ 1.32
TRIM47-204ENST00000587339 GAKO14976 1311 aa23.3■■□□□ 1.32
TRIM47-204ENST00000587339 VPS37CA5D8V6 355 aaPredicted RBP23.3■■□□□ 1.32
TRIM47-204ENST00000587339 CTDNEP1O95476 244 aa23.3■■□□□ 1.32
TRIM47-204ENST00000587339 PLCG2P16885 1265 aa23.3■■□□□ 1.32
TRIM47-204ENST00000587339 LIFRP42702 1097 aa23.3■■□□□ 1.32
TRIM47-204ENST00000587339 HMGN5P82970 282 aaKnown RBP23.3■■□□□ 1.32
TRIM47-204ENST00000587339 SGMS1Q86VZ5 419 aa23.3■■□□□ 1.32
TRIM47-204ENST00000587339 CERS5Q8N5B7 392 aa23.3■■□□□ 1.32
TRIM47-204ENST00000587339 MTA3Q9BTC8 594 aa23.3■■□□□ 1.32
TRIM47-204ENST00000587339 LY9Q9HBG7 655 aa23.3■■□□□ 1.32
TRIM47-204ENST00000587339 MKRN1Q9UHC7 482 aaKnown RBP23.3■■□□□ 1.32
TRIM47-204ENST00000587339 HPS5Q9UPZ3 1129 aa23.3■■□□□ 1.32
TRIM47-204ENST00000587339 ERICH2A1L162 156 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 PTPDC1A2A3K4 754 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 TRAK2O60296 914 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 F13A1P00488 732 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 SLC3A2P08195 630 aaKnown RBP23.29■■□□□ 1.32
TRIM47-204ENST00000587339 FGRP09769 529 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 NFXL1Q6ZNB6 911 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 FAM184AQ8NB25 1140 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 SUPT20HQ8NEM7 779 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 DDX11Q96FC9 970 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 SNED1Q8TER0 1413 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 DLEC1Q9Y238 1755 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 DPEP1P16444 411 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 GRIPAP1Q4V328 841 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 TGFBRAP1Q8WUH2 860 aa23.29■■□□□ 1.32
TRIM47-204ENST00000587339 APOA5Q6Q788 366 aa23.28■■□□□ 1.32
TRIM47-204ENST00000587339 ZKSCAN3Q9BRR0 538 aa23.28■■□□□ 1.32
TRIM47-204ENST00000587339 UBAC1Q9BSL1 405 aa23.28■■□□□ 1.32
TRIM47-204ENST00000587339 MTFR1LQ9H019 292 aa23.28■■□□□ 1.32
TRIM47-204ENST00000587339 TTF2Q9UNY4 1162 aaKnown RBP23.28■■□□□ 1.32
TRIM47-204ENST00000587339 KIF3AQ9Y496 699 aa23.28■■□□□ 1.32
TRIM47-204ENST00000587339 ATP6V1DQ9Y5K8 247 aa23.28■■□□□ 1.32
TRIM47-204ENST00000587339 GOLGB1Q14789 3259 aaKnown RBP23.28■■□□□ 1.32
TRIM47-204ENST00000587339 F8W031 263 aaPredicted RBP23.27■■□□□ 1.32
TRIM47-204ENST00000587339 ECE2O60344 883 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 USP17L8P0C7I0 530 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 KCNA3P22001 575 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 POLD1P28340 1107 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 AMOTL1Q8IY63 956 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 CHAMP1Q96JM3 812 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 SENP2Q9HC62 589 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 ATF5Q9Y2D1 282 aaPredicted RBP23.27■■□□□ 1.32
TRIM47-204ENST00000587339 CCDC69A6NI79 296 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 PRDM1O75626 825 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 CYP2D6P10635 497 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 KIAA2012Q0VF49 1180 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 AOC3Q16853 763 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 FOXD4L6Q3SYB3 417 aaPredicted RBP23.27■■□□□ 1.32
TRIM47-204ENST00000587339 FOXD4L3Q6VB84 417 aaPredicted RBP23.27■■□□□ 1.32
TRIM47-204ENST00000587339 RAB11FIP4Q86YS3 637 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 TEX11Q8IYF3 940 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 MXD3Q9BW11 206 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 DAGLAQ9Y4D2 1042 aa23.27■■□□□ 1.32
TRIM47-204ENST00000587339 CPLX1O14810 134 aa23.26■■□□□ 1.31
TRIM47-204ENST00000587339 RANBP6O60518 1105 aaKnown RBP23.26■■□□□ 1.31
TRIM47-204ENST00000587339 METAP2P50579 478 aaKnown RBP eCLIP23.26■■□□□ 1.31
TRIM47-204ENST00000587339 PDE4BQ07343 736 aa23.26■■□□□ 1.31
TRIM47-204ENST00000587339 WTAPQ15007 396 aa23.26■■□□□ 1.31
TRIM47-204ENST00000587339 CCDC93Q567U6 631 aa23.26■■□□□ 1.31
TRIM47-204ENST00000587339 TMTC2Q8N394 836 aa23.26■■□□□ 1.31
TRIM47-204ENST00000587339 KCNQ5Q9NR82 932 aa23.26■■□□□ 1.31
TRIM47-204ENST00000587339 SLC12A7Q9Y666 1083 aa23.26■■□□□ 1.31
TRIM47-204ENST00000587339 LAMB1P07942 1786 aa23.26■■□□□ 1.31
TRIM47-204ENST00000587339 ZBTB43O43298 467 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 RHBDL3P58872 404 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 EVX2Q03828 476 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 SKOR2Q2VWA4 1001 aaPredicted RBP23.25■■□□□ 1.31
TRIM47-204ENST00000587339 C12orf60Q5U649 245 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 STRIP1Q5VSL9 837 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 MAPKAPK5Q8IW41 473 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 RTKN2Q8IZC4 609 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.25■■□□□ 1.31
TRIM47-204ENST00000587339 ORC4O43929 436 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 SLC4A8Q2Y0W8 1093 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 SYNE3Q6ZMZ3 975 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 CDC37L1Q7L3B6 337 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 MICU3Q86XE3 530 aa23.25■■□□□ 1.31
TRIM47-204ENST00000587339 R3HDM1Q15032 1099 aaKnown RBP23.24■■□□□ 1.31
TRIM47-204ENST00000587339 ILDR1Q86SU0 546 aaPredicted RBP23.24■■□□□ 1.31
TRIM47-204ENST00000587339 IQCA1Q86XH1 822 aa23.24■■□□□ 1.31
TRIM47-204ENST00000587339 TNKSO95271 1327 aa23.24■■□□□ 1.31
TRIM47-204ENST00000587339 PPIP5K2O43314 1243 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms