RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CYP7A1P22680 504 aa18.03■□□□□ 0.48
ATG4D-207ENST00000587256 MAP3K9P80192 1104 aa18.03■□□□□ 0.48
ATG4D-207ENST00000587256 COL13A1Q5TAT6 717 aaPredicted RBP18.03■□□□□ 0.48
ATG4D-207ENST00000587256 ZFPM1Q8IX07 1006 aa18.03■□□□□ 0.48
ATG4D-207ENST00000587256 MAGEB6Q8N7X4 407 aa18.03■□□□□ 0.48
ATG4D-207ENST00000587256 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.02■□□□□ 0.48
ATG4D-207ENST00000587256 ADGRA1Q86SQ6 560 aa18.02■□□□□ 0.48
ATG4D-207ENST00000587256 SH3RF3Q8TEJ3 882 aaPredicted RBP18.02■□□□□ 0.48
ATG4D-207ENST00000587256 GPATCH3Q96I76 525 aa18.02■□□□□ 0.48
ATG4D-207ENST00000587256 PRDM10Q9NQV6 1147 aa18.02■□□□□ 0.48
ATG4D-207ENST00000587256 SAGE1Q9NXZ1 904 aa18.02■□□□□ 0.48
ATG4D-207ENST00000587256 TRPA1O75762 1119 aa18.01■□□□□ 0.47
ATG4D-207ENST00000587256 ATP5JP18859 108 aa18.01■□□□□ 0.47
ATG4D-207ENST00000587256 OPTNQ96CV9 577 aa18.01■□□□□ 0.47
ATG4D-207ENST00000587256 BOLA2Q9H3K6 86 aa18.01■□□□□ 0.47
ATG4D-207ENST00000587256 RNF186Q9NXI6 227 aa18.01■□□□□ 0.47
ATG4D-207ENST00000587256 MANSC4A6NHS7 340 aaPredicted RBP18■□□□□ 0.47
ATG4D-207ENST00000587256 NPM3O75607 178 aaKnown RBP18■□□□□ 0.47
ATG4D-207ENST00000587256 AAMPQ13685 434 aa18■□□□□ 0.47
ATG4D-207ENST00000587256 MIGA1Q8NAN2 632 aa18■□□□□ 0.47
ATG4D-207ENST00000587256 ZKSCAN4Q969J2 545 aaPredicted RBP18■□□□□ 0.47
ATG4D-207ENST00000587256 OTUD5Q96G74 571 aa18■□□□□ 0.47
ATG4D-207ENST00000587256 OSBPL5Q9H0X9 879 aaPredicted RBP18■□□□□ 0.47
ATG4D-207ENST00000587256 ECHDC1Q9NTX5 307 aa18■□□□□ 0.47
ATG4D-207ENST00000587256 PAG1Q9NWQ8 432 aa18■□□□□ 0.47
ATG4D-207ENST00000587256 ZBTB47Q9UFB7 747 aaPredicted RBP18■□□□□ 0.47
ATG4D-207ENST00000587256 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
ATG4D-207ENST00000587256 SNCAIPQ9Y6H5 919 aa18■□□□□ 0.47
ATG4D-207ENST00000587256 ATRNL1Q5VV63 1379 aa18■□□□□ 0.47
ATG4D-207ENST00000587256 COL2A1P02458 1487 aaPredicted RBP18■□□□□ 0.47
ATG4D-207ENST00000587256 DDTLA6NHG4 134 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-207ENST00000587256 GJA5P36382 358 aa17.99■□□□□ 0.47
ATG4D-207ENST00000587256 PPP4CP60510 307 aa17.99■□□□□ 0.47
ATG4D-207ENST00000587256 TMED8Q6PL24 325 aaPredicted RBP17.99■□□□□ 0.47
ATG4D-207ENST00000587256 SH3BP5LQ7L8J4 393 aa17.99■□□□□ 0.47
ATG4D-207ENST00000587256 EDC3Q96F86 508 aaKnown RBP17.99■□□□□ 0.47
ATG4D-207ENST00000587256 SPDYE5A6NIY4 337 aa17.98■□□□□ 0.47
ATG4D-207ENST00000587256 PDE6AP16499 860 aa17.98■□□□□ 0.47
ATG4D-207ENST00000587256 INPP5BP32019 993 aa17.98■□□□□ 0.47
ATG4D-207ENST00000587256 DYNLL1P63167 89 aaKnown RBP17.98■□□□□ 0.47
ATG4D-207ENST00000587256 SLC9C2Q5TAH2 1124 aa17.98■□□□□ 0.47
ATG4D-207ENST00000587256 CERS3Q8IU89 383 aa17.98■□□□□ 0.47
ATG4D-207ENST00000587256 MAPKAPK5Q8IW41 473 aa17.98■□□□□ 0.47
ATG4D-207ENST00000587256 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
ATG4D-207ENST00000587256 HAUS7Q99871 368 aa17.98■□□□□ 0.47
ATG4D-207ENST00000587256 FLT1P17948 1338 aa17.98■□□□□ 0.47
ATG4D-207ENST00000587256 LAMB1P07942 1786 aa17.97■□□□□ 0.47
ATG4D-207ENST00000587256 TM4SF4P48230 202 aa17.97■□□□□ 0.47
ATG4D-207ENST00000587256 HDAC1Q13547 482 aaPredicted RBP17.97■□□□□ 0.47
ATG4D-207ENST00000587256 ERO1BQ86YB8 467 aa17.97■□□□□ 0.47
ATG4D-207ENST00000587256 TNS4Q8IZW8 715 aa17.97■□□□□ 0.47
ATG4D-207ENST00000587256 EXOC6Q8TAG9 804 aa17.97■□□□□ 0.47
ATG4D-207ENST00000587256 TGFBRAP1Q8WUH2 860 aa17.97■□□□□ 0.47
ATG4D-207ENST00000587256 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.97■□□□□ 0.474e-6■■■□□ 18.8
ATG4D-207ENST00000587256 FOCADQ5VW36 1801 aa17.96■□□□□ 0.47
ATG4D-207ENST00000587256 INHBEP58166 350 aa17.96■□□□□ 0.47
ATG4D-207ENST00000587256 TSHZ3Q63HK5 1081 aa17.96■□□□□ 0.47
ATG4D-207ENST00000587256 ZNF112Q9UJU3 913 aa17.96■□□□□ 0.47
ATG4D-207ENST00000587256 ZNF532Q9HCE3 1301 aa17.96■□□□□ 0.46
ATG4D-207ENST00000587256 CDK5RAP2Q96SN8 1893 aa17.95■□□□□ 0.46
ATG4D-207ENST00000587256 MAGEB6P1A0A0J9YX57 407 aa17.95■□□□□ 0.46
ATG4D-207ENST00000587256 FAM196BA6NMK8 535 aa17.95■□□□□ 0.46
ATG4D-207ENST00000587256 ALDH1A1P00352 501 aa17.95■□□□□ 0.46
ATG4D-207ENST00000587256 USP5P45974 858 aa17.95■□□□□ 0.46
ATG4D-207ENST00000587256 GTF2A2P52657 109 aa17.95■□□□□ 0.46
ATG4D-207ENST00000587256 NOL9Q5SY16 702 aaKnown RBP17.95■□□□□ 0.46
ATG4D-207ENST00000587256 IFNL1Q8IU54 200 aa17.95■□□□□ 0.46
ATG4D-207ENST00000587256 GCC1Q96CN9 775 aa17.95■□□□□ 0.46
ATG4D-207ENST00000587256 CCL15-CCL14A0A0B4J2E2 113 aa17.94■□□□□ 0.46
ATG4D-207ENST00000587256 PPIL2Q13356 520 aa17.94■□□□□ 0.46
ATG4D-207ENST00000587256 CCL15Q16663 113 aa17.94■□□□□ 0.46
ATG4D-207ENST00000587256 OTUD7BQ6GQQ9 843 aa17.94■□□□□ 0.46
ATG4D-207ENST00000587256 TRIM34Q9BYJ4 488 aa17.94■□□□□ 0.46
ATG4D-207ENST00000587256 DHX36Q9H2U1 1008 aaKnown RBP17.94■□□□□ 0.46
ATG4D-207ENST00000587256 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.94■□□□□ 0.46
ATG4D-207ENST00000587256 PICK1Q9NRD5 415 aa17.94■□□□□ 0.46
ATG4D-207ENST00000587256 SAP30BPQ9UHR5 308 aaKnown RBP17.94■□□□□ 0.46
ATG4D-207ENST00000587256 DOCK1Q14185 1865 aa17.93■□□□□ 0.46
ATG4D-207ENST00000587256 IGF2BP3O00425 579 aaKnown RBP eCLIP17.93■□□□□ 0.46
ATG4D-207ENST00000587256 TBC1D8O95759 1140 aa17.93■□□□□ 0.46
ATG4D-207ENST00000587256 HLA-DOAP06340 250 aa17.93■□□□□ 0.46
ATG4D-207ENST00000587256 SLURP2P0DP57 97 aa17.93■□□□□ 0.46
ATG4D-207ENST00000587256 PPATQ06203 517 aa17.93■□□□□ 0.46
ATG4D-207ENST00000587256 ANKRD45Q5TZF3 282 aa17.93■□□□□ 0.46
ATG4D-207ENST00000587256 SCYL3Q8IZE3 742 aa17.93■□□□□ 0.46
ATG4D-207ENST00000587256 RIOK1Q9BRS2 568 aaKnown RBP17.93■□□□□ 0.46
ATG4D-207ENST00000587256 RWDD1Q9H446 243 aaPredicted RBP17.93■□□□□ 0.46
ATG4D-207ENST00000587256 TTC41PQ6P2S7 1318 aa17.93■□□□□ 0.46
ATG4D-207ENST00000587256 PHF20L1A8MW92 1017 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 IRF6O14896 467 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 ERC2O15083 957 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 TBC1D12O60347 775 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 MX1P20591 662 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 ADD2P35612 726 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 IRX6P78412 446 aaPredicted RBP17.92■□□□□ 0.46
ATG4D-207ENST00000587256 SNAPC2Q13487 334 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 SLC4A8Q2Y0W8 1093 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 ZSCAN25Q6NSZ9 544 aa17.92■□□□□ 0.46
ATG4D-207ENST00000587256 CRACR2BQ8N4Y2 399 aaPredicted RBP17.92■□□□□ 0.46
ATG4D-207ENST00000587256 OTUD7AQ8TE49 926 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms