RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 TEX11Q8IYF3 940 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 MAGEB6Q8N7X4 407 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 GCC1Q96CN9 775 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 CSRNP1Q96S65 589 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 HAUS7Q99871 368 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 ZNF341Q9BYN7 854 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 BOLA2Q9H3K6 86 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 DDX4Q9NQI0 724 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 ECHDC1Q9NTX5 307 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 AATFQ9NY61 560 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 CSADQ9Y600 493 aa16.16■□□□□ 0.18
SMARCA4-210ENST00000586892 ATRNL1Q5VV63 1379 aa16.15■□□□□ 0.18
SMARCA4-210ENST00000586892 VGLL4Q14135 290 aa16.15■□□□□ 0.18
SMARCA4-210ENST00000586892 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-210ENST00000586892 EXOC6Q8TAG9 804 aa16.15■□□□□ 0.18
SMARCA4-210ENST00000586892 SH3RF3Q8TEJ3 882 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-210ENST00000586892 WRNIP1Q96S55 665 aa16.15■□□□□ 0.18
SMARCA4-210ENST00000586892 PAG1Q9NWQ8 432 aa16.15■□□□□ 0.18
SMARCA4-210ENST00000586892 SREBF2Q12772 1141 aa16.14■□□□□ 0.17
SMARCA4-210ENST00000586892 SLC9C2Q5TAH2 1124 aa16.14■□□□□ 0.17
SMARCA4-210ENST00000586892 MIGA2Q7L4E1 593 aa16.14■□□□□ 0.17
SMARCA4-210ENST00000586892 SH3BP5LQ7L8J4 393 aa16.14■□□□□ 0.17
SMARCA4-210ENST00000586892 WNK4Q96J92 1243 aa16.14■□□□□ 0.17
SMARCA4-210ENST00000586892 OSBPL5Q9H0X9 879 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-210ENST00000586892 SAGE1Q9NXZ1 904 aa16.14■□□□□ 0.17
SMARCA4-210ENST00000586892 ZBTB47Q9UFB7 747 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-210ENST00000586892 MYH7P12883 1935 aa16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 DDTLA6NHG4 134 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 MANSC4A6NHS7 340 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 HSPA8P11142 646 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 TM4SF4P48230 202 aa16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 INHBEP58166 350 aa16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 MKRN3Q13064 507 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 OPTNQ96CV9 577 aa16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 RWDD1Q9H446 243 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 ELP3Q9H9T3 547 aa16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 PRDM10Q9NQV6 1147 aa16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 ZNF112Q9UJU3 913 aa16.13■□□□□ 0.17
SMARCA4-210ENST00000586892 PDE6AP16499 860 aa16.12■□□□□ 0.17
SMARCA4-210ENST00000586892 MAP3K10Q02779 954 aa16.12■□□□□ 0.17
SMARCA4-210ENST00000586892 MIGA1Q8NAN2 632 aa16.12■□□□□ 0.17
SMARCA4-210ENST00000586892 ZKSCAN4Q969J2 545 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-210ENST00000586892 EDC3Q96F86 508 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-210ENST00000586892 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.12■□□□□ 0.17
SMARCA4-210ENST00000586892 TTC41PQ6P2S7 1318 aa16.12■□□□□ 0.17
SMARCA4-210ENST00000586892 SPDYE5A6NIY4 337 aa16.11■□□□□ 0.17
SMARCA4-210ENST00000586892 LBX1P52954 281 aa16.11■□□□□ 0.17
SMARCA4-210ENST00000586892 DYNLL1P63167 89 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-210ENST00000586892 ANKRD45Q5TZF3 282 aa16.11■□□□□ 0.17
SMARCA4-210ENST00000586892 ERO1BQ86YB8 467 aa16.11■□□□□ 0.17
SMARCA4-210ENST00000586892 TGFBRAP1Q8WUH2 860 aa16.11■□□□□ 0.17
SMARCA4-210ENST00000586892 DHX36Q9H2U1 1008 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-210ENST00000586892 RNF186Q9NXI6 227 aa16.11■□□□□ 0.17
SMARCA4-210ENST00000586892 SNCAIPQ9Y6H5 919 aa16.11■□□□□ 0.17
SMARCA4-210ENST00000586892 FLT1P17948 1338 aa16.11■□□□□ 0.17
SMARCA4-210ENST00000586892 TCRBV5S4A2TA0A5A2 114 aa16.1■□□□□ 0.17
SMARCA4-210ENST00000586892 ERC2O15083 957 aa16.1■□□□□ 0.17
SMARCA4-210ENST00000586892 TBC1D12O60347 775 aa16.1■□□□□ 0.17
SMARCA4-210ENST00000586892 INPP5BP32019 993 aa16.1■□□□□ 0.17
SMARCA4-210ENST00000586892 GJA5P36382 358 aa16.1■□□□□ 0.17
SMARCA4-210ENST00000586892 NOL9Q5SY16 702 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-210ENST00000586892 ZSCAN25Q6NSZ9 544 aa16.1■□□□□ 0.17
SMARCA4-210ENST00000586892 ZNF532Q9HCE3 1301 aa16.1■□□□□ 0.17
SMARCA4-210ENST00000586892 MYH1P12882 1939 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 MAGEB6P1A0A0J9YX57 407 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 PHF20L1A8MW92 1017 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 TRPA1O75762 1119 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 MX1P20591 662 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 ADD2P35612 726 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 TSHZ3Q63HK5 1081 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 MAPKAPK5Q8IW41 473 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 OTUD5Q96G74 571 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 RIOK1Q9BRS2 568 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 PI4KBQ9UBF8 816 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 HERC5Q9UII4 1024 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 TSKSQ9UJT2 592 aa16.09■□□□□ 0.17
SMARCA4-210ENST00000586892 DOCK1Q14185 1865 aa16.08■□□□□ 0.17
SMARCA4-210ENST00000586892 GLRX3O76003 335 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 ALDH1A1P00352 501 aa16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 USP5P45974 858 aa16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 GTF2A2P52657 109 aa16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 PPATQ06203 517 aa16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 PPIL2Q13356 520 aa16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 UBE3CQ15386 1083 aa16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 COL13A1Q5TAT6 717 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 CNKSR2Q8WXI2 1034 aa16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 SIPA1L1O43166 1804 aa16.08■□□□□ 0.16
SMARCA4-210ENST00000586892 TESPA1A2RU30 521 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-210ENST00000586892 CTNND1O60716 968 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-210ENST00000586892 OTUD7BQ6GQQ9 843 aa16.07■□□□□ 0.16
SMARCA4-210ENST00000586892 IFNL1Q8IU54 200 aa16.07■□□□□ 0.16
SMARCA4-210ENST00000586892 SCYL3Q8IZE3 742 aa16.07■□□□□ 0.16
SMARCA4-210ENST00000586892 KBTBD3Q8NAB2 608 aa16.07■□□□□ 0.16
SMARCA4-210ENST00000586892 PI4K2BQ8TCG2 481 aa16.07■□□□□ 0.16
SMARCA4-210ENST00000586892 OTUD7AQ8TE49 926 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-210ENST00000586892 MS4A4AQ96JQ5 239 aa16.07■□□□□ 0.16
SMARCA4-210ENST00000586892 CRNKL1Q9BZJ0 848 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms