RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 SF3A1Q15459 793 aaKnown RBP11.43□□□□□ -0.58
ZNF540-203ENST00000586134 CCDC93Q567U6 631 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 PPP1R42Q7Z4L9 355 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 WDR63Q8IWG1 891 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 N4BP2L2Q92802 583 aaPredicted RBP11.43□□□□□ -0.58
ZNF540-203ENST00000586134 MMTAG2Q9BU76 263 aaKnown RBP11.43□□□□□ -0.58
ZNF540-203ENST00000586134 NUB1Q9Y5A7 615 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 TBC1D8O95759 1140 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 CDC25BP30305 580 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 SCRN1Q12765 414 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 PDIA5Q14554 519 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 NEUROD2Q15784 382 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 SLC10A5Q5PT55 438 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 LRRC31Q6UY01 552 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 RBM46Q8TBY0 533 aaKnown RBP11.43□□□□□ -0.58
ZNF540-203ENST00000586134 PIK3R5Q8WYR1 880 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 UBXN4Q92575 508 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 KCNB2Q92953 911 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 HOMER3Q9NSC5 361 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 UBN2Q6ZU65 1347 aa11.43□□□□□ -0.58
ZNF540-203ENST00000586134 SNED1Q8TER0 1413 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 GLTPD2A6NH11 291 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 APAF1O14727 1248 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 CDKL5O76039 1030 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 NTSR2O95665 410 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 RASSF7Q02833 373 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 TBC1D25Q3MII6 688 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 CABS1Q96KC9 395 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 CRACR2AQ9BSW2 395 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 TAOK3Q9H2K8 898 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 DBF4Q9UBU7 674 aaPredicted RBP11.42□□□□□ -0.58
ZNF540-203ENST00000586134 ABCC12Q96J65 1359 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 SCN4AP35499 1836 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 AP5Z1O43299 807 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 FAM163BP0C2L3 166 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 RLBP1P12271 317 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 EIF2S2P20042 333 aaKnown RBP11.42□□□□□ -0.58
ZNF540-203ENST00000586134 PRELPP51888 382 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 PLCB2Q00722 1185 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 PSMD2Q13200 908 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 KCNV1Q6PIU1 500 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 KIAA1328Q86T90 577 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 RBM12BQ8IXT5 1001 aaKnown RBP11.42□□□□□ -0.58
ZNF540-203ENST00000586134 RTKN2Q8IZC4 609 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 BICD2Q8TD16 824 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
ZNF540-203ENST00000586134 ZBTB3Q9H5J0 574 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 ZCCHC17Q9NP64 241 aaKnown RBP11.42□□□□□ -0.58
ZNF540-203ENST00000586134 PCDHGA4Q9Y5G9 962 aa11.42□□□□□ -0.58
ZNF540-203ENST00000586134 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.42□□□□□ -0.58
ZNF540-203ENST00000586134 HSPA6P17066 643 aa11.41□□□□□ -0.58
ZNF540-203ENST00000586134 CCNHP51946 323 aaPredicted RBP11.41□□□□□ -0.58
ZNF540-203ENST00000586134 WLSQ5T9L3 541 aa11.41□□□□□ -0.58
ZNF540-203ENST00000586134 CCDC24Q8N4L8 307 aa11.41□□□□□ -0.58
ZNF540-203ENST00000586134 MICAL1Q8TDZ2 1067 aa11.41□□□□□ -0.58
ZNF540-203ENST00000586134 CRAMP1Q96RY5 1269 aa11.41□□□□□ -0.58
ZNF540-203ENST00000586134 JPH2Q9BR39 696 aaPredicted RBP11.41□□□□□ -0.58
ZNF540-203ENST00000586134 MBIPQ9NS73 344 aa11.41□□□□□ -0.58
ZNF540-203ENST00000586134 HYPKQ9NX55 129 aa11.41□□□□□ -0.58
ZNF540-203ENST00000586134 FSTL1Q12841 308 aa11.4□□□□□ -0.58
ZNF540-203ENST00000586134 MVPQ14764 893 aaKnown RBP11.4□□□□□ -0.58
ZNF540-203ENST00000586134 PROSER3Q2NL68 480 aa11.4□□□□□ -0.58
ZNF540-203ENST00000586134 HDGFL1Q5TGJ6 251 aa11.4□□□□□ -0.58
ZNF540-203ENST00000586134 SUSD4Q5VX71 490 aa11.4□□□□□ -0.58
ZNF540-203ENST00000586134 CC2D1AQ6P1N0 951 aaPredicted RBP11.4□□□□□ -0.58
ZNF540-203ENST00000586134 CPLX2Q6PUV4 134 aaKnown RBP11.4□□□□□ -0.58
ZNF540-203ENST00000586134 COPS6Q7L5N1 327 aa11.4□□□□□ -0.58
ZNF540-203ENST00000586134 PRPF38AQ8NAV1 312 aaKnown RBP11.4□□□□□ -0.58
ZNF540-203ENST00000586134 KAT2BQ92831 832 aa11.4□□□□□ -0.58
ZNF540-203ENST00000586134 THOC1Q96FV9 657 aaKnown RBP11.4□□□□□ -0.58
ZNF540-203ENST00000586134 ACBD3Q9H3P7 528 aa11.4□□□□□ -0.58
ZNF540-203ENST00000586134 ARFGAP3Q9NP61 516 aa11.4□□□□□ -0.58
ZNF540-203ENST00000586134 ODF2LQ9ULJ1 636 aa11.4□□□□□ -0.58
ZNF540-203ENST00000586134 DDX60Q8IY21 1712 aaKnown RBP11.4□□□□□ -0.58
ZNF540-203ENST00000586134 EFCAB8A8MWE9 144 aa11.4□□□□□ -0.59
ZNF540-203ENST00000586134 CCDC192P0DO97 292 aa11.4□□□□□ -0.59
ZNF540-203ENST00000586134 FKBP4Q02790 459 aaKnown RBP eCLIP11.4□□□□□ -0.59
ZNF540-203ENST00000586134 TCIRG1Q13488 830 aa11.4□□□□□ -0.59
ZNF540-203ENST00000586134 CDC37Q16543 378 aaPredicted RBP11.4□□□□□ -0.59
ZNF540-203ENST00000586134 ERFEQ4G0M1 354 aa11.4□□□□□ -0.59
ZNF540-203ENST00000586134 NCAPG2Q86XI2 1143 aa11.4□□□□□ -0.59
ZNF540-203ENST00000586134 PLBD2Q8NHP8 589 aa11.4□□□□□ -0.59
ZNF540-203ENST00000586134 FAM200AQ8TCP9 573 aa11.4□□□□□ -0.59
ZNF540-203ENST00000586134 XAGE3Q8WTP9 111 aa11.4□□□□□ -0.59
ZNF540-203ENST00000586134 TMX3Q96JJ7 454 aa11.4□□□□□ -0.59
ZNF540-203ENST00000586134 NMRK2Q9NPI5 230 aa11.4□□□□□ -0.59
ZNF540-203ENST00000586134 MCM2P49736 904 aa11.39□□□□□ -0.59
ZNF540-203ENST00000586134 SLC8A3P57103 927 aa11.39□□□□□ -0.59
ZNF540-203ENST00000586134 NUCB1Q02818 461 aa11.39□□□□□ -0.59
ZNF540-203ENST00000586134 LRMPQ12912 555 aa11.39□□□□□ -0.59
ZNF540-203ENST00000586134 TRIM28Q13263 835 aaKnown RBP11.39□□□□□ -0.59
ZNF540-203ENST00000586134 MCM6Q14566 821 aa11.39□□□□□ -0.59
ZNF540-203ENST00000586134 DPY19L2Q6NUT2 758 aa11.39□□□□□ -0.59
ZNF540-203ENST00000586134 CWC27Q6UX04 472 aaKnown RBP11.39□□□□□ -0.59
ZNF540-203ENST00000586134 DDX46Q7L014 1031 aaKnown RBP11.39□□□□□ -0.59
ZNF540-203ENST00000586134 PLA2G4DQ86XP0 818 aa11.39□□□□□ -0.59
ZNF540-203ENST00000586134 DRC7Q8IY82 874 aa11.39□□□□□ -0.59
ZNF540-203ENST00000586134 RANBP17Q9H2T7 1088 aaKnown RBP11.39□□□□□ -0.59
ZNF540-203ENST00000586134 SRGAP3O43295 1099 aa11.38□□□□□ -0.59
ZNF540-203ENST00000586134 UBE2HP62256 183 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms