RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 PICALMQ13492 652 aa14.45□□□□□ -0.1
LIG3-207ENST00000586119 ZSCAN29Q8IWY8 852 aaPredicted RBP14.45□□□□□ -0.1
LIG3-207ENST00000586119 IDI2Q9BXS1 227 aa14.45□□□□□ -0.1
LIG3-207ENST00000586119 PHIPQ8WWQ0 1821 aa14.45□□□□□ -0.1
LIG3-207ENST00000586119 DOCK2Q92608 1830 aa14.45□□□□□ -0.1
LIG3-207ENST00000586119 GAKO14976 1311 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 FAM196BA6NMK8 535 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 CXCL11O14625 94 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 BCRP11274 1271 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 BTDP43251 543 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 FXR1P51114 621 aaKnown RBP eCLIP14.44□□□□□ -0.1
LIG3-207ENST00000586119 PRKCZQ05513 592 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 PI16Q6UXB8 463 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 TBC1D9Q6ZT07 1266 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 SCYL3Q8IZE3 742 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 RAET1EQ8TD07 263 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 XAGE2Q96GT9 111 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 API5Q9BZZ5 524 aaKnown RBP14.44□□□□□ -0.1
LIG3-207ENST00000586119 AFG3L2Q9Y4W6 797 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 PTPRFP10586 1907 aa14.44□□□□□ -0.1
LIG3-207ENST00000586119 MYPNQ86TC9 1320 aa14.43□□□□□ -0.1
LIG3-207ENST00000586119 A0A1B0GUL7 405 aa14.43□□□□□ -0.1
LIG3-207ENST00000586119 SEMA3EO15041 775 aa14.43□□□□□ -0.1
LIG3-207ENST00000586119 ENTPD3O75355 529 aa14.43□□□□□ -0.1
LIG3-207ENST00000586119 GNRH1P01148 92 aa14.43□□□□□ -0.1
LIG3-207ENST00000586119 GRK4P32298 578 aa14.43□□□□□ -0.1
LIG3-207ENST00000586119 RARSP54136 660 aaKnown RBP14.43□□□□□ -0.1
LIG3-207ENST00000586119 PRMT2P55345 433 aa14.43□□□□□ -0.1
LIG3-207ENST00000586119 MAP3K10Q02779 954 aa14.43□□□□□ -0.1
LIG3-207ENST00000586119 GADL1Q6ZQY3 521 aa14.43□□□□□ -0.1
LIG3-207ENST00000586119 DZIP1Q86YF9 867 aaKnown RBP14.43□□□□□ -0.1
LIG3-207ENST00000586119 RFX7Q2KHR2 1363 aa14.43□□□□□ -0.1
LIG3-207ENST00000586119 A0A0G2JLL6 359 aaPredicted RBP14.42□□□□□ -0.1
LIG3-207ENST00000586119 SRGAP3O43295 1099 aa14.42□□□□□ -0.1
LIG3-207ENST00000586119 CCL5P13501 91 aa14.42□□□□□ -0.1
LIG3-207ENST00000586119 RHBDL3P58872 404 aa14.42□□□□□ -0.1
LIG3-207ENST00000586119 MECOMQ03112 1051 aa14.42□□□□□ -0.1
LIG3-207ENST00000586119 PRRT2Q7Z6L0 340 aaPredicted RBP14.42□□□□□ -0.1
LIG3-207ENST00000586119 FAM163AQ96GL9 167 aaPredicted RBP14.42□□□□□ -0.1
LIG3-207ENST00000586119 NEUROD6Q96NK8 337 aa14.42□□□□□ -0.1
LIG3-207ENST00000586119 HOXD10P28358 340 aa14.41□□□□□ -0.1
LIG3-207ENST00000586119 RRP1BQ14684 758 aaKnown RBP14.41□□□□□ -0.1
LIG3-207ENST00000586119 DPF3Q92784 378 aa14.41□□□□□ -0.1
LIG3-207ENST00000586119 PARK7Q99497 189 aaKnown RBP14.41□□□□□ -0.1
LIG3-207ENST00000586119 UNC93B1Q9H1C4 597 aa14.41□□□□□ -0.1
LIG3-207ENST00000586119 PICK1Q9NRD5 415 aa14.41□□□□□ -0.1
LIG3-207ENST00000586119 HMG20BQ9P0W2 317 aa14.41□□□□□ -0.1
LIG3-207ENST00000586119 BIN2Q9UBW5 565 aaPredicted RBP14.41□□□□□ -0.1
LIG3-207ENST00000586119 TRIOBPQ9H2D6 2365 aa14.41□□□□□ -0.1
LIG3-207ENST00000586119 GPR75-ASB3A0A0A6YYF3 556 aa14.4□□□□□ -0.1
LIG3-207ENST00000586119 TRIM75PA6NK02 468 aa14.4□□□□□ -0.1
LIG3-207ENST00000586119 CCER2I3L3R5 266 aa14.4□□□□□ -0.1
LIG3-207ENST00000586119 ELNP15502 786 aa14.4□□□□□ -0.1
LIG3-207ENST00000586119 ERICH6Q7L0X2 663 aa14.4□□□□□ -0.1
LIG3-207ENST00000586119 RNF208Q9H0X6 261 aa14.4□□□□□ -0.1
LIG3-207ENST00000586119 DOCK1Q14185 1865 aa14.4□□□□□ -0.1
LIG3-207ENST00000586119 MROH7-TTC4A0A0A0MT08 1334 aa14.4□□□□□ -0.1
LIG3-207ENST00000586119 PNMA6EA0A0J9YXQ4 647 aa14.39□□□□□ -0.11
LIG3-207ENST00000586119 ZBTB22O15209 634 aa14.39□□□□□ -0.11
LIG3-207ENST00000586119 CTNND1O60716 968 aaKnown RBP14.39□□□□□ -0.11
LIG3-207ENST00000586119 BCAR3O75815 825 aa14.39□□□□□ -0.11
LIG3-207ENST00000586119 GJA8P48165 433 aa14.39□□□□□ -0.11
LIG3-207ENST00000586119 FLT3LGP49771 235 aa14.39□□□□□ -0.11
LIG3-207ENST00000586119 FCGRTP55899 365 aa14.39□□□□□ -0.11
LIG3-207ENST00000586119 TREML2Q5T2D2 321 aa14.39□□□□□ -0.11
LIG3-207ENST00000586119 FASTKD5Q7L8L6 764 aaKnown RBP14.39□□□□□ -0.11
LIG3-207ENST00000586119 ZGPATQ8N5A5 531 aaKnown RBP14.39□□□□□ -0.11
LIG3-207ENST00000586119 MYO5AQ9Y4I1 1855 aaKnown RBP14.38□□□□□ -0.11
LIG3-207ENST00000586119 GJB1P08034 283 aa14.38□□□□□ -0.11
LIG3-207ENST00000586119 CT47B1P0C2W7 299 aaPredicted RBP14.38□□□□□ -0.11
LIG3-207ENST00000586119 SPTY2D1Q68D10 685 aaPredicted RBP14.38□□□□□ -0.11
LIG3-207ENST00000586119 CHRDL2Q6WN34 429 aa14.38□□□□□ -0.11
LIG3-207ENST00000586119 UBE2Q1Q7Z7E8 422 aa14.38□□□□□ -0.11
LIG3-207ENST00000586119 ANKRD13CQ8N6S4 541 aa14.38□□□□□ -0.11
LIG3-207ENST00000586119 CLUAP1Q96AJ1 413 aa14.38□□□□□ -0.11
LIG3-207ENST00000586119 NSUN4Q96CB9 384 aaKnown RBP14.38□□□□□ -0.11
LIG3-207ENST00000586119 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.38□□□□□ -0.11
LIG3-207ENST00000586119 AKAP2Q9Y2D5 859 aa14.38□□□□□ -0.11
LIG3-207ENST00000586119 ADCY3O60266 1144 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 PEX10O60683 326 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 GNAI3P08754 354 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 MCAMP43121 646 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 SPP2Q13103 211 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 MTX1Q13505 466 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 MVPQ14764 893 aaKnown RBP14.37□□□□□ -0.11
LIG3-207ENST00000586119 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 SPATA5Q8NB90 893 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 SNRKQ9NRH2 765 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 RAI14Q9P0K7 980 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 RBM27Q9P2N5 1060 aaKnown RBP14.37□□□□□ -0.11
LIG3-207ENST00000586119 HDAC5Q9UQL6 1122 aa14.37□□□□□ -0.11
LIG3-207ENST00000586119 PDS5AQ29RF7 1337 aaKnown RBP14.37□□□□□ -0.11
LIG3-207ENST00000586119 ATAD5Q96QE3 1844 aa14.36□□□□□ -0.11
LIG3-207ENST00000586119 TRIM27P14373 513 aa14.36□□□□□ -0.11
LIG3-207ENST00000586119 UBXN2AP68543 259 aa14.36□□□□□ -0.11
LIG3-207ENST00000586119 JAG1P78504 1218 aa14.36□□□□□ -0.11
LIG3-207ENST00000586119 SHROOM1Q2M3G4 852 aaPredicted RBP14.36□□□□□ -0.11
LIG3-207ENST00000586119 SH3RF3Q8TEJ3 882 aaPredicted RBP14.36□□□□□ -0.11
LIG3-207ENST00000586119 U2AF1L4Q8WU68 220 aaKnown RBP14.36□□□□□ -0.11
LIG3-207ENST00000586119 ARHGAP45Q92619 1136 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms