RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 ANKRD23Q86SG2 305 aa20.96■□□□□ 0.95
MBD3-204ENST00000585967 TMEM57Q8N5G2 664 aa20.96■□□□□ 0.95
MBD3-204ENST00000585967 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.96■□□□□ 0.95
MBD3-204ENST00000585967 CENPFP49454 3210 aa20.95■□□□□ 0.94
MBD3-204ENST00000585967 PRMT2P55345 433 aa20.95■□□□□ 0.94
MBD3-204ENST00000585967 SLC9C1Q4G0N8 1177 aa20.95■□□□□ 0.94
MBD3-204ENST00000585967 CCDC158Q5M9N0 1113 aa20.95■□□□□ 0.94
MBD3-204ENST00000585967 GPR108Q9NPR9 543 aa20.95■□□□□ 0.94
MBD3-204ENST00000585967 RAI14Q9P0K7 980 aa20.95■□□□□ 0.94
MBD3-204ENST00000585967 KCNH4Q9UQ05 1017 aa20.95■□□□□ 0.94
MBD3-204ENST00000585967 COL2A1P02458 1487 aaPredicted RBP20.94■□□□□ 0.94
MBD3-204ENST00000585967 MYO5AQ9Y4I1 1855 aaKnown RBP20.94■□□□□ 0.94
MBD3-204ENST00000585967 PNMA6EA0A0J9YXQ4 647 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 IGSF3O75054 1194 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 NPM3O75607 178 aaKnown RBP20.94■□□□□ 0.94
MBD3-204ENST00000585967 MECOMQ03112 1051 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 PICALMQ13492 652 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 ITPRIPQ8IWB1 547 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 SCYL3Q8IZE3 742 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 ARMC5Q96C12 935 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 PARK7Q99497 189 aaKnown RBP20.94■□□□□ 0.94
MBD3-204ENST00000585967 TMEM106CQ9BVX2 250 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 HMG20BQ9P0W2 317 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 LRP2BPQ9P2M1 347 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 ZSWIM8A7E2V4 1837 aa20.94■□□□□ 0.94
MBD3-204ENST00000585967 GPR75-ASB3A0A0A6YYF3 556 aa20.93■□□□□ 0.94
MBD3-204ENST00000585967 CXCL11O14625 94 aa20.93■□□□□ 0.94
MBD3-204ENST00000585967 TTC39AQ5SRH9 613 aa20.93■□□□□ 0.94
MBD3-204ENST00000585967 PRPF38BQ5VTL8 546 aaKnown RBP20.93■□□□□ 0.94
MBD3-204ENST00000585967 FASTKD5Q7L8L6 764 aaKnown RBP20.93■□□□□ 0.94
MBD3-204ENST00000585967 PDHXO00330 501 aa20.92■□□□□ 0.94
MBD3-204ENST00000585967 LACTBP83111 547 aaPredicted RBP20.92■□□□□ 0.94
MBD3-204ENST00000585967 ZBED9Q6R2W3 1325 aa20.92■□□□□ 0.94
MBD3-204ENST00000585967 ATRNL1Q5VV63 1379 aa20.92■□□□□ 0.94
MBD3-204ENST00000585967 CTNND1O60716 968 aaKnown RBP20.91■□□□□ 0.94
MBD3-204ENST00000585967 BAG3O95817 575 aa20.91■□□□□ 0.94
MBD3-204ENST00000585967 MS4A1P11836 297 aa20.91■□□□□ 0.94
MBD3-204ENST00000585967 PLCG2P16885 1265 aa20.91■□□□□ 0.94
MBD3-204ENST00000585967 HOXD10P28358 340 aa20.91■□□□□ 0.94
MBD3-204ENST00000585967 SSH3Q8TE77 659 aa20.91■□□□□ 0.94
MBD3-204ENST00000585967 TNNQ9UQP3 1299 aa20.91■□□□□ 0.94
MBD3-204ENST00000585967 SURF6O75683 361 aaKnown RBP20.9■□□□□ 0.94
MBD3-204ENST00000585967 ATP8B2P98198 1209 aa20.9■□□□□ 0.94
MBD3-204ENST00000585967 POLA2Q14181 598 aa20.9■□□□□ 0.94
MBD3-204ENST00000585967 TNNI3KQ59H18 835 aa20.9■□□□□ 0.94
MBD3-204ENST00000585967 MIER1Q8N108 512 aa20.9■□□□□ 0.94
MBD3-204ENST00000585967 NSUN4Q96CB9 384 aaKnown RBP20.9■□□□□ 0.94
MBD3-204ENST00000585967 TBC1D2Q9BYX2 928 aa20.9■□□□□ 0.94
MBD3-204ENST00000585967 FPGT-TNNI3KV9GXZ4 949 aa20.9■□□□□ 0.94
MBD3-204ENST00000585967 MYH1P12882 1939 aa20.9■□□□□ 0.94
MBD3-204ENST00000585967 LOC285556D6RIA3 1793 aa20.9■□□□□ 0.94
MBD3-204ENST00000585967 MCAMP43121 646 aa20.89■□□□□ 0.93
MBD3-204ENST00000585967 ZFPM1Q8IX07 1006 aa20.89■□□□□ 0.93
MBD3-204ENST00000585967 ZHX2Q9Y6X8 837 aa20.89■□□□□ 0.93
MBD3-204ENST00000585967 TBC1D12O60347 775 aa20.88■□□□□ 0.93
MBD3-204ENST00000585967 MAP3K10Q02779 954 aa20.88■□□□□ 0.93
MBD3-204ENST00000585967 NAA16Q6N069 864 aaPredicted RBP20.88■□□□□ 0.93
MBD3-204ENST00000585967 SLC45A1Q9Y2W3 748 aa20.88■□□□□ 0.93
MBD3-204ENST00000585967 PTCH2Q9Y6C5 1203 aa20.88■□□□□ 0.93
MBD3-204ENST00000585967 A0A0G2JLL6 359 aaPredicted RBP20.87■□□□□ 0.93
MBD3-204ENST00000585967 DDTLA6NHG4 134 aaPredicted RBP20.87■□□□□ 0.93
MBD3-204ENST00000585967 PHF20L1A8MW92 1017 aa20.87■□□□□ 0.93
MBD3-204ENST00000585967 PTPRAP18433 802 aa20.87■□□□□ 0.93
MBD3-204ENST00000585967 C17orf99Q6UX52 265 aa20.87■□□□□ 0.93
MBD3-204ENST00000585967 PI16Q6UXB8 463 aa20.87■□□□□ 0.93
MBD3-204ENST00000585967 PRRT2Q7Z6L0 340 aaPredicted RBP20.87■□□□□ 0.93
MBD3-204ENST00000585967 CERS3Q8IU89 383 aa20.87■□□□□ 0.93
MBD3-204ENST00000585967 ERC1Q8IUD2 1116 aa20.87■□□□□ 0.93
MBD3-204ENST00000585967 TEX11Q8IYF3 940 aa20.87■□□□□ 0.93
MBD3-204ENST00000585967 ZNF333Q96JL9 665 aa20.87■□□□□ 0.93
MBD3-204ENST00000585967 OSBPL5Q9H0X9 879 aaPredicted RBP20.87■□□□□ 0.93
MBD3-204ENST00000585967 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.87■□□□□ 0.937e-7■■■□□ 17.9
MBD3-204ENST00000585967 DDX4Q9NQI0 724 aaKnown RBP20.87■□□□□ 0.93
MBD3-204ENST00000585967 RHBDL3P58872 404 aa20.86■□□□□ 0.93
MBD3-204ENST00000585967 SLC4A8Q2Y0W8 1093 aa20.86■□□□□ 0.93
MBD3-204ENST00000585967 GADL1Q6ZQY3 521 aa20.86■□□□□ 0.93
MBD3-204ENST00000585967 TBC1D9Q6ZT07 1266 aa20.86■□□□□ 0.93
MBD3-204ENST00000585967 ZNF512BQ96KM6 892 aaPredicted RBP20.86■□□□□ 0.93
MBD3-204ENST00000585967 DHX36Q9H2U1 1008 aaKnown RBP20.86■□□□□ 0.93
MBD3-204ENST00000585967 CPA4Q9UI42 421 aa20.86■□□□□ 0.93
MBD3-204ENST00000585967 HERC5Q9UII4 1024 aaKnown RBP20.86■□□□□ 0.93
MBD3-204ENST00000585967 PNMA3Q9UL41 463 aa20.86■□□□□ 0.93
MBD3-204ENST00000585967 FMNL1O95466 1100 aaPredicted RBP20.85■□□□□ 0.93
MBD3-204ENST00000585967 PSMC4P43686 418 aa20.85■□□□□ 0.93
MBD3-204ENST00000585967 FCGRTP55899 365 aa20.85■□□□□ 0.93
MBD3-204ENST00000585967 SH3BP5LQ7L8J4 393 aa20.85■□□□□ 0.93
MBD3-204ENST00000585967 SMCR8Q8TEV9 937 aaPredicted RBP20.85■□□□□ 0.93
MBD3-204ENST00000585967 TRIM34Q9BYJ4 488 aa20.85■□□□□ 0.93
MBD3-204ENST00000585967 C1orf115Q9H7X2 142 aa20.85■□□□□ 0.93
MBD3-204ENST00000585967 NOP58Q9Y2X3 529 aaKnown RBP20.85■□□□□ 0.93
MBD3-204ENST00000585967 ADGRA2Q96PE1 1338 aa20.84■□□□□ 0.93
MBD3-204ENST00000585967 SIPA1L1O43166 1804 aa20.84■□□□□ 0.93
MBD3-204ENST00000585967 PABPC4Q13310 644 aaKnown RBP eCLIP20.84■□□□□ 0.935e-7■■■□□ 16.3
MBD3-204ENST00000585967 HSP90AB4PQ58FF6 505 aa20.84■□□□□ 0.93
MBD3-204ENST00000585967 TMED8Q6PL24 325 aaPredicted RBP20.84■□□□□ 0.93
MBD3-204ENST00000585967 RAET1EQ8TD07 263 aa20.84■□□□□ 0.93
MBD3-204ENST00000585967 GCC1Q96CN9 775 aa20.84■□□□□ 0.93
MBD3-204ENST00000585967 DBNDD2Q9BQY9 259 aa20.84■□□□□ 0.93
MBD3-204ENST00000585967 AFG3L2Q9Y4W6 797 aa20.84■□□□□ 0.93
MBD3-204ENST00000585967 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms