RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SLF2Q8IX21 1173 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 SH3RF3Q8TEJ3 882 aaPredicted RBP15.14■□□□□ 0.01
VMP1-202ENST00000585847 ZC3H15Q8WU90 426 aaKnown RBP15.14■□□□□ 0.01
VMP1-202ENST00000585847 APPBP2Q92624 585 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 IL17RAQ96F46 866 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 FAM227BQ96M60 508 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 IL25Q9H293 177 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 DDX4Q9NQI0 724 aaKnown RBP15.14■□□□□ 0.01
VMP1-202ENST00000585847 HELLSQ9NRZ9 838 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 USP40Q9NVE5 1235 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 WBP1LQ9NX94 342 aa15.14■□□□□ 0.01
VMP1-202ENST00000585847 A0A0D9SFI3 127 aa15.13■□□□□ 0.01
VMP1-202ENST00000585847 NMIQ13287 307 aaPredicted RBP15.13■□□□□ 0.01
VMP1-202ENST00000585847 BECN1Q14457 450 aa15.13■□□□□ 0.01
VMP1-202ENST00000585847 DDX60LQ5H9U9 1706 aaKnown RBP15.13■□□□□ 0.01
VMP1-202ENST00000585847 LCORLQ8N3X6 602 aa15.13■□□□□ 0.01
VMP1-202ENST00000585847 BEGAINQ9BUH8 593 aa15.13■□□□□ 0.01
VMP1-202ENST00000585847 FAM198AQ9UFP1 575 aa15.13■□□□□ 0.01
VMP1-202ENST00000585847 PITPNM2Q9BZ72 1349 aa15.13■□□□□ 0.01
VMP1-202ENST00000585847 WDR33Q9C0J8 1336 aaKnown RBP15.13■□□□□ 0.01
VMP1-202ENST00000585847 FMR1Q06787 632 aaKnown RBP eCLIP15.12■□□□□ 0.01
VMP1-202ENST00000585847 GRM1Q13255 1194 aa15.12■□□□□ 0.01
VMP1-202ENST00000585847 ZFPM1Q8IX07 1006 aa15.12■□□□□ 0.01
VMP1-202ENST00000585847 IDI2Q9BXS1 227 aa15.12■□□□□ 0.01
VMP1-202ENST00000585847 ARMT1Q9H993 441 aa15.12■□□□□ 0.01
VMP1-202ENST00000585847 SIPA1L1O43166 1804 aa15.12■□□□□ 0.01
VMP1-202ENST00000585847 MYH1P12882 1939 aa15.11■□□□□ 0.01
VMP1-202ENST00000585847 BAZ2AQ9UIF9 1905 aaKnown RBP15.11■□□□□ 0.01
VMP1-202ENST00000585847 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
VMP1-202ENST00000585847 ADM5C9JUS6 153 aa15.11■□□□□ 0.01
VMP1-202ENST00000585847 FOXP2O15409 715 aa15.11■□□□□ 0.01
VMP1-202ENST00000585847 MBD4O95243 580 aa15.11■□□□□ 0.01
VMP1-202ENST00000585847 CCDC129Q6ZRS4 1044 aa15.11■□□□□ 0.01
VMP1-202ENST00000585847 CERS3Q8IU89 383 aa15.11■□□□□ 0.01
VMP1-202ENST00000585847 CDAN1Q8IWY9 1227 aa15.11■□□□□ 0.01
VMP1-202ENST00000585847 STRBPQ96SI9 672 aaKnown RBP15.11■□□□□ 0.01
VMP1-202ENST00000585847 USP26Q9BXU7 913 aa15.11■□□□□ 0.01
VMP1-202ENST00000585847 ANO2Q9NQ90 1003 aa15.11■□□□□ 0.01
VMP1-202ENST00000585847 TCP10L2B9ZVM9 353 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 PRKAB2O43741 272 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 SEC24BO95487 1268 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 ECE1P42892 770 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 RABEP1Q15276 862 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 MCMDC2Q4G0Z9 681 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 RNF20Q5VTR2 975 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 FKBP1CQ5VVH2 108 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 SH3BP5LQ7L8J4 393 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 ZNF589Q86UQ0 364 aaPredicted RBP15.1■□□□□ 0.01
VMP1-202ENST00000585847 TEPSINQ96N21 525 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 GLIS2Q9BZE0 524 aaPredicted RBP15.1■□□□□ 0.01
VMP1-202ENST00000585847 VEZTQ9HBM0 779 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 NAV1Q8NEY1 1877 aa15.1■□□□□ 0.01
VMP1-202ENST00000585847 TRAF5O00463 557 aa15.09■□□□□ 0.01
VMP1-202ENST00000585847 GPAA1O43292 621 aa15.09■□□□□ 0.01
VMP1-202ENST00000585847 MYO1BO43795 1136 aa15.09■□□□□ 0.01
VMP1-202ENST00000585847 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
VMP1-202ENST00000585847 BAG3O95817 575 aa15.09■□□□□ 0.01
VMP1-202ENST00000585847 HSPA8P11142 646 aaKnown RBP15.09■□□□□ 0.01
VMP1-202ENST00000585847 PRAMEF18Q5VWM3 479 aa15.09■□□□□ 0.01
VMP1-202ENST00000585847 USP48Q86UV5 1035 aa15.09■□□□□ 0.01
VMP1-202ENST00000585847 APOBEC3FQ8IUX4 373 aaKnown RBP15.09■□□□□ 0.01
VMP1-202ENST00000585847 TEX11Q8IYF3 940 aa15.09■□□□□ 0.01
VMP1-202ENST00000585847 SSC5DA1L4H1 1573 aa15.09■□□□□ 0.01
VMP1-202ENST00000585847 TRPM7Q96QT4 1865 aa15.09■□□□□ 0.01
VMP1-202ENST00000585847 RASA3Q14644 834 aa15.08■□□□□ 0
VMP1-202ENST00000585847 CWC27Q6UX04 472 aaKnown RBP15.08■□□□□ 0
VMP1-202ENST00000585847 KRT26Q7Z3Y9 468 aa15.08■□□□□ 0
VMP1-202ENST00000585847 FAM83AQ86UY5 434 aa15.08■□□□□ 0
VMP1-202ENST00000585847 TGFBRAP1Q8WUH2 860 aa15.08■□□□□ 0
VMP1-202ENST00000585847 SDR42E1Q8WUS8 393 aa15.08■□□□□ 0
VMP1-202ENST00000585847 DCPSQ96C86 337 aaKnown RBP15.08■□□□□ 0
VMP1-202ENST00000585847 ABHD8Q96I13 439 aa15.08■□□□□ 0
VMP1-202ENST00000585847 CAPNS2Q96L46 248 aa15.08■□□□□ 0
VMP1-202ENST00000585847 IPO9Q96P70 1041 aaKnown RBP15.08■□□□□ 0
VMP1-202ENST00000585847 TMEM39BQ9GZU3 492 aa15.08■□□□□ 0
VMP1-202ENST00000585847 DEFB129Q9H1M3 183 aa15.08■□□□□ 0
VMP1-202ENST00000585847 EPB41L4AQ9HCS5 686 aaPredicted RBP15.08■□□□□ 0
VMP1-202ENST00000585847 FLT1P17948 1338 aa15.08■□□□□ 0
VMP1-202ENST00000585847 CCDC171Q6TFL3 1326 aa15.08■□□□□ 0
VMP1-202ENST00000585847 RPAP1Q9BWH6 1393 aaPredicted RBP15.08■□□□□ 0
VMP1-202ENST00000585847 GSG1L2A8MUP6 293 aa15.07■□□□□ 0
VMP1-202ENST00000585847 ENTPD3O75355 529 aa15.07■□□□□ 0
VMP1-202ENST00000585847 SLURP2P0DP57 97 aa15.07■□□□□ 0
VMP1-202ENST00000585847 PLCG2P16885 1265 aa15.07■□□□□ 0
VMP1-202ENST00000585847 ZKSCAN1P17029 563 aaPredicted RBP15.07■□□□□ 0
VMP1-202ENST00000585847 EVX2Q03828 476 aa15.07■□□□□ 0
VMP1-202ENST00000585847 TCP10Q12799 353 aa15.07■□□□□ 0
VMP1-202ENST00000585847 PICALMQ13492 652 aa15.07■□□□□ 0
VMP1-202ENST00000585847 VPS53Q5VIR6 699 aa15.07■□□□□ 0
VMP1-202ENST00000585847 CDC37L1Q7L3B6 337 aa15.07■□□□□ 0
VMP1-202ENST00000585847 MAPKAPK5Q8IW41 473 aa15.07■□□□□ 0
VMP1-202ENST00000585847 FAM151AQ8WW52 585 aa15.07■□□□□ 0
VMP1-202ENST00000585847 NOL10Q9BSC4 688 aaKnown RBP15.07■□□□□ 0
VMP1-202ENST00000585847 DSCC1Q9BVC3 393 aa15.07■□□□□ 0
VMP1-202ENST00000585847 OSBPL5Q9H0X9 879 aaPredicted RBP15.07■□□□□ 0
VMP1-202ENST00000585847 DAXXQ9UER7 740 aaPredicted RBP15.07■□□□□ 0
VMP1-202ENST00000585847 ATRNL1Q5VV63 1379 aa15.07■□□□□ 0
VMP1-202ENST00000585847 COL2A1P02458 1487 aaPredicted RBP15.07■□□□□ 0
VMP1-202ENST00000585847 DDTLA6NHG4 134 aaPredicted RBP15.06■□□□□ 0
VMP1-202ENST00000585847 SMIM22K7EJ46 135 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms