RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 RILPL2Q969X0 211 aa25.9■■□□□ 1.74
RETREG3-202ENST00000585726 EVI5LQ96CN4 794 aa25.9■■□□□ 1.74
RETREG3-202ENST00000585726 RIOK1Q9BRS2 568 aaKnown RBP25.9■■□□□ 1.74
RETREG3-202ENST00000585726 OSBPL3Q9H4L5 887 aa25.9■■□□□ 1.74
RETREG3-202ENST00000585726 RNF113AO15541 343 aaKnown RBP25.89■■□□□ 1.74
RETREG3-202ENST00000585726 MIGA2Q7L4E1 593 aa25.89■■□□□ 1.74
RETREG3-202ENST00000585726 ARMT1Q9H993 441 aa25.89■■□□□ 1.74
RETREG3-202ENST00000585726 DDTLA6NHG4 134 aaPredicted RBP25.88■■□□□ 1.73
RETREG3-202ENST00000585726 RASSF10A6NK89 507 aa25.88■■□□□ 1.73
RETREG3-202ENST00000585726 MBD4O95243 580 aa25.88■■□□□ 1.73
RETREG3-202ENST00000585726 LRRFIP1Q32MZ4 808 aaKnown RBP25.88■■□□□ 1.73
RETREG3-202ENST00000585726 SH3BP5LQ7L8J4 393 aa25.88■■□□□ 1.73
RETREG3-202ENST00000585726 CERS3Q8IU89 383 aa25.88■■□□□ 1.73
RETREG3-202ENST00000585726 LCORLQ8N3X6 602 aa25.88■■□□□ 1.73
RETREG3-202ENST00000585726 CSRNP1Q96S65 589 aa25.88■■□□□ 1.73
RETREG3-202ENST00000585726 OSBPL5Q9H0X9 879 aaPredicted RBP25.88■■□□□ 1.73
RETREG3-202ENST00000585726 PAPPA2Q9BXP8 1791 aa25.87■■□□□ 1.73
RETREG3-202ENST00000585726 RPAP1Q9BWH6 1393 aaPredicted RBP25.87■■□□□ 1.73
RETREG3-202ENST00000585726 USP2O75604 605 aaPredicted RBP25.87■■□□□ 1.73
RETREG3-202ENST00000585726 ZFYP08048 801 aaPredicted RBP25.87■■□□□ 1.73
RETREG3-202ENST00000585726 CYP4F22Q6NT55 531 aa25.87■■□□□ 1.73
RETREG3-202ENST00000585726 PUS7LQ9H0K6 701 aaKnown RBP25.87■■□□□ 1.73
RETREG3-202ENST00000585726 SAP30BPQ9UHR5 308 aaKnown RBP25.87■■□□□ 1.73
RETREG3-202ENST00000585726 FLT1P17948 1338 aa25.87■■□□□ 1.73
RETREG3-202ENST00000585726 DNAJC5GQ8N7S2 189 aa25.86■■□□□ 1.73
RETREG3-202ENST00000585726 AIDAQ96BJ3 306 aa25.86■■□□□ 1.73
RETREG3-202ENST00000585726 HOOK2Q96ED9 719 aa25.86■■□□□ 1.73
RETREG3-202ENST00000585726 CRNKL1Q9BZJ0 848 aaKnown RBP25.86■■□□□ 1.73
RETREG3-202ENST00000585726 NPM3O75607 178 aaKnown RBP25.85■■□□□ 1.73
RETREG3-202ENST00000585726 IREB2P48200 963 aaKnown RBP25.85■■□□□ 1.73
RETREG3-202ENST00000585726 ZNF157P51786 506 aaPredicted RBP25.85■■□□□ 1.73
RETREG3-202ENST00000585726 SLC4A8Q2Y0W8 1093 aa25.85■■□□□ 1.73
RETREG3-202ENST00000585726 ERICH6BQ5W0A0 696 aa25.85■■□□□ 1.73
RETREG3-202ENST00000585726 SKAP1Q86WV1 359 aa25.85■■□□□ 1.73
RETREG3-202ENST00000585726 APPBP2Q92624 585 aa25.85■■□□□ 1.73
RETREG3-202ENST00000585726 PPP4R2Q9NY27 417 aa25.85■■□□□ 1.73
RETREG3-202ENST00000585726 VEGFBP49765 207 aa25.84■■□□□ 1.73
RETREG3-202ENST00000585726 DCAF15Q66K64 600 aa25.84■■□□□ 1.73
RETREG3-202ENST00000585726 RGMBQ6NW40 437 aa25.84■■□□□ 1.73
RETREG3-202ENST00000585726 SDR42E1Q8WUS8 393 aa25.84■■□□□ 1.73
RETREG3-202ENST00000585726 OSBP2Q969R2 916 aa25.84■■□□□ 1.73
RETREG3-202ENST00000585726 KLRG1Q96E93 195 aa25.84■■□□□ 1.73
RETREG3-202ENST00000585726 MYH7P12883 1935 aa25.83■■□□□ 1.73
RETREG3-202ENST00000585726 AK9Q5TCS8 1911 aa25.83■■□□□ 1.73
RETREG3-202ENST00000585726 PRKAB2O43741 272 aa25.83■■□□□ 1.73
RETREG3-202ENST00000585726 SLURP2P0DP57 97 aa25.83■■□□□ 1.73
RETREG3-202ENST00000585726 HHIPL1Q96JK4 782 aa25.83■■□□□ 1.73
RETREG3-202ENST00000585726 CAPNS2Q96L46 248 aa25.83■■□□□ 1.73
RETREG3-202ENST00000585726 SEC62Q99442 399 aaKnown RBP25.83■■□□□ 1.73
RETREG3-202ENST00000585726 PALD1Q9ULE6 856 aa25.83■■□□□ 1.73
RETREG3-202ENST00000585726 M0R2C6 588 aa25.82■■□□□ 1.72
RETREG3-202ENST00000585726 MAP3K11Q16584 847 aa25.82■■□□□ 1.72
RETREG3-202ENST00000585726 TTC22Q5TAA0 569 aa25.82■■□□□ 1.72
RETREG3-202ENST00000585726 ZNF341Q9BYN7 854 aa25.82■■□□□ 1.72
RETREG3-202ENST00000585726 WDR33Q9C0J8 1336 aaKnown RBP25.82■■□□□ 1.72
RETREG3-202ENST00000585726 ECE1P42892 770 aa25.81■■□□□ 1.72
RETREG3-202ENST00000585726 LDLRAD1Q5T700 205 aa25.81■■□□□ 1.72
RETREG3-202ENST00000585726 CLMNQ96JQ2 1002 aa25.81■■□□□ 1.72
RETREG3-202ENST00000585726 SLC4A4Q9Y6R1 1079 aa25.81■■□□□ 1.72
RETREG3-202ENST00000585726 FAM196BA6NMK8 535 aa25.8■■□□□ 1.72
RETREG3-202ENST00000585726 ANKRD13AQ8IZ07 590 aa25.8■■□□□ 1.72
RETREG3-202ENST00000585726 WRNIP1Q96S55 665 aa25.8■■□□□ 1.72
RETREG3-202ENST00000585726 DHX36Q9H2U1 1008 aaKnown RBP25.8■■□□□ 1.72
RETREG3-202ENST00000585726 ATRNL1Q5VV63 1379 aa25.8■■□□□ 1.72
RETREG3-202ENST00000585726 GSPT1P15170 499 aaKnown RBP25.79■■□□□ 1.72
RETREG3-202ENST00000585726 MAP3K9P80192 1104 aa25.79■■□□□ 1.72
RETREG3-202ENST00000585726 ZMYM1Q5SVZ6 1142 aa25.79■■□□□ 1.72
RETREG3-202ENST00000585726 SLC10A4Q96EP9 437 aa25.79■■□□□ 1.72
RETREG3-202ENST00000585726 STRBPQ96SI9 672 aaKnown RBP25.79■■□□□ 1.72
RETREG3-202ENST00000585726 GPAA1O43292 621 aa25.78■■□□□ 1.72
RETREG3-202ENST00000585726 AOC2O75106 756 aa25.78■■□□□ 1.72
RETREG3-202ENST00000585726 POLR3DP05423 398 aaPredicted RBP25.78■■□□□ 1.72
RETREG3-202ENST00000585726 HLA-DOAP06340 250 aa25.78■■□□□ 1.72
RETREG3-202ENST00000585726 MKRN3Q13064 507 aaKnown RBP25.78■■□□□ 1.72
RETREG3-202ENST00000585726 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.78■■□□□ 1.72
RETREG3-202ENST00000585726 ZKSCAN4Q969J2 545 aaPredicted RBP25.78■■□□□ 1.72
RETREG3-202ENST00000585726 CCDC102AQ96A19 550 aa25.78■■□□□ 1.72
RETREG3-202ENST00000585726 ELP3Q9H9T3 547 aa25.78■■□□□ 1.72
RETREG3-202ENST00000585726 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.78■■□□□ 1.72
RETREG3-202ENST00000585726 DCP1AQ9NPI6 582 aaPredicted RBP25.78■■□□□ 1.72
RETREG3-202ENST00000585726 MCM9Q9NXL9 1143 aa25.78■■□□□ 1.72
RETREG3-202ENST00000585726 PI4KBQ9UBF8 816 aa25.78■■□□□ 1.72
RETREG3-202ENST00000585726 CDK5RAP2Q96SN8 1893 aa25.78■■□□□ 1.72
RETREG3-202ENST00000585726 COL2A1P02458 1487 aaPredicted RBP25.78■■□□□ 1.72
RETREG3-202ENST00000585726 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.77■■□□□ 1.72
RETREG3-202ENST00000585726 RASAL3Q86YV0 1011 aa25.77■■□□□ 1.72
RETREG3-202ENST00000585726 CRACR2BQ8N4Y2 399 aaPredicted RBP25.77■■□□□ 1.72
RETREG3-202ENST00000585726 FAM227BQ96M60 508 aa25.77■■□□□ 1.72
RETREG3-202ENST00000585726 CSADQ9Y600 493 aa25.77■■□□□ 1.72
RETREG3-202ENST00000585726 SDSP20132 328 aa25.76■■□□□ 1.71
RETREG3-202ENST00000585726 INPP5BP32019 993 aa25.76■■□□□ 1.71
RETREG3-202ENST00000585726 VGLL4Q14135 290 aa25.76■■□□□ 1.71
RETREG3-202ENST00000585726 CCDC129Q6ZRS4 1044 aa25.76■■□□□ 1.71
RETREG3-202ENST00000585726 TRIM34Q9BYJ4 488 aa25.76■■□□□ 1.71
RETREG3-202ENST00000585726 FOCADQ5VW36 1801 aa25.76■■□□□ 1.71
RETREG3-202ENST00000585726 FAM155AB1AL88 458 aaPredicted RBP25.75■■□□□ 1.71
RETREG3-202ENST00000585726 APPP05067 770 aa25.75■■□□□ 1.71
RETREG3-202ENST00000585726 SLC10A3P09131 477 aa25.75■■□□□ 1.71
RETREG3-202ENST00000585726 NMIQ13287 307 aaPredicted RBP25.75■■□□□ 1.71
RETREG3-202ENST00000585726 DDRGK1Q96HY6 314 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms