RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 TREML2Q5T2D2 321 aa14.44□□□□□ -0.1
NUP85-224ENST00000583948 MAFAQ8NHW3 353 aaPredicted RBP14.44□□□□□ -0.1
NUP85-224ENST00000583948 ZDHHC15Q96MV8 337 aa14.44□□□□□ -0.1
NUP85-224ENST00000583948 FAM198AQ9UFP1 575 aa14.44□□□□□ -0.1
NUP85-224ENST00000583948 PHIPQ8WWQ0 1821 aa14.43□□□□□ -0.1
NUP85-224ENST00000583948 A0A0G2JLL6 359 aaPredicted RBP14.43□□□□□ -0.1
NUP85-224ENST00000583948 FLIIQ13045 1269 aa14.43□□□□□ -0.1
NUP85-224ENST00000583948 FKBP5Q13451 457 aaPredicted RBP14.43□□□□□ -0.1
NUP85-224ENST00000583948 LRRC24Q50LG9 513 aa14.43□□□□□ -0.1
NUP85-224ENST00000583948 CDC42EP5Q6NZY7 148 aa14.43□□□□□ -0.1
NUP85-224ENST00000583948 PRRT2Q7Z6L0 340 aaPredicted RBP14.43□□□□□ -0.1
NUP85-224ENST00000583948 FBXO33Q7Z6M2 555 aa14.43□□□□□ -0.1
NUP85-224ENST00000583948 DNAAF4Q8WXU2 420 aa14.43□□□□□ -0.1
NUP85-224ENST00000583948 TMOD2Q9NZR1 351 aa14.43□□□□□ -0.1
NUP85-224ENST00000583948 GTF3C3Q9Y5Q9 886 aa14.43□□□□□ -0.1
NUP85-224ENST00000583948 ZNF521Q96K83 1311 aa14.42□□□□□ -0.1
NUP85-224ENST00000583948 TRIM75PA6NK02 468 aa14.42□□□□□ -0.1
NUP85-224ENST00000583948 PHF20L1A8MW92 1017 aa14.42□□□□□ -0.1
NUP85-224ENST00000583948 FRAT2O75474 233 aaPredicted RBP14.42□□□□□ -0.1
NUP85-224ENST00000583948 CCDC57Q2TAC2 916 aa14.42□□□□□ -0.1
NUP85-224ENST00000583948 SMCR8Q8TEV9 937 aaPredicted RBP14.42□□□□□ -0.1
NUP85-224ENST00000583948 FAM151AQ8WW52 585 aa14.42□□□□□ -0.1
NUP85-224ENST00000583948 TRIB2Q92519 343 aa14.42□□□□□ -0.1
NUP85-224ENST00000583948 STK31Q9BXU1 1019 aa14.42□□□□□ -0.1
NUP85-224ENST00000583948 PTPRAP18433 802 aa14.41□□□□□ -0.1
NUP85-224ENST00000583948 UBE4AQ14139 1066 aa14.41□□□□□ -0.1
NUP85-224ENST00000583948 NOL9Q5SY16 702 aaKnown RBP14.41□□□□□ -0.1
NUP85-224ENST00000583948 WWC1Q8IX03 1113 aa14.41□□□□□ -0.1
NUP85-224ENST00000583948 LINS1Q8NG48 757 aa14.41□□□□□ -0.1
NUP85-224ENST00000583948 MYH16Q9H6N6 1097 aa14.41□□□□□ -0.1
NUP85-224ENST00000583948 HMX1Q9NP08 348 aaPredicted RBP14.41□□□□□ -0.1
NUP85-224ENST00000583948 GJD2Q9UKL4 321 aa14.41□□□□□ -0.1
NUP85-224ENST00000583948 AFG3L2Q9Y4W6 797 aa14.41□□□□□ -0.1
NUP85-224ENST00000583948 FAM196BA6NMK8 535 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 CXCL11O14625 94 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 CYP2B6P20813 491 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 TWISTNBQ3B726 338 aaPredicted RBP14.4□□□□□ -0.1
NUP85-224ENST00000583948 SH3BP5LQ7L8J4 393 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 VPS37DQ86XT2 251 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 USP38Q8NB14 1042 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 KLHDC4Q8TBB5 520 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 COA7Q96BR5 231 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 TTYH1Q9H313 450 aaPredicted RBP14.4□□□□□ -0.1
NUP85-224ENST00000583948 SEMA6BQ9H3T3 888 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 OGDHLQ9ULD0 1010 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 DAGLAQ9Y4D2 1042 aa14.4□□□□□ -0.1
NUP85-224ENST00000583948 COL2A1P02458 1487 aaPredicted RBP14.39□□□□□ -0.11
NUP85-224ENST00000583948 HMGCRP04035 888 aa14.39□□□□□ -0.11
NUP85-224ENST00000583948 NEFLP07196 543 aa14.39□□□□□ -0.11
NUP85-224ENST00000583948 CCND3P30281 292 aaPredicted RBP14.39□□□□□ -0.11
NUP85-224ENST00000583948 HDLBPQ00341 1268 aaKnown RBP14.39□□□□□ -0.11
NUP85-224ENST00000583948 CCDC27Q2M243 656 aa14.39□□□□□ -0.11
NUP85-224ENST00000583948 C9orf50Q5SZB4 431 aa14.39□□□□□ -0.11
NUP85-224ENST00000583948 ZNF697Q5TEC3 545 aa14.39□□□□□ -0.11
NUP85-224ENST00000583948 ANKLE1Q8NAG6 615 aa14.39□□□□□ -0.11
NUP85-224ENST00000583948 KAZALD1Q96I82 304 aa14.39□□□□□ -0.11
NUP85-224ENST00000583948 SUCLG2Q96I99 432 aa14.39□□□□□ -0.11
NUP85-224ENST00000583948 SUPT16HQ9Y5B9 1047 aaKnown RBP14.39□□□□□ -0.11
NUP85-224ENST00000583948 ATRNL1Q5VV63 1379 aa14.38□□□□□ -0.11
NUP85-224ENST00000583948 RPAP1Q9BWH6 1393 aaPredicted RBP14.38□□□□□ -0.11
NUP85-224ENST00000583948 E9PSI1 815 aa14.38□□□□□ -0.11
NUP85-224ENST00000583948 COL6A1P12109 1028 aa14.38□□□□□ -0.11
NUP85-224ENST00000583948 ATN1P54259 1190 aaPredicted RBP14.38□□□□□ -0.11
NUP85-224ENST00000583948 SHHQ15465 462 aa14.38□□□□□ -0.11
NUP85-224ENST00000583948 CCL14Q16627 93 aa14.38□□□□□ -0.11
NUP85-224ENST00000583948 NCBP3Q53F19 620 aaKnown RBP14.38□□□□□ -0.11
NUP85-224ENST00000583948 BEND3Q5T5X7 828 aa14.38□□□□□ -0.11
NUP85-224ENST00000583948 FKBP1CQ5VVH2 108 aa14.38□□□□□ -0.11
NUP85-224ENST00000583948 FAM109BQ6ICB4 259 aaPredicted RBP14.38□□□□□ -0.11
NUP85-224ENST00000583948 SCYL3Q8IZE3 742 aa14.38□□□□□ -0.11
NUP85-224ENST00000583948 USP40Q9NVE5 1235 aa14.38□□□□□ -0.11
NUP85-224ENST00000583948 DOCK2Q92608 1830 aa14.37□□□□□ -0.11
NUP85-224ENST00000583948 PRKAR2AP13861 404 aaKnown RBP14.37□□□□□ -0.11
NUP85-224ENST00000583948 PRDX5P30044 214 aa14.37□□□□□ -0.11
NUP85-224ENST00000583948 SLFN5Q08AF3 891 aa14.37□□□□□ -0.11
NUP85-224ENST00000583948 FASTKD5Q7L8L6 764 aaKnown RBP14.37□□□□□ -0.11
NUP85-224ENST00000583948 WDR63Q8IWG1 891 aa14.37□□□□□ -0.11
NUP85-224ENST00000583948 HOOK2Q96ED9 719 aa14.37□□□□□ -0.11
NUP85-224ENST00000583948 DDTLA6NHG4 134 aaPredicted RBP14.36□□□□□ -0.11
NUP85-224ENST00000583948 LHX8Q68G74 356 aa14.36□□□□□ -0.11
NUP85-224ENST00000583948 HHIPL2Q6UWX4 724 aa14.36□□□□□ -0.11
NUP85-224ENST00000583948 PICK1Q9NRD5 415 aa14.36□□□□□ -0.11
NUP85-224ENST00000583948 DOCK1Q14185 1865 aa14.35□□□□□ -0.11
NUP85-224ENST00000583948 RGS3P49796 1198 aa14.35□□□□□ -0.11
NUP85-224ENST00000583948 CACNB2Q08289 660 aaPredicted RBP14.35□□□□□ -0.11
NUP85-224ENST00000583948 METTL24Q5JXM2 366 aa14.35□□□□□ -0.11
NUP85-224ENST00000583948 TBC1D22AQ8WUA7 517 aa14.35□□□□□ -0.11
NUP85-224ENST00000583948 SENP6Q9GZR1 1112 aaPredicted RBP14.35□□□□□ -0.11
NUP85-224ENST00000583948 DDX4Q9NQI0 724 aaKnown RBP14.35□□□□□ -0.11
NUP85-224ENST00000583948 AGTPBP1Q9UPW5 1226 aa14.35□□□□□ -0.11
NUP85-224ENST00000583948 MYH13Q9UKX3 1938 aa14.35□□□□□ -0.11
NUP85-224ENST00000583948 LTBP2Q14767 1821 aa14.34□□□□□ -0.11
NUP85-224ENST00000583948 GRM8O00222 908 aa14.34□□□□□ -0.11
NUP85-224ENST00000583948 RRP1BQ14684 758 aaKnown RBP14.34□□□□□ -0.11
NUP85-224ENST00000583948 MAP3K21Q5TCX8 1036 aa14.34□□□□□ -0.11
NUP85-224ENST00000583948 VGLL2Q8N8G2 317 aa14.34□□□□□ -0.11
NUP85-224ENST00000583948 FRMPD3Q5JV73 1810 aa14.34□□□□□ -0.11
NUP85-224ENST00000583948 MAST2Q6P0Q8 1798 aa14.33□□□□□ -0.12
NUP85-224ENST00000583948 TMEM265A0A087WTH1 108 aa14.33□□□□□ -0.12
NUP85-224ENST00000583948 FOSL2P15408 326 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms