RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 TDO2P48775 406 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 ZNF280AP59817 542 aaPredicted RBP10.94□□□□□ -0.66
CASC3-209ENST00000583902 TNFAIP1Q13829 316 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 ANKRD1Q15327 319 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 KIAA0825Q8IV33 1275 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 LCORLQ8N3X6 602 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 FBXL16Q8N461 479 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 SNX21Q969T3 373 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 KRT23Q9C075 422 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 IL25Q9H293 177 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 ARMT1Q9H993 441 aa10.94□□□□□ -0.66
CASC3-209ENST00000583902 H7C1D1 291 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 ENTPD3O75355 529 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 RAD17O75943 681 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 RHBDL3P58872 404 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 DLGAP5Q15398 846 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 DIXDC1Q155Q3 683 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 CCDC178Q5BJE1 867 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 PPP4R3BQ5MIZ7 849 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 APOBEC3HQ6NTF7 200 aaKnown RBP10.93□□□□□ -0.66
CASC3-209ENST00000583902 CCDC129Q6ZRS4 1044 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 ADGRA1Q86SQ6 560 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 TTC6Q86TZ1 520 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 TEX11Q8IYF3 940 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 MIGA1Q8NAN2 632 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 DCP1AQ9NPI6 582 aaPredicted RBP10.93□□□□□ -0.66
CASC3-209ENST00000583902 MKRN1Q9UHC7 482 aaKnown RBP10.93□□□□□ -0.66
CASC3-209ENST00000583902 JAG2Q9Y219 1238 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 CYP46A1Q9Y6A2 500 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 MYH1P12882 1939 aa10.93□□□□□ -0.66
CASC3-209ENST00000583902 COL4A5P29400 1685 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 NAV1Q8NEY1 1877 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 CYP21A2P08686 494 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 FGRP09769 529 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 YBX3P16989 372 aaKnown RBP eCLIP10.92□□□□□ -0.66
CASC3-209ENST00000583902 RBM5P52756 815 aaKnown RBP eCLIP10.92□□□□□ -0.662e-6■■■■□ 23
CASC3-209ENST00000583902 RASSF7Q02833 373 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 PDE4BQ07343 736 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 CFAP100Q494V2 611 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 VPS53Q5VIR6 699 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 BLOC1S2Q6QNY1 142 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 NCOA7Q8NI08 942 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 STAG1Q8WVM7 1258 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 ZSWIM6Q9HCJ5 1215 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 KCNQ5Q9NR82 932 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 SNX14Q9Y5W7 946 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 LAMB1P07942 1786 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 TIAM2Q8IVF5 1701 aa10.92□□□□□ -0.66
CASC3-209ENST00000583902 ROBO3Q96MS0 1386 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 HLA-DOAP06340 250 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 LMOD1P29536 600 aaPredicted RBP10.91□□□□□ -0.66
CASC3-209ENST00000583902 TNNI2P48788 182 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 PPARAQ07869 468 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 AKNAD1Q5T1N1 836 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 MFSD6Q6ZSS7 791 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 RUFY3Q7L099 469 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 RALYLQ86SE5 291 aaKnown RBP10.91□□□□□ -0.66
CASC3-209ENST00000583902 FAM83AQ86UY5 434 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 TMTC2Q8N394 836 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 HOOK2Q96ED9 719 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 ZBED3Q96IU2 234 aaPredicted RBP10.91□□□□□ -0.66
CASC3-209ENST00000583902 L3MBTL3Q96JM7 780 aaPredicted RBP10.91□□□□□ -0.66
CASC3-209ENST00000583902 NEK1Q96PY6 1258 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 EHD4Q9H223 541 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 USP40Q9NVE5 1235 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 RNF181Q9P0P0 153 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 BAZ2AQ9UIF9 1905 aaKnown RBP10.91□□□□□ -0.66
CASC3-209ENST00000583902 SCN4AP35499 1836 aa10.91□□□□□ -0.66
CASC3-209ENST00000583902 FLT1P17948 1338 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 F8W031 263 aaPredicted RBP10.9□□□□□ -0.66
CASC3-209ENST00000583902 FOXP2O15409 715 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 ORC4O43929 436 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 CHGBP05060 677 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 MCM5P33992 734 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 DYNLL1P63167 89 aaKnown RBP10.9□□□□□ -0.66
CASC3-209ENST00000583902 SART3Q15020 963 aaKnown RBP10.9□□□□□ -0.66
CASC3-209ENST00000583902 GRIK5Q16478 980 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 C12orf60Q5U649 245 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 C9orf131Q5VYM1 1079 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 CDC42EP5Q6NZY7 148 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 CTR9Q6PD62 1173 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 DHX32Q7L7V1 743 aaKnown RBP10.9□□□□□ -0.66
CASC3-209ENST00000583902 HSCBQ8IWL3 235 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 SH3RF3Q8TEJ3 882 aaPredicted RBP10.9□□□□□ -0.66
CASC3-209ENST00000583902 KIF2CQ99661 725 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 MYOZ2Q9NPC6 264 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 MCM9Q9NXL9 1143 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
CASC3-209ENST00000583902 SWAP70Q9UH65 585 aa10.9□□□□□ -0.66
CASC3-209ENST00000583902 CNOT7Q9UIV1 285 aaKnown RBP10.9□□□□□ -0.66
CASC3-209ENST00000583902 ATRNL1Q5VV63 1379 aa10.9□□□□□ -0.67
CASC3-209ENST00000583902 IQCA1LA6NCM1 817 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 USP17L12C9JPN9 530 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 USP17L21D6R901 530 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 E7EWF7 191 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 WDHD1O75717 1129 aaPredicted RBP10.89□□□□□ -0.67
CASC3-209ENST00000583902 POLR3DP05423 398 aaPredicted RBP10.89□□□□□ -0.67
CASC3-209ENST00000583902 PDIA4P13667 645 aaKnown RBP10.89□□□□□ -0.67
CASC3-209ENST00000583902 SCNN1DP51172 638 aa10.89□□□□□ -0.67
CASC3-209ENST00000583902 SLFNL1Q499Z3 407 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms