RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 DOCK2Q92608 1830 aa30.42■■■□□ 2.46
TSEN54-209ENST00000583454 NFIAQ12857 509 aa30.41■■■□□ 2.46
TSEN54-209ENST00000583454 TTC39AQ5SRH9 613 aa30.41■■■□□ 2.46
TSEN54-209ENST00000583454 FAM43AQ8N2R8 423 aa30.41■■■□□ 2.46
TSEN54-209ENST00000583454 ZGPATQ8N5A5 531 aaKnown RBP30.41■■■□□ 2.46
TSEN54-209ENST00000583454 FAM151AQ8WW52 585 aa30.41■■■□□ 2.46
TSEN54-209ENST00000583454 ERO1AQ96HE7 468 aa30.41■■■□□ 2.46
TSEN54-209ENST00000583454 LRRCC1Q9C099 1032 aa30.4■■■□□ 2.46
TSEN54-209ENST00000583454 LDHBP07195 334 aaKnown RBP30.39■■■□□ 2.46
TSEN54-209ENST00000583454 SP3Q02447 781 aa30.39■■■□□ 2.46
TSEN54-209ENST00000583454 PI16Q6UXB8 463 aa30.39■■■□□ 2.46
TSEN54-209ENST00000583454 ERO1BQ86YB8 467 aa30.39■■■□□ 2.46
TSEN54-209ENST00000583454 FAM198AQ9UFP1 575 aa30.39■■■□□ 2.46
TSEN54-209ENST00000583454 KIAA0100Q14667 2235 aaKnown RBP30.39■■■□□ 2.46
TSEN54-209ENST00000583454 HDAC1Q13547 482 aaPredicted RBP30.38■■■□□ 2.45
TSEN54-209ENST00000583454 HOOK2Q96ED9 719 aa30.38■■■□□ 2.45
TSEN54-209ENST00000583454 PTPN22Q9Y2R2 807 aa30.38■■■□□ 2.45
TSEN54-209ENST00000583454 RFX7Q2KHR2 1363 aa30.38■■■□□ 2.45
TSEN54-209ENST00000583454 IRF6O14896 467 aa30.37■■■□□ 2.45
TSEN54-209ENST00000583454 DCAF15Q66K64 600 aa30.37■■■□□ 2.45
TSEN54-209ENST00000583454 SPTY2D1Q68D10 685 aaPredicted RBP30.37■■■□□ 2.45
TSEN54-209ENST00000583454 MIGA2Q7L4E1 593 aa30.37■■■□□ 2.45
TSEN54-209ENST00000583454 ZNF112Q9UJU3 913 aa30.37■■■□□ 2.45
TSEN54-209ENST00000583454 IFIT2P09913 472 aaKnown RBP30.36■■■□□ 2.45
TSEN54-209ENST00000583454 INPP5BP32019 993 aa30.36■■■□□ 2.45
TSEN54-209ENST00000583454 TCP10Q12799 353 aa30.36■■■□□ 2.45
TSEN54-209ENST00000583454 PPIL2Q13356 520 aa30.36■■■□□ 2.45
TSEN54-209ENST00000583454 TAF1CQ15572 869 aaPredicted RBP30.36■■■□□ 2.45
TSEN54-209ENST00000583454 ZNF341Q9BYN7 854 aa30.36■■■□□ 2.45
TSEN54-209ENST00000583454 ABCF2Q9UG63 623 aa30.36■■■□□ 2.45
TSEN54-209ENST00000583454 ATRNL1Q5VV63 1379 aa30.36■■■□□ 2.45
TSEN54-209ENST00000583454 SNRKQ9NRH2 765 aa30.35■■■□□ 2.45
TSEN54-209ENST00000583454 GAKO14976 1311 aa30.35■■■□□ 2.45
TSEN54-209ENST00000583454 SMARCA5O60264 1052 aaPredicted RBP30.34■■■□□ 2.45
TSEN54-209ENST00000583454 ZFPM1Q8IX07 1006 aa30.34■■■□□ 2.45
TSEN54-209ENST00000583454 EFCC1Q9HA90 598 aa30.34■■■□□ 2.45
TSEN54-209ENST00000583454 ZFYVE28Q9HCC9 887 aa30.34■■■□□ 2.45
TSEN54-209ENST00000583454 BTBD19C9JJ37 291 aa30.33■■■□□ 2.45
TSEN54-209ENST00000583454 SLC34A2O95436 690 aa30.33■■■□□ 2.45
TSEN54-209ENST00000583454 CETPP11597 493 aa30.33■■■□□ 2.45
TSEN54-209ENST00000583454 TBC1D9Q6ZT07 1266 aa30.33■■■□□ 2.45
TSEN54-209ENST00000583454 USP40Q9NVE5 1235 aa30.33■■■□□ 2.45
TSEN54-209ENST00000583454 PPATQ06203 517 aa30.32■■■□□ 2.44
TSEN54-209ENST00000583454 ERICH6Q7L0X2 663 aa30.32■■■□□ 2.44
TSEN54-209ENST00000583454 ZCCHC17Q9NP64 241 aaKnown RBP30.32■■■□□ 2.44
TSEN54-209ENST00000583454 CYP2E1P05181 493 aaPredicted RBP30.31■■■□□ 2.44
TSEN54-209ENST00000583454 SNAPC2Q13487 334 aa30.31■■■□□ 2.44
TSEN54-209ENST00000583454 ARMC5Q96C12 935 aa30.31■■■□□ 2.44
TSEN54-209ENST00000583454 PTPRFP10586 1907 aa30.3■■■□□ 2.44
TSEN54-209ENST00000583454 ZAP70P43403 619 aa30.3■■■□□ 2.44
TSEN54-209ENST00000583454 IRX6P78412 446 aaPredicted RBP30.3■■■□□ 2.44
TSEN54-209ENST00000583454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP30.3■■■□□ 2.44
TSEN54-209ENST00000583454 FAM163AQ96GL9 167 aaPredicted RBP30.3■■■□□ 2.44
TSEN54-209ENST00000583454 IDI2Q9BXS1 227 aa30.3■■■□□ 2.44
TSEN54-209ENST00000583454 PHIPQ8WWQ0 1821 aa30.29■■■□□ 2.44
TSEN54-209ENST00000583454 POTEFA5A3E0 1075 aa30.29■■■□□ 2.44
TSEN54-209ENST00000583454 MECOMQ03112 1051 aa30.29■■■□□ 2.44
TSEN54-209ENST00000583454 NOL9Q5SY16 702 aaKnown RBP30.29■■■□□ 2.44
TSEN54-209ENST00000583454 DZIP1Q86YF9 867 aaKnown RBP30.29■■■□□ 2.44
TSEN54-209ENST00000583454 ZNF384Q8TF68 577 aa30.29■■■□□ 2.44
TSEN54-209ENST00000583454 BCL11AQ9H165 835 aa30.29■■■□□ 2.44
TSEN54-209ENST00000583454 TLR2O60603 784 aa30.28■■■□□ 2.44
TSEN54-209ENST00000583454 RGS3P49796 1198 aa30.28■■■□□ 2.44
TSEN54-209ENST00000583454 MOGSQ13724 837 aa30.28■■■□□ 2.44
TSEN54-209ENST00000583454 SH3BP5LQ7L8J4 393 aa30.28■■■□□ 2.44
TSEN54-209ENST00000583454 NSUN4Q96CB9 384 aaKnown RBP30.28■■■□□ 2.44
TSEN54-209ENST00000583454 GCC1Q96CN9 775 aa30.28■■■□□ 2.44
TSEN54-209ENST00000583454 RWDD1Q9H446 243 aaPredicted RBP30.28■■■□□ 2.44
TSEN54-209ENST00000583454 KCNH4Q9UQ05 1017 aa30.28■■■□□ 2.44
TSEN54-209ENST00000583454 IGSF3O75054 1194 aa30.27■■■□□ 2.44
TSEN54-209ENST00000583454 SLF2Q8IX21 1173 aa30.27■■■□□ 2.44
TSEN54-209ENST00000583454 LRP2BPQ9P2M1 347 aa30.27■■■□□ 2.44
TSEN54-209ENST00000583454 DOCK1Q14185 1865 aa30.27■■■□□ 2.44
TSEN54-209ENST00000583454 MYO5AQ9Y4I1 1855 aaKnown RBP30.27■■■□□ 2.44
TSEN54-209ENST00000583454 WDHD1O75717 1129 aaPredicted RBP30.26■■■□□ 2.43
TSEN54-209ENST00000583454 ATP5JP18859 108 aa30.26■■■□□ 2.43
TSEN54-209ENST00000583454 PIH1D3Q9NQM4 214 aaKnown RBP30.26■■■□□ 2.43
TSEN54-209ENST00000583454 RAI14Q9P0K7 980 aa30.26■■■□□ 2.43
TSEN54-209ENST00000583454 PHF20L1A8MW92 1017 aa30.25■■■□□ 2.43
TSEN54-209ENST00000583454 ENTPD3O75355 529 aa30.25■■■□□ 2.43
TSEN54-209ENST00000583454 PRPF38BQ5VTL8 546 aaKnown RBP30.25■■■□□ 2.43
TSEN54-209ENST00000583454 ARHGAP39Q9C0H5 1083 aa30.25■■■□□ 2.43
TSEN54-209ENST00000583454 DDX4Q9NQI0 724 aaKnown RBP30.25■■■□□ 2.43
TSEN54-209ENST00000583454 ADGRA2Q96PE1 1338 aa30.24■■■□□ 2.43
TSEN54-209ENST00000583454 GSTO1P78417 241 aa30.24■■■□□ 2.43
TSEN54-209ENST00000583454 PTCH2Q9Y6C5 1203 aa30.24■■■□□ 2.43
TSEN54-209ENST00000583454 NDUFB9Q9Y6M9 179 aa30.24■■■□□ 2.43
TSEN54-209ENST00000583454 MROH7-TTC4A0A0A0MT08 1334 aa30.23■■■□□ 2.43
TSEN54-209ENST00000583454 IGHDP01880 384 aa30.23■■■□□ 2.43
TSEN54-209ENST00000583454 SLURP2P0DP57 97 aa30.23■■■□□ 2.43
TSEN54-209ENST00000583454 MAP3K10Q02779 954 aa30.23■■■□□ 2.43
TSEN54-209ENST00000583454 ANKRD23Q86SG2 305 aa30.23■■■□□ 2.43
TSEN54-209ENST00000583454 LDHCP07864 332 aa30.22■■■□□ 2.43
TSEN54-209ENST00000583454 BTDP43251 543 aa30.22■■■□□ 2.43
TSEN54-209ENST00000583454 RHBDL3P58872 404 aa30.22■■■□□ 2.43
TSEN54-209ENST00000583454 LACTBP83111 547 aaPredicted RBP30.22■■■□□ 2.43
TSEN54-209ENST00000583454 C17orf99Q6UX52 265 aa30.22■■■□□ 2.43
TSEN54-209ENST00000583454 SMC5Q8IY18 1101 aa30.22■■■□□ 2.43
TSEN54-209ENST00000583454 ANTXR1Q9H6X2 564 aa30.22■■■□□ 2.43
TSEN54-209ENST00000583454 GPR75-ASB3A0A0A6YYF3 556 aa30.21■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms