RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 COL2A1P02458 1487 aaPredicted RBP16.3■□□□□ 0.2
ITGB4-209ENST00000583327 CNTNAP1P78357 1384 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 PITPNM2Q9BZ72 1349 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 USP17L12C9JPN9 530 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 USP17L21D6R901 530 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 MYO1BO43795 1136 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 APPP05067 770 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 CYP21A2P08686 494 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 EPHX2P34913 555 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 USP5P45974 858 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 C12orf60Q5U649 245 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 ZFPM1Q8IX07 1006 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 ZC3H15Q8WU90 426 aaKnown RBP16.3■□□□□ 0.2
ITGB4-209ENST00000583327 FAM151AQ8WW52 585 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 OSBPL5Q9H0X9 879 aaPredicted RBP16.3■□□□□ 0.2
ITGB4-209ENST00000583327 CDK5RAP2Q96SN8 1893 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 ECM29Q5VYK3 1845 aa16.3■□□□□ 0.2
ITGB4-209ENST00000583327 ATRNL1Q5VV63 1379 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 ASTN2O75129 1339 aaPredicted RBP16.29■□□□□ 0.2
ITGB4-209ENST00000583327 DDX60LQ5H9U9 1706 aaKnown RBP16.29■□□□□ 0.2
ITGB4-209ENST00000583327 CLRN2A0PK11 232 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 SLC27A2O14975 620 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 FGRP09769 529 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 CACNB3P54284 484 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 CREB3L3Q68CJ9 461 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 SH3BP5LQ7L8J4 393 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 METTL16Q86W50 562 aaKnown RBP16.29■□□□□ 0.2
ITGB4-209ENST00000583327 MAPKAPK5Q8IW41 473 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 RASEFQ8IZ41 740 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 TBC1D32Q96NH3 1257 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 C22orf23Q9BZE7 217 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 NBPF3Q9H094 633 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 NAPBQ9H115 298 aa16.29■□□□□ 0.2
ITGB4-209ENST00000583327 VEGFAP15692 232 aaPredicted RBP16.28■□□□□ 0.2
ITGB4-209ENST00000583327 ANAPC15P60006 121 aa16.28■□□□□ 0.2
ITGB4-209ENST00000583327 KIF2CQ99661 725 aa16.28■□□□□ 0.2
ITGB4-209ENST00000583327 DHX36Q9H2U1 1008 aaKnown RBP16.28■□□□□ 0.2
ITGB4-209ENST00000583327 ARPP21Q9UBL0 812 aaPredicted RBP16.28■□□□□ 0.2
ITGB4-209ENST00000583327 TAOK2Q9UL54 1235 aa16.28■□□□□ 0.2
ITGB4-209ENST00000583327 PALD1Q9ULE6 856 aa16.28■□□□□ 0.2
ITGB4-209ENST00000583327 SMIM22K7EJ46 135 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 ZNF213O14771 459 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 TDO2P48775 406 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 PLCD1P51178 756 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 MAP3K10Q02779 954 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 GABPAQ06546 454 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 PNMA8AQ86V59 439 aaPredicted RBP16.27■□□□□ 0.2
ITGB4-209ENST00000583327 TEPSINQ96N21 525 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 MCM9Q9NXL9 1143 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 TMOD2Q9NZR1 351 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 SNX14Q9Y5W7 946 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 TACC3Q9Y6A5 838 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 TAF6LQ9Y6J9 622 aa16.27■□□□□ 0.2
ITGB4-209ENST00000583327 CYP2D7A0A087X1C5 515 aa16.26■□□□□ 0.19
ITGB4-209ENST00000583327 DDTLA6NHG4 134 aaPredicted RBP16.26■□□□□ 0.19
ITGB4-209ENST00000583327 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
ITGB4-209ENST00000583327 CYP2D6P10635 497 aa16.26■□□□□ 0.19
ITGB4-209ENST00000583327 EVX2Q03828 476 aa16.26■□□□□ 0.19
ITGB4-209ENST00000583327 PPARAQ07869 468 aa16.26■□□□□ 0.19
ITGB4-209ENST00000583327 PICALMQ13492 652 aa16.26■□□□□ 0.19
ITGB4-209ENST00000583327 IMMTQ16891 758 aaKnown RBP16.26■□□□□ 0.19
ITGB4-209ENST00000583327 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
ITGB4-209ENST00000583327 DDRGK1Q96HY6 314 aa16.26■□□□□ 0.19
ITGB4-209ENST00000583327 UPF2Q9HAU5 1272 aaKnown RBP16.26■□□□□ 0.19
ITGB4-209ENST00000583327 RRAGCQ9HB90 399 aa16.26■□□□□ 0.19
ITGB4-209ENST00000583327 ROBO3Q96MS0 1386 aa16.26■□□□□ 0.19
ITGB4-209ENST00000583327 TCP10Q12799 353 aa16.25■□□□□ 0.19
ITGB4-209ENST00000583327 TNFAIP1Q13829 316 aa16.25■□□□□ 0.19
ITGB4-209ENST00000583327 RASA3Q14644 834 aa16.25■□□□□ 0.19
ITGB4-209ENST00000583327 RNF20Q5VTR2 975 aa16.25■□□□□ 0.19
ITGB4-209ENST00000583327 TTC6Q86TZ1 520 aa16.25■□□□□ 0.19
ITGB4-209ENST00000583327 APOBEC3FQ8IUX4 373 aaKnown RBP16.25■□□□□ 0.19
ITGB4-209ENST00000583327 FOXP4Q8IVH2 680 aaPredicted RBP16.25■□□□□ 0.19
ITGB4-209ENST00000583327 EHD4Q9H223 541 aa16.25■□□□□ 0.19
ITGB4-209ENST00000583327 SAP30BPQ9UHR5 308 aaKnown RBP16.25■□□□□ 0.19
ITGB4-209ENST00000583327 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
ITGB4-209ENST00000583327 PCP11498 1178 aaKnown RBP16.24■□□□□ 0.19
ITGB4-209ENST00000583327 MCCP23508 829 aa16.24■□□□□ 0.19
ITGB4-209ENST00000583327 TNNI2P48788 182 aa16.24■□□□□ 0.19
ITGB4-209ENST00000583327 STOX1Q6ZVD7 989 aa16.24■□□□□ 0.19
ITGB4-209ENST00000583327 TBC1D10CQ8IV04 446 aa16.24■□□□□ 0.19
ITGB4-209ENST00000583327 STAG1Q8WVM7 1258 aa16.24■□□□□ 0.19
ITGB4-209ENST00000583327 DEFB129Q9H1M3 183 aa16.24■□□□□ 0.19
ITGB4-209ENST00000583327 VEZTQ9HBM0 779 aa16.24■□□□□ 0.19
ITGB4-209ENST00000583327 GGA3Q9NZ52 723 aa16.24■□□□□ 0.19
ITGB4-209ENST00000583327 PI4KBQ9UBF8 816 aa16.24■□□□□ 0.19
ITGB4-209ENST00000583327 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.24■□□□□ 0.19
ITGB4-209ENST00000583327 PPP2R3BQ9Y5P8 575 aa16.24■□□□□ 0.19
ITGB4-209ENST00000583327 MINDY4BA8MYZ0 360 aa16.23■□□□□ 0.19
ITGB4-209ENST00000583327 E7EWF7 191 aa16.23■□□□□ 0.19
ITGB4-209ENST00000583327 TBC1D12O60347 775 aa16.23■□□□□ 0.19
ITGB4-209ENST00000583327 HAND2P61296 217 aa16.23■□□□□ 0.19
ITGB4-209ENST00000583327 AKNAD1Q5T1N1 836 aa16.23■□□□□ 0.19
ITGB4-209ENST00000583327 C16orf86Q6ZW13 317 aa16.23■□□□□ 0.19
ITGB4-209ENST00000583327 TM6SF1Q9BZW5 370 aa16.23■□□□□ 0.19
ITGB4-209ENST00000583327 TMEM39BQ9GZU3 492 aa16.23■□□□□ 0.19
ITGB4-209ENST00000583327 NMRK2Q9NPI5 230 aa16.23■□□□□ 0.19
ITGB4-209ENST00000583327 NAV1Q8NEY1 1877 aa16.22■□□□□ 0.19
ITGB4-209ENST00000583327 LAMA4Q16363 1823 aa16.22■□□□□ 0.19
ITGB4-209ENST00000583327 BAZ2AQ9UIF9 1905 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms