RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 PRKAB2O43741 272 aa26.49■■□□□ 1.83
CCDC47-204ENST00000582252 UFL1O94874 794 aa26.49■■□□□ 1.83
CCDC47-204ENST00000582252 LIFRP42702 1097 aa26.49■■□□□ 1.83
CCDC47-204ENST00000582252 SPTY2D1Q68D10 685 aaPredicted RBP26.49■■□□□ 1.83
CCDC47-204ENST00000582252 C15orf52Q6ZUT6 534 aaKnown RBP26.49■■□□□ 1.83
CCDC47-204ENST00000582252 SLC51AQ86UW1 340 aa26.49■■□□□ 1.83
CCDC47-204ENST00000582252 HPS5Q9UPZ3 1129 aa26.49■■□□□ 1.83
CCDC47-204ENST00000582252 IRS2Q9Y4H2 1338 aa26.49■■□□□ 1.83
CCDC47-204ENST00000582252 GOLGA6L4A6NEF3 574 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 TGFB2P61812 414 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 CTDSPL2Q05D32 466 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 GIMAP6Q6P9H5 292 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 TTC6Q86TZ1 520 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 SGMS1Q86VZ5 419 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 KLRK1P26718 216 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 METAP2P50579 478 aaKnown RBP eCLIP26.48■■□□□ 1.83
CCDC47-204ENST00000582252 TMEM67Q5HYA8 995 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 NFXL1Q6ZNB6 911 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 TSPY26PQ9H489 355 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 ANAPC4Q9UJX5 808 aa26.48■■□□□ 1.83
CCDC47-204ENST00000582252 BRCA1P38398 1863 aaKnown RBP26.47■■□□□ 1.83
CCDC47-204ENST00000582252 SYNE3Q6ZMZ3 975 aa26.47■■□□□ 1.83
CCDC47-204ENST00000582252 ZNF396Q96N95 335 aaPredicted RBP26.47■■□□□ 1.83
CCDC47-204ENST00000582252 RIOK1Q9BRS2 568 aaKnown RBP26.47■■□□□ 1.83
CCDC47-204ENST00000582252 ERICH2A1L162 156 aa26.46■■□□□ 1.83
CCDC47-204ENST00000582252 PPARAQ07869 468 aa26.46■■□□□ 1.83
CCDC47-204ENST00000582252 ADGRA1Q86SQ6 560 aa26.46■■□□□ 1.83
CCDC47-204ENST00000582252 TBC1D16Q8TBP0 767 aa26.46■■□□□ 1.83
CCDC47-204ENST00000582252 IGDCC4Q8TDY8 1250 aa26.46■■□□□ 1.83
CCDC47-204ENST00000582252 ORC3Q9UBD5 711 aaPredicted RBP26.46■■□□□ 1.83
CCDC47-204ENST00000582252 DUOX1Q9NRD9 1551 aa26.46■■□□□ 1.83
CCDC47-204ENST00000582252 CCDC69A6NI79 296 aa26.45■■□□□ 1.83
CCDC47-204ENST00000582252 IFIT3O14879 490 aaKnown RBP26.45■■□□□ 1.83
CCDC47-204ENST00000582252 ZBTB43O43298 467 aa26.45■■□□□ 1.83
CCDC47-204ENST00000582252 KDM4AO75164 1064 aa26.45■■□□□ 1.83
CCDC47-204ENST00000582252 PCP11498 1178 aaKnown RBP26.45■■□□□ 1.83
CCDC47-204ENST00000582252 PTGER2P43116 358 aa26.45■■□□□ 1.83
CCDC47-204ENST00000582252 APOA5Q6Q788 366 aa26.45■■□□□ 1.83
CCDC47-204ENST00000582252 TMTC2Q8N394 836 aa26.45■■□□□ 1.83
CCDC47-204ENST00000582252 MPNDQ8N594 471 aa26.45■■□□□ 1.83
CCDC47-204ENST00000582252 LEO1Q8WVC0 666 aaPredicted RBP26.45■■□□□ 1.83
CCDC47-204ENST00000582252 NSUN4Q96CB9 384 aaKnown RBP26.45■■□□□ 1.83
CCDC47-204ENST00000582252 DPEP1P16444 411 aa26.45■■□□□ 1.82
CCDC47-204ENST00000582252 CCDC173Q0VFZ6 552 aa26.45■■□□□ 1.82
CCDC47-204ENST00000582252 CC2D2BQ6DHV5 1058 aa26.45■■□□□ 1.82
CCDC47-204ENST00000582252 FAM173BQ6P4H8 233 aa26.45■■□□□ 1.82
CCDC47-204ENST00000582252 TTLL6Q8N841 843 aa26.45■■□□□ 1.82
CCDC47-204ENST00000582252 C8orf76Q96K31 380 aa26.45■■□□□ 1.82
CCDC47-204ENST00000582252 LY9Q9HBG7 655 aa26.45■■□□□ 1.82
CCDC47-204ENST00000582252 ZSWIM5Q9P217 1185 aa26.45■■□□□ 1.82
CCDC47-204ENST00000582252 FDPSP14324 419 aaKnown RBP26.44■■□□□ 1.82
CCDC47-204ENST00000582252 CHAF1AQ13111 956 aaPredicted RBP26.44■■□□□ 1.82
CCDC47-204ENST00000582252 DPP8Q6V1X1 898 aaPredicted RBP26.44■■□□□ 1.82
CCDC47-204ENST00000582252 ZNF804AQ7Z570 1209 aa26.44■■□□□ 1.82
CCDC47-204ENST00000582252 WDR66Q8TBY9 1149 aa26.44■■□□□ 1.82
CCDC47-204ENST00000582252 TOMM22Q9NS69 142 aa26.44■■□□□ 1.82
CCDC47-204ENST00000582252 POLLQ9UGP5 575 aa26.44■■□□□ 1.82
CCDC47-204ENST00000582252 C6orf229H3BNL8 230 aa26.43■■□□□ 1.82
CCDC47-204ENST00000582252 TXNRD3Q86VQ6 643 aa26.43■■□□□ 1.82
CCDC47-204ENST00000582252 RBSNQ9H1K0 784 aa26.43■■□□□ 1.82
CCDC47-204ENST00000582252 CD2APQ9Y5K6 639 aa26.43■■□□□ 1.82
CCDC47-204ENST00000582252 MECOMQ03112 1051 aa26.42■■□□□ 1.82
CCDC47-204ENST00000582252 C7orf43Q8WVR3 580 aa26.42■■□□□ 1.82
CCDC47-204ENST00000582252 CRNKL1Q9BZJ0 848 aaKnown RBP26.42■■□□□ 1.82
CCDC47-204ENST00000582252 TFIP11Q9UBB9 837 aaKnown RBP26.42■■□□□ 1.82
CCDC47-204ENST00000582252 SLC12A7Q9Y666 1083 aa26.42■■□□□ 1.82
CCDC47-204ENST00000582252 NID2Q14112 1375 aa26.42■■□□□ 1.82
CCDC47-204ENST00000582252 KCNA3P22001 575 aa26.42■■□□□ 1.82
CCDC47-204ENST00000582252 RRP12Q5JTH9 1297 aaKnown RBP26.42■■□□□ 1.82
CCDC47-204ENST00000582252 SDR42E1Q8WUS8 393 aa26.42■■□□□ 1.82
CCDC47-204ENST00000582252 ESR2Q92731 530 aa26.42■■□□□ 1.82
CCDC47-204ENST00000582252 SPON1Q9HCB6 807 aa26.42■■□□□ 1.82
CCDC47-204ENST00000582252 GOLGA8AA7E2F4 631 aa26.41■■□□□ 1.82
CCDC47-204ENST00000582252 MINDY4BA8MYZ0 360 aa26.41■■□□□ 1.82
CCDC47-204ENST00000582252 FOSBP53539 338 aa26.41■■□□□ 1.82
CCDC47-204ENST00000582252 RCAN1P53805 252 aa26.41■■□□□ 1.82
CCDC47-204ENST00000582252 WTAPQ15007 396 aa26.41■■□□□ 1.82
CCDC47-204ENST00000582252 OLFM4Q6UX06 510 aa26.41■■□□□ 1.82
CCDC47-204ENST00000582252 LAMB1P07942 1786 aa26.41■■□□□ 1.82
CCDC47-204ENST00000582252 GRIPAP1Q4V328 841 aa26.4■■□□□ 1.82
CCDC47-204ENST00000582252 DZIP1Q86YF9 867 aaKnown RBP26.4■■□□□ 1.82
CCDC47-204ENST00000582252 DYNLL1P63167 89 aaKnown RBP26.39■■□□□ 1.82
CCDC47-204ENST00000582252 BRAPQ7Z569 592 aa26.39■■□□□ 1.82
CCDC47-204ENST00000582252 MICU3Q86XE3 530 aa26.39■■□□□ 1.82
CCDC47-204ENST00000582252 FBXO18Q8NFZ0 1043 aa26.39■■□□□ 1.82
CCDC47-204ENST00000582252 GPR101Q96P66 508 aaPredicted RBP26.39■■□□□ 1.82
CCDC47-204ENST00000582252 GSTO1P78417 241 aa26.39■■□□□ 1.81
CCDC47-204ENST00000582252 TPRNQ4KMQ1 711 aa26.39■■□□□ 1.81
CCDC47-204ENST00000582252 TDRD7Q8NHU6 1098 aaKnown RBP26.39■■□□□ 1.81
CCDC47-204ENST00000582252 EYA3Q99504 573 aa26.39■■□□□ 1.81
CCDC47-204ENST00000582252 UBAC1Q9BSL1 405 aa26.39■■□□□ 1.81
CCDC47-204ENST00000582252 ATP8A2Q9NTI2 1148 aa26.39■■□□□ 1.81
CCDC47-204ENST00000582252 PIM2Q9P1W9 311 aa26.39■■□□□ 1.81
CCDC47-204ENST00000582252 PPP1R1BQ9UD71 204 aaPredicted RBP26.39■■□□□ 1.81
CCDC47-204ENST00000582252 BAZ2AQ9UIF9 1905 aaKnown RBP26.38■■□□□ 1.81
CCDC47-204ENST00000582252 SNED1Q8TER0 1413 aa26.38■■□□□ 1.81
CCDC47-204ENST00000582252 RAB11FIP4Q86YS3 637 aa26.38■■□□□ 1.81
CCDC47-204ENST00000582252 ZNF384Q8TF68 577 aa26.38■■□□□ 1.81
CCDC47-204ENST00000582252 DDX19AQ9NUU7 478 aaKnown RBP26.38■■□□□ 1.81
CCDC47-204ENST00000582252 STK36Q9NRP7 1315 aa26.37■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms