RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 GAS6Q14393 721 aa10.09□□□□□ -0.79
SRSF1-203ENST00000581497 EAPPQ56P03 285 aaPredicted RBP10.09□□□□□ -0.79
SRSF1-203ENST00000581497 TMC4Q7Z404 712 aa10.09□□□□□ -0.79
SRSF1-203ENST00000581497 SP8Q8IXZ3 490 aa10.09□□□□□ -0.79
SRSF1-203ENST00000581497 NIM1KQ8IY84 436 aa10.09□□□□□ -0.79
SRSF1-203ENST00000581497 CUEDC1Q9NWM3 386 aaPredicted RBP10.09□□□□□ -0.79
SRSF1-203ENST00000581497 ATP5J2-PTCD1G3V325 749 aa10.08□□□□□ -0.8
SRSF1-203ENST00000581497 PPIP5K2O43314 1243 aa10.08□□□□□ -0.8
SRSF1-203ENST00000581497 HSP90B1P14625 803 aaKnown RBP10.08□□□□□ -0.8
SRSF1-203ENST00000581497 LMOD1P29536 600 aaPredicted RBP10.08□□□□□ -0.8
SRSF1-203ENST00000581497 RAB15P59190 212 aa10.08□□□□□ -0.8
SRSF1-203ENST00000581497 GRAPQ13588 217 aa10.08□□□□□ -0.8
SRSF1-203ENST00000581497 CCDC30Q5VVM6 783 aa10.08□□□□□ -0.8
SRSF1-203ENST00000581497 DPP8Q6V1X1 898 aaPredicted RBP10.08□□□□□ -0.8
SRSF1-203ENST00000581497 GRAPLQ8TC17 118 aaPredicted RBP10.08□□□□□ -0.8
SRSF1-203ENST00000581497 RTFDC1Q9BY42 306 aaPredicted RBP10.08□□□□□ -0.8
SRSF1-203ENST00000581497 GJA3Q9Y6H8 435 aa10.08□□□□□ -0.8
SRSF1-203ENST00000581497 DICER1Q9UPY3 1922 aaKnown RBP10.07□□□□□ -0.8
SRSF1-203ENST00000581497 CCDC88AQ3V6T2 1871 aa10.07□□□□□ -0.8
SRSF1-203ENST00000581497 ANP32CO43423 234 aa10.07□□□□□ -0.8
SRSF1-203ENST00000581497 DDX58O95786 925 aaKnown RBP10.07□□□□□ -0.8
SRSF1-203ENST00000581497 PTGIRP43119 386 aa10.07□□□□□ -0.8
SRSF1-203ENST00000581497 SF3B3Q15393 1217 aaKnown RBP10.07□□□□□ -0.8
SRSF1-203ENST00000581497 AOC3Q16853 763 aa10.07□□□□□ -0.8
SRSF1-203ENST00000581497 CCDC27Q2M243 656 aa10.07□□□□□ -0.8
SRSF1-203ENST00000581497 LYSMD3Q7Z3D4 306 aa10.07□□□□□ -0.8
SRSF1-203ENST00000581497 C8orf58Q8NAV2 365 aa10.07□□□□□ -0.8
SRSF1-203ENST00000581497 FAM89AQ96GI7 184 aa10.07□□□□□ -0.8
SRSF1-203ENST00000581497 PHAXQ9H814 394 aaKnown RBP10.07□□□□□ -0.8
SRSF1-203ENST00000581497 ENAMQ9NRM1 1142 aa10.07□□□□□ -0.8
SRSF1-203ENST00000581497 IRS4O14654 1257 aaPredicted RBP10.06□□□□□ -0.8
SRSF1-203ENST00000581497 LILRA1O75019 489 aa10.06□□□□□ -0.8
SRSF1-203ENST00000581497 ADD1P35611 737 aaKnown RBP10.06□□□□□ -0.8
SRSF1-203ENST00000581497 CCDC184Q52MB2 194 aa10.06□□□□□ -0.8
SRSF1-203ENST00000581497 SLC51AQ86UW1 340 aa10.06□□□□□ -0.8
SRSF1-203ENST00000581497 KDF1Q8NAX2 398 aaPredicted RBP10.06□□□□□ -0.8
SRSF1-203ENST00000581497 ZNF428Q96B54 188 aa10.06□□□□□ -0.8
SRSF1-203ENST00000581497 MRS2Q9HD23 443 aa10.06□□□□□ -0.8
SRSF1-203ENST00000581497 CACNA1SQ13698 1873 aa10.06□□□□□ -0.8
SRSF1-203ENST00000581497 PASKQ96RG2 1323 aa10.06□□□□□ -0.8
SRSF1-203ENST00000581497 ERVH48-1M5A8F1 160 aa10.05□□□□□ -0.8
SRSF1-203ENST00000581497 KIAA2012Q0VF49 1180 aa10.05□□□□□ -0.8
SRSF1-203ENST00000581497 WWC1Q8IX03 1113 aa10.05□□□□□ -0.8
SRSF1-203ENST00000581497 ZBTB38Q8NAP3 1195 aaPredicted RBP10.05□□□□□ -0.8
SRSF1-203ENST00000581497 CCDC191Q8NCU4 936 aa10.05□□□□□ -0.8
SRSF1-203ENST00000581497 MYD88Q99836 296 aa10.05□□□□□ -0.8
SRSF1-203ENST00000581497 STK31Q9BXU1 1019 aa10.05□□□□□ -0.8
SRSF1-203ENST00000581497 SLC24A3Q9HC58 644 aa10.05□□□□□ -0.8
SRSF1-203ENST00000581497 ZNRF3Q9ULT6 936 aa10.05□□□□□ -0.8
SRSF1-203ENST00000581497 TMEM88BA6NKF7 163 aa10.04□□□□□ -0.8
SRSF1-203ENST00000581497 EPS15P42566 896 aa10.04□□□□□ -0.8
SRSF1-203ENST00000581497 SCNN1DP51172 638 aa10.04□□□□□ -0.8
SRSF1-203ENST00000581497 CXCL9Q07325 125 aa10.04□□□□□ -0.8
SRSF1-203ENST00000581497 USP50Q70EL3 339 aaPredicted RBP10.04□□□□□ -0.8
SRSF1-203ENST00000581497 CNTROBQ8N137 903 aa10.04□□□□□ -0.8
SRSF1-203ENST00000581497 TSPYL6Q8N831 410 aa10.04□□□□□ -0.8
SRSF1-203ENST00000581497 METTL22Q9BUU2 404 aaPredicted RBP10.04□□□□□ -0.8
SRSF1-203ENST00000581497 CWC25Q9NXE8 425 aaPredicted RBP10.04□□□□□ -0.8
SRSF1-203ENST00000581497 IL16Q14005 1332 aa10.04□□□□□ -0.8
SRSF1-203ENST00000581497 COL4A5P29400 1685 aa10.03□□□□□ -0.8
SRSF1-203ENST00000581497 SCN4AP35499 1836 aa10.03□□□□□ -0.8
SRSF1-203ENST00000581497 PCCAP05165 728 aaPredicted RBP10.03□□□□□ -0.8
SRSF1-203ENST00000581497 RPS8P62241 208 aaKnown RBP10.03□□□□□ -0.8
SRSF1-203ENST00000581497 TNIP1Q15025 636 aa10.03□□□□□ -0.8
SRSF1-203ENST00000581497 CCDC152Q4G0S7 254 aa10.03□□□□□ -0.8
SRSF1-203ENST00000581497 MAP1SQ66K74 1059 aaPredicted RBP10.03□□□□□ -0.8
SRSF1-203ENST00000581497 CIAPIN1Q6FI81 312 aa10.03□□□□□ -0.8
SRSF1-203ENST00000581497 CELF1Q92879 486 aaKnown RBP10.03□□□□□ -0.8
SRSF1-203ENST00000581497 TSR2Q969E8 191 aaKnown RBP10.03□□□□□ -0.8
SRSF1-203ENST00000581497 MKRN1Q9UHC7 482 aaKnown RBP10.03□□□□□ -0.8
SRSF1-203ENST00000581497 NSFL1CQ9UNZ2 370 aaKnown RBP10.03□□□□□ -0.8
SRSF1-203ENST00000581497 PDE8AO60658 829 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 NEXNQ0ZGT2 675 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 WASHC4Q2M389 1173 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 TWISTNBQ3B726 338 aaPredicted RBP10.02□□□□□ -0.81
SRSF1-203ENST00000581497 KSR2Q6VAB6 950 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 PRICKLE2Q7Z3G6 844 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 ZNF837Q96EG3 531 aaPredicted RBP10.02□□□□□ -0.81
SRSF1-203ENST00000581497 GMCL1Q96IK5 515 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 EYA3Q99504 573 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 BCL2L13Q9BXK5 485 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 ADARB2Q9NS39 739 aaKnown RBP10.02□□□□□ -0.81
SRSF1-203ENST00000581497 GPRC5DQ9NZD1 345 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 MAP3K2Q9Y2U5 619 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 CDHR2Q9BYE9 1310 aa10.02□□□□□ -0.81
SRSF1-203ENST00000581497 CNTNAP1P78357 1384 aa10.01□□□□□ -0.81
SRSF1-203ENST00000581497 ANKRD36CQ5JPF3 1778 aa10.01□□□□□ -0.81
SRSF1-203ENST00000581497 PI4KAP2A4QPH2 592 aa10.01□□□□□ -0.81
SRSF1-203ENST00000581497 PHF20L1A8MW92 1017 aa10.01□□□□□ -0.81
SRSF1-203ENST00000581497 RAD17O75943 681 aa10.01□□□□□ -0.81
SRSF1-203ENST00000581497 HSPA1AP0DMV8 641 aaKnown RBP10.01□□□□□ -0.81
SRSF1-203ENST00000581497 HSPA1BP0DMV9 641 aaKnown RBP10.01□□□□□ -0.81
SRSF1-203ENST00000581497 RHOQP17081 205 aa10.01□□□□□ -0.81
SRSF1-203ENST00000581497 GMPSP49915 693 aaPredicted RBP10.01□□□□□ -0.81
SRSF1-203ENST00000581497 SKIV2LQ15477 1246 aaKnown RBP10.01□□□□□ -0.81
SRSF1-203ENST00000581497 PLA2G4EQ3MJ16 856 aa10.01□□□□□ -0.81
SRSF1-203ENST00000581497 WDR63Q8IWG1 891 aa10.01□□□□□ -0.81
SRSF1-203ENST00000581497 PI4KAP1Q8N8J0 262 aa10.01□□□□□ -0.81
SRSF1-203ENST00000581497 PNMA1Q8ND90 353 aa10.01□□□□□ -0.81
SRSF1-203ENST00000581497 YDJCA8MPS7 323 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms