RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 TTC39AQ5SRH9 613 aa26.17■■□□□ 1.78
CSNK1D-216ENST00000581108 CEP85Q6P2H3 762 aa26.17■■□□□ 1.78
CSNK1D-216ENST00000581108 ZSCAN29Q8IWY8 852 aaPredicted RBP26.17■■□□□ 1.78
CSNK1D-216ENST00000581108 TRIM17Q9Y577 477 aa26.17■■□□□ 1.78
CSNK1D-216ENST00000581108 DDTLA6NHG4 134 aaPredicted RBP26.16■■□□□ 1.78
CSNK1D-216ENST00000581108 LDHCP07864 332 aa26.16■■□□□ 1.78
CSNK1D-216ENST00000581108 RHBDL3P58872 404 aa26.16■■□□□ 1.78
CSNK1D-216ENST00000581108 GSTO1P78417 241 aa26.16■■□□□ 1.78
CSNK1D-216ENST00000581108 OTOP1Q7RTM1 612 aa26.16■■□□□ 1.78
CSNK1D-216ENST00000581108 CD99L2Q8TCZ2 262 aa26.16■■□□□ 1.78
CSNK1D-216ENST00000581108 ERO1AQ96HE7 468 aa26.16■■□□□ 1.78
CSNK1D-216ENST00000581108 LRP2BPQ9P2M1 347 aa26.16■■□□□ 1.78
CSNK1D-216ENST00000581108 ATRNL1Q5VV63 1379 aa26.16■■□□□ 1.78
CSNK1D-216ENST00000581108 SP3Q02447 781 aa26.15■■□□□ 1.78
CSNK1D-216ENST00000581108 ZFYVE28Q9HCC9 887 aa26.15■■□□□ 1.78
CSNK1D-216ENST00000581108 MYO5AQ9Y4I1 1855 aaKnown RBP26.15■■□□□ 1.78
CSNK1D-216ENST00000581108 PHF20L1A8MW92 1017 aa26.14■■□□□ 1.78
CSNK1D-216ENST00000581108 BTBD19C9JJ37 291 aa26.14■■□□□ 1.78
CSNK1D-216ENST00000581108 SLURP2P0DP57 97 aa26.14■■□□□ 1.78
CSNK1D-216ENST00000581108 NOL9Q5SY16 702 aaKnown RBP26.14■■□□□ 1.78
CSNK1D-216ENST00000581108 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.14■■□□□ 1.78
CSNK1D-216ENST00000581108 CAP1Q01518 475 aa26.13■■□□□ 1.77
CSNK1D-216ENST00000581108 EAF2Q96CJ1 260 aaPredicted RBP26.13■■□□□ 1.77
CSNK1D-216ENST00000581108 CCDC8Q9H0W5 538 aaPredicted RBP26.13■■□□□ 1.77
CSNK1D-216ENST00000581108 TLR7Q9NYK1 1049 aaKnown RBP26.13■■□□□ 1.77
CSNK1D-216ENST00000581108 DBNLQ9UJU6 430 aaKnown RBP26.13■■□□□ 1.77
CSNK1D-216ENST00000581108 MS4A1P11836 297 aa26.12■■□□□ 1.77
CSNK1D-216ENST00000581108 MAP3K10Q02779 954 aa26.12■■□□□ 1.77
CSNK1D-216ENST00000581108 CYP2E1P05181 493 aaPredicted RBP26.11■■□□□ 1.77
CSNK1D-216ENST00000581108 ZNF512BQ96KM6 892 aaPredicted RBP26.11■■□□□ 1.77
CSNK1D-216ENST00000581108 KCNH4Q9UQ05 1017 aa26.11■■□□□ 1.77
CSNK1D-216ENST00000581108 EXOC6BQ9Y2D4 811 aa26.11■■□□□ 1.77
CSNK1D-216ENST00000581108 EFCC1Q9HA90 598 aa26.1■■□□□ 1.77
CSNK1D-216ENST00000581108 ZCCHC17Q9NP64 241 aaKnown RBP26.1■■□□□ 1.77
CSNK1D-216ENST00000581108 COG6Q9Y2V7 657 aa26.1■■□□□ 1.77
CSNK1D-216ENST00000581108 NPM3O75607 178 aaKnown RBP26.09■■□□□ 1.77
CSNK1D-216ENST00000581108 MAP4K4O95819 1239 aaPredicted RBP26.09■■□□□ 1.77
CSNK1D-216ENST00000581108 ZAP70P43403 619 aa26.09■■□□□ 1.77
CSNK1D-216ENST00000581108 SCYL3Q8IZE3 742 aa26.09■■□□□ 1.77
CSNK1D-216ENST00000581108 PTPN22Q9Y2R2 807 aa26.09■■□□□ 1.77
CSNK1D-216ENST00000581108 HTTP42858 3142 aa26.09■■□□□ 1.77
CSNK1D-216ENST00000581108 TNRC18O15417 2968 aaPredicted RBP26.09■■□□□ 1.77
CSNK1D-216ENST00000581108 TLR2O60603 784 aa26.08■■□□□ 1.77
CSNK1D-216ENST00000581108 NAA16Q6N069 864 aaPredicted RBP26.08■■□□□ 1.77
CSNK1D-216ENST00000581108 SH3RF3Q8TEJ3 882 aaPredicted RBP26.08■■□□□ 1.77
CSNK1D-216ENST00000581108 RCAN3Q9UKA8 241 aa26.08■■□□□ 1.77
CSNK1D-216ENST00000581108 MOGSQ13724 837 aa26.07■■□□□ 1.76
CSNK1D-216ENST00000581108 TEX11Q8IYF3 940 aa26.07■■□□□ 1.76
CSNK1D-216ENST00000581108 PIH1D3Q9NQM4 214 aaKnown RBP26.07■■□□□ 1.76
CSNK1D-216ENST00000581108 PICK1Q9NRD5 415 aa26.07■■□□□ 1.76
CSNK1D-216ENST00000581108 ZHX2Q9Y6X8 837 aa26.07■■□□□ 1.76
CSNK1D-216ENST00000581108 MAST2Q6P0Q8 1798 aa26.06■■□□□ 1.76
CSNK1D-216ENST00000581108 PTPRAP18433 802 aa26.06■■□□□ 1.76
CSNK1D-216ENST00000581108 ANKRD23Q86SG2 305 aa26.06■■□□□ 1.76
CSNK1D-216ENST00000581108 ADGRA1Q86SQ6 560 aa26.06■■□□□ 1.76
CSNK1D-216ENST00000581108 ERC1Q8IUD2 1116 aa26.06■■□□□ 1.76
CSNK1D-216ENST00000581108 NOL10Q9BSC4 688 aaKnown RBP26.06■■□□□ 1.76
CSNK1D-216ENST00000581108 OSBPL5Q9H0X9 879 aaPredicted RBP26.06■■□□□ 1.76
CSNK1D-216ENST00000581108 AATFQ9NY61 560 aaKnown RBP eCLIP26.06■■□□□ 1.76
CSNK1D-216ENST00000581108 DOCK1Q14185 1865 aa26.05■■□□□ 1.76
CSNK1D-216ENST00000581108 FAM196BA6NMK8 535 aa26.05■■□□□ 1.76
CSNK1D-216ENST00000581108 PDHXO00330 501 aa26.05■■□□□ 1.76
CSNK1D-216ENST00000581108 CXCL11O14625 94 aa26.05■■□□□ 1.76
CSNK1D-216ENST00000581108 TBC1D12O60347 775 aa26.05■■□□□ 1.76
CSNK1D-216ENST00000581108 CTNND1O60716 968 aaKnown RBP26.05■■□□□ 1.76
CSNK1D-216ENST00000581108 ZBTB40Q9NUA8 1239 aa26.05■■□□□ 1.76
CSNK1D-216ENST00000581108 DDX19BQ9UMR2 479 aa26.05■■□□□ 1.76
CSNK1D-216ENST00000581108 PHIPQ8WWQ0 1821 aa26.04■■□□□ 1.76
CSNK1D-216ENST00000581108 CDK5RAP2Q96SN8 1893 aa26.04■■□□□ 1.76
CSNK1D-216ENST00000581108 CENPFP49454 3210 aa26.04■■□□□ 1.76
CSNK1D-216ENST00000581108 BAG3O95817 575 aa26.04■■□□□ 1.76
CSNK1D-216ENST00000581108 AACSQ86V21 672 aa26.04■■□□□ 1.76
CSNK1D-216ENST00000581108 RPAP2Q8IXW5 612 aaPredicted RBP26.04■■□□□ 1.76
CSNK1D-216ENST00000581108 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.04■■□□□ 1.762e-8■■■■■ 42
CSNK1D-216ENST00000581108 IL1RAPL2Q9NP60 686 aa26.04■■□□□ 1.76
CSNK1D-216ENST00000581108 AFG3L2Q9Y4W6 797 aa26.04■■□□□ 1.76
CSNK1D-216ENST00000581108 ZSWIM8A7E2V4 1837 aa26.04■■□□□ 1.76
CSNK1D-216ENST00000581108 PPP4CP60510 307 aa26.03■■□□□ 1.76
CSNK1D-216ENST00000581108 SIRT2Q8IXJ6 389 aa26.03■■□□□ 1.76
CSNK1D-216ENST00000581108 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.03■■□□□ 1.76
CSNK1D-216ENST00000581108 NDUFB9Q9Y6M9 179 aa26.03■■□□□ 1.76
CSNK1D-216ENST00000581108 ARHGEF6Q15052 776 aa26.02■■□□□ 1.76
CSNK1D-216ENST00000581108 HSP90AB4PQ58FF6 505 aa26.02■■□□□ 1.76
CSNK1D-216ENST00000581108 GPAT2Q6NUI2 795 aa26.02■■□□□ 1.76
CSNK1D-216ENST00000581108 C17orf99Q6UX52 265 aa26.02■■□□□ 1.76
CSNK1D-216ENST00000581108 RHPN1Q8TCX5 695 aa26.02■■□□□ 1.76
CSNK1D-216ENST00000581108 ARHGAP39Q9C0H5 1083 aa26.02■■□□□ 1.76
CSNK1D-216ENST00000581108 CPA4Q9UI42 421 aa26.02■■□□□ 1.76
CSNK1D-216ENST00000581108 COL2A1P02458 1487 aaPredicted RBP26.02■■□□□ 1.76
CSNK1D-216ENST00000581108 PTPRFP10586 1907 aa26.02■■□□□ 1.76
CSNK1D-216ENST00000581108 APBB1O00213 710 aa26.01■■□□□ 1.75
CSNK1D-216ENST00000581108 CCDC84Q86UT8 332 aaPredicted RBP26.01■■□□□ 1.75
CSNK1D-216ENST00000581108 TGFBRAP1Q8WUH2 860 aa26.01■■□□□ 1.75
CSNK1D-216ENST00000581108 FOCADQ5VW36 1801 aa26■■□□□ 1.75
CSNK1D-216ENST00000581108 A0A0G2JLL6 359 aaPredicted RBP26■■□□□ 1.75
CSNK1D-216ENST00000581108 IDH1O75874 414 aaKnown RBP26■■□□□ 1.75
CSNK1D-216ENST00000581108 PLCG2P16885 1265 aa26■■□□□ 1.75
CSNK1D-216ENST00000581108 LACTBP83111 547 aaPredicted RBP26■■□□□ 1.75
CSNK1D-216ENST00000581108 PRRT2Q7Z6L0 340 aaPredicted RBP26■■□□□ 1.75
CSNK1D-216ENST00000581108 ANTXR1Q9H6X2 564 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms