RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 A0A0G2JLL6 359 aaPredicted RBP12.76□□□□□ -0.37
GGA3-210ENST00000580799 GJB1P08034 283 aa12.76□□□□□ -0.37
GGA3-210ENST00000580799 UBXN2AP68543 259 aa12.76□□□□□ -0.37
GGA3-210ENST00000580799 MTFR1Q15390 333 aa12.76□□□□□ -0.37
GGA3-210ENST00000580799 GPAT2Q6NUI2 795 aa12.76□□□□□ -0.37
GGA3-210ENST00000580799 PRRT2Q7Z6L0 340 aaPredicted RBP12.76□□□□□ -0.37
GGA3-210ENST00000580799 DZIP1Q86YF9 867 aaKnown RBP12.76□□□□□ -0.37
GGA3-210ENST00000580799 ZSCAN29Q8IWY8 852 aaPredicted RBP12.76□□□□□ -0.37
GGA3-210ENST00000580799 ZFPM1Q8IX07 1006 aa12.76□□□□□ -0.37
GGA3-210ENST00000580799 FAM163AQ96GL9 167 aaPredicted RBP12.76□□□□□ -0.37
GGA3-210ENST00000580799 COLQQ9Y215 455 aaPredicted RBP12.76□□□□□ -0.37
GGA3-210ENST00000580799 ZHX2Q9Y6X8 837 aa12.76□□□□□ -0.37
GGA3-210ENST00000580799 H0YGN5 161 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 CTNND1O60716 968 aaKnown RBP12.75□□□□□ -0.37
GGA3-210ENST00000580799 PTPRFP10586 1907 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 CYP2C8P10632 490 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 CCL5P13501 91 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 CAPN2P17655 700 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 PTPRAP18433 802 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 GJA8P48165 433 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 RASGRF1Q13972 1273 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 MVPQ14764 893 aaKnown RBP12.75□□□□□ -0.37
GGA3-210ENST00000580799 SLAIN1Q8ND83 568 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 SHISA4Q96DD7 197 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 CDCA7LQ96GN5 454 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 BIN2Q9UBW5 565 aaPredicted RBP12.75□□□□□ -0.37
GGA3-210ENST00000580799 ABCF2Q9UG63 623 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 NOB1Q9ULX3 412 aaKnown RBP12.75□□□□□ -0.37
GGA3-210ENST00000580799 PA2G4Q9UQ80 394 aaKnown RBP12.75□□□□□ -0.37
GGA3-210ENST00000580799 AKAP2Q9Y2D5 859 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 AFG3L2Q9Y4W6 797 aa12.75□□□□□ -0.37
GGA3-210ENST00000580799 PHIPQ8WWQ0 1821 aa12.74□□□□□ -0.37
GGA3-210ENST00000580799 MROH7-TTC4A0A0A0MT08 1334 aa12.74□□□□□ -0.37
GGA3-210ENST00000580799 NPM3O75607 178 aaKnown RBP12.74□□□□□ -0.37
GGA3-210ENST00000580799 ECM2O94769 699 aaPredicted RBP12.74□□□□□ -0.37
GGA3-210ENST00000580799 ADORA1P30542 326 aa12.74□□□□□ -0.37
GGA3-210ENST00000580799 PRKCZQ05513 592 aa12.74□□□□□ -0.37
GGA3-210ENST00000580799 HTATIP2Q9BUP3 242 aa12.74□□□□□ -0.37
GGA3-210ENST00000580799 RNF208Q9H0X6 261 aa12.74□□□□□ -0.37
GGA3-210ENST00000580799 COL2A1P02458 1487 aaPredicted RBP12.73□□□□□ -0.37
GGA3-210ENST00000580799 MAP4K4O95819 1239 aaPredicted RBP12.73□□□□□ -0.37
GGA3-210ENST00000580799 GNAI3P08754 354 aa12.73□□□□□ -0.37
GGA3-210ENST00000580799 MTX1Q13505 466 aa12.73□□□□□ -0.37
GGA3-210ENST00000580799 GADL1Q6ZQY3 521 aa12.73□□□□□ -0.37
GGA3-210ENST00000580799 SH3BP5LQ7L8J4 393 aa12.73□□□□□ -0.37
GGA3-210ENST00000580799 UBE2Q1Q7Z7E8 422 aa12.73□□□□□ -0.37
GGA3-210ENST00000580799 SMCR8Q8TEV9 937 aaPredicted RBP12.73□□□□□ -0.37
GGA3-210ENST00000580799 ARHGAP45Q92619 1136 aa12.73□□□□□ -0.37
GGA3-210ENST00000580799 MEIS3Q99687 375 aa12.73□□□□□ -0.37
GGA3-210ENST00000580799 GPR75-ASB3A0A0A6YYF3 556 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 A0A1B0GUL7 405 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 DDTLA6NHG4 134 aaPredicted RBP12.72□□□□□ -0.37
GGA3-210ENST00000580799 SRGAP3O43295 1099 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 ADCY3O60266 1144 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 TBC1D12O60347 775 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 BTDP43251 543 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 TIMM10P62072 90 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 GSTO1P78417 241 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 MECOMQ03112 1051 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 PICALMQ13492 652 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 ERICH6Q7L0X2 663 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 PXYLP1Q8TE99 480 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 U2AF1L4Q8WU68 220 aaKnown RBP12.72□□□□□ -0.37
GGA3-210ENST00000580799 DPF3Q92784 378 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 XAGE2Q96GT9 111 aa12.72□□□□□ -0.37
GGA3-210ENST00000580799 DDX4Q9NQI0 724 aaKnown RBP12.72□□□□□ -0.37
GGA3-210ENST00000580799 LOC285556D6RIA3 1793 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 TRIM75PA6NK02 468 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 TNPO2O14787 897 aaKnown RBP12.71□□□□□ -0.37
GGA3-210ENST00000580799 LDHCP07864 332 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 FLT3LGP49771 235 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 TFCP2Q12800 502 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 IRF5Q13568 498 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 PROCA1Q8NCQ7 364 aaPredicted RBP12.71□□□□□ -0.37
GGA3-210ENST00000580799 TBC1D2Q9BYX2 928 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 PNMA3Q9UL41 463 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 GABRQQ9UN88 632 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 AGTPBP1Q9UPW5 1226 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 NR2E3Q9Y5X4 410 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 CEP290O15078 2479 aa12.71□□□□□ -0.37
GGA3-210ENST00000580799 ATAD5Q96QE3 1844 aa12.7□□□□□ -0.38
GGA3-210ENST00000580799 SGPL1O95470 568 aa12.7□□□□□ -0.38
GGA3-210ENST00000580799 RHBDL3P58872 404 aa12.7□□□□□ -0.38
GGA3-210ENST00000580799 GORABQ5T7V8 394 aa12.7□□□□□ -0.38
GGA3-210ENST00000580799 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
GGA3-210ENST00000580799 OSBPL5Q9H0X9 879 aaPredicted RBP12.7□□□□□ -0.38
GGA3-210ENST00000580799 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.7□□□□□ -0.38
GGA3-210ENST00000580799 FARP2O94887 1054 aaPredicted RBP12.69□□□□□ -0.38
GGA3-210ENST00000580799 GCLCP48506 637 aaPredicted RBP12.69□□□□□ -0.38
GGA3-210ENST00000580799 RARSP54136 660 aaKnown RBP12.69□□□□□ -0.38
GGA3-210ENST00000580799 PABPC4Q13310 644 aaKnown RBP eCLIP12.69□□□□□ -0.38
GGA3-210ENST00000580799 SPATA5Q8NB90 893 aa12.69□□□□□ -0.38
GGA3-210ENST00000580799 ZNF384Q8TF68 577 aa12.69□□□□□ -0.38
GGA3-210ENST00000580799 COA7Q96BR5 231 aa12.69□□□□□ -0.38
GGA3-210ENST00000580799 NSUN4Q96CB9 384 aaKnown RBP12.69□□□□□ -0.38
GGA3-210ENST00000580799 NEUROD6Q96NK8 337 aa12.69□□□□□ -0.38
GGA3-210ENST00000580799 UNC93B1Q9H1C4 597 aa12.69□□□□□ -0.38
GGA3-210ENST00000580799 HMG20BQ9P0W2 317 aa12.69□□□□□ -0.38
GGA3-210ENST00000580799 IPO8O15397 1037 aaKnown RBP12.68□□□□□ -0.38
GGA3-210ENST00000580799 INHAP05111 366 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms