RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 MS4A1P11836 297 aa17.85■□□□□ 0.45
SMARCE1-216ENST00000580419 MECOMQ03112 1051 aa17.85■□□□□ 0.45
SMARCE1-216ENST00000580419 GORABQ5T7V8 394 aa17.85■□□□□ 0.45
SMARCE1-216ENST00000580419 FAM43AQ8N2R8 423 aa17.85■□□□□ 0.45
SMARCE1-216ENST00000580419 NSUN4Q96CB9 384 aaKnown RBP17.85■□□□□ 0.45
SMARCE1-216ENST00000580419 EFCC1Q9HA90 598 aa17.85■□□□□ 0.45
SMARCE1-216ENST00000580419 PTPN22Q9Y2R2 807 aa17.85■□□□□ 0.45
SMARCE1-216ENST00000580419 BTBD19C9JJ37 291 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 CTNND1O60716 968 aaKnown RBP17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 INPP5BP32019 993 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 RGS3P49796 1198 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 PRMT2P55345 433 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 RHBDL3P58872 404 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 TCP10Q12799 353 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 MIGA2Q7L4E1 593 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 ZNF384Q8TF68 577 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 NEUROD6Q96NK8 337 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 TNNQ9UQP3 1299 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 SLC45A1Q9Y2W3 748 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 MKI67P46013 3256 aaKnown RBP17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 PTPRFP10586 1907 aa17.84■□□□□ 0.45
SMARCE1-216ENST00000580419 BRCA2P51587 3418 aa17.83■□□□□ 0.45
SMARCE1-216ENST00000580419 BTDP43251 543 aa17.83■□□□□ 0.44
SMARCE1-216ENST00000580419 TNNI3KQ59H18 835 aa17.83■□□□□ 0.44
SMARCE1-216ENST00000580419 TBC1D2Q9BYX2 928 aa17.83■□□□□ 0.44
SMARCE1-216ENST00000580419 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
SMARCE1-216ENST00000580419 FPGT-TNNI3KV9GXZ4 949 aa17.83■□□□□ 0.44
SMARCE1-216ENST00000580419 PLCG2P16885 1265 aa17.82■□□□□ 0.44
SMARCE1-216ENST00000580419 MCAMP43121 646 aa17.82■□□□□ 0.44
SMARCE1-216ENST00000580419 CCDC158Q5M9N0 1113 aa17.82■□□□□ 0.44
SMARCE1-216ENST00000580419 SCYL3Q8IZE3 742 aa17.82■□□□□ 0.44
SMARCE1-216ENST00000580419 CD99L2Q8TCZ2 262 aa17.82■□□□□ 0.44
SMARCE1-216ENST00000580419 DOCK1Q14185 1865 aa17.82■□□□□ 0.44
SMARCE1-216ENST00000580419 MAST2Q6P0Q8 1798 aa17.81■□□□□ 0.44
SMARCE1-216ENST00000580419 PPP4CP60510 307 aa17.81■□□□□ 0.44
SMARCE1-216ENST00000580419 MOGSQ13724 837 aa17.81■□□□□ 0.44
SMARCE1-216ENST00000580419 C17orf99Q6UX52 265 aa17.81■□□□□ 0.44
SMARCE1-216ENST00000580419 SH3BP5LQ7L8J4 393 aa17.81■□□□□ 0.44
SMARCE1-216ENST00000580419 FASTKD5Q7L8L6 764 aaKnown RBP17.81■□□□□ 0.44
SMARCE1-216ENST00000580419 CERS3Q8IU89 383 aa17.81■□□□□ 0.44
SMARCE1-216ENST00000580419 ZFPM1Q8IX07 1006 aa17.81■□□□□ 0.44
SMARCE1-216ENST00000580419 PHIPQ8WWQ0 1821 aa17.81■□□□□ 0.44
SMARCE1-216ENST00000580419 ADGRA2Q96PE1 1338 aa17.8■□□□□ 0.44
SMARCE1-216ENST00000580419 FOCADQ5VW36 1801 aa17.8■□□□□ 0.44
SMARCE1-216ENST00000580419 RLBP1P12271 317 aa17.8■□□□□ 0.44
SMARCE1-216ENST00000580419 SOX10P56693 466 aa17.8■□□□□ 0.44
SMARCE1-216ENST00000580419 LACTBP83111 547 aaPredicted RBP17.8■□□□□ 0.44
SMARCE1-216ENST00000580419 ERC1Q8IUD2 1116 aa17.8■□□□□ 0.44
SMARCE1-216ENST00000580419 PICK1Q9NRD5 415 aa17.8■□□□□ 0.44
SMARCE1-216ENST00000580419 A0A0G2JLL6 359 aaPredicted RBP17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 SURF6O75683 361 aaKnown RBP17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 PTPRAP18433 802 aa17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 KIF22Q14807 665 aa17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 HSP90AB4PQ58FF6 505 aa17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 PRRT2Q7Z6L0 340 aaPredicted RBP17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 NBPF11Q86T75 865 aa17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 ITPRIPQ8IWB1 547 aa17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 OSBPL5Q9H0X9 879 aaPredicted RBP17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 DHX36Q9H2U1 1008 aaKnown RBP17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 DDX4Q9NQI0 724 aaKnown RBP17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 HERC5Q9UII4 1024 aaKnown RBP17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 AFG3L2Q9Y4W6 797 aa17.79■□□□□ 0.44
SMARCE1-216ENST00000580419 DDTLA6NHG4 134 aaPredicted RBP17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 BAG3O95817 575 aa17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 CEP85Q6P2H3 762 aa17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 METTL16Q86W50 562 aaKnown RBP17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 ZSCAN29Q8IWY8 852 aaPredicted RBP17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 PARK7Q99497 189 aaKnown RBP17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 CHMP4BQ9H444 224 aaKnown RBP17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 GINM1Q9NU53 330 aa17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 LRP2BPQ9P2M1 347 aa17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 CDK5RAP2Q96SN8 1893 aa17.78■□□□□ 0.44
SMARCE1-216ENST00000580419 PDHXO00330 501 aa17.77■□□□□ 0.44
SMARCE1-216ENST00000580419 TTC39AQ5SRH9 613 aa17.77■□□□□ 0.44
SMARCE1-216ENST00000580419 ZNF333Q96JL9 665 aa17.77■□□□□ 0.44
SMARCE1-216ENST00000580419 RAI14Q9P0K7 980 aa17.77■□□□□ 0.44
SMARCE1-216ENST00000580419 CAP1Q01518 475 aa17.76■□□□□ 0.43
SMARCE1-216ENST00000580419 OS9Q13438 667 aaPredicted RBP17.76■□□□□ 0.43
SMARCE1-216ENST00000580419 GPAT2Q6NUI2 795 aa17.76■□□□□ 0.43
SMARCE1-216ENST00000580419 PI16Q6UXB8 463 aa17.76■□□□□ 0.43
SMARCE1-216ENST00000580419 DBNDD2Q9BQY9 259 aa17.76■□□□□ 0.43
SMARCE1-216ENST00000580419 NOL10Q9BSC4 688 aaKnown RBP17.76■□□□□ 0.43
SMARCE1-216ENST00000580419 PI4KBQ9UBF8 816 aa17.76■□□□□ 0.43
SMARCE1-216ENST00000580419 ZHX2Q9Y6X8 837 aa17.76■□□□□ 0.43
SMARCE1-216ENST00000580419 MYO5AQ9Y4I1 1855 aaKnown RBP17.75■□□□□ 0.43
SMARCE1-216ENST00000580419 CYP2E1P05181 493 aaPredicted RBP17.75■□□□□ 0.43
SMARCE1-216ENST00000580419 CAPN2P17655 700 aa17.75■□□□□ 0.43
SMARCE1-216ENST00000580419 HOXD10P28358 340 aa17.75■□□□□ 0.43
SMARCE1-216ENST00000580419 PRPF38BQ5VTL8 546 aaKnown RBP17.75■□□□□ 0.43
SMARCE1-216ENST00000580419 NAA16Q6N069 864 aaPredicted RBP17.75■□□□□ 0.43
SMARCE1-216ENST00000580419 TBC1D9Q6ZT07 1266 aa17.75■□□□□ 0.43
SMARCE1-216ENST00000580419 RPAP2Q8IXW5 612 aaPredicted RBP17.75■□□□□ 0.43
SMARCE1-216ENST00000580419 DBNLQ9UJU6 430 aaKnown RBP17.75■□□□□ 0.43
SMARCE1-216ENST00000580419 MGAMO43451 1857 aa17.74■□□□□ 0.43
SMARCE1-216ENST00000580419 BCRP11274 1271 aa17.74■□□□□ 0.43
SMARCE1-216ENST00000580419 FOXP4Q8IVH2 680 aaPredicted RBP17.74■□□□□ 0.43
SMARCE1-216ENST00000580419 PROCA1Q8NCQ7 364 aaPredicted RBP17.74■□□□□ 0.43
SMARCE1-216ENST00000580419 DDX19BQ9UMR2 479 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms