RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 USP5P45974 858 aa9.61□□□□□ -0.87
PPP4R1-216ENST00000580283 TRAPPC3LQ5T215 181 aa9.61□□□□□ -0.87
PPP4R1-216ENST00000580283 SMG9Q9H0W8 520 aaKnown RBP9.61□□□□□ -0.87
PPP4R1-216ENST00000580283 SBF2Q86WG5 1849 aa9.61□□□□□ -0.87
PPP4R1-216ENST00000580283 HOXD8P13378 290 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-216ENST00000580283 NID1P14543 1247 aa9.6□□□□□ -0.87
PPP4R1-216ENST00000580283 HYAL2Q12891 473 aa9.6□□□□□ -0.87
PPP4R1-216ENST00000580283 FAM196AQ6ZSG2 479 aa9.6□□□□□ -0.87
PPP4R1-216ENST00000580283 PMFBP1Q8TBY8 1022 aa9.6□□□□□ -0.87
PPP4R1-216ENST00000580283 SPACA7Q96KW9 195 aa9.6□□□□□ -0.87
PPP4R1-216ENST00000580283 PDGFDQ9GZP0 370 aaPredicted RBP9.6□□□□□ -0.87
PPP4R1-216ENST00000580283 GGNBP2Q9H3C7 697 aa9.6□□□□□ -0.87
PPP4R1-216ENST00000580283 SPATA31A1Q5TZJ5 1347 aa9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 ADGRB2O60241 1585 aa9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 BRD1O95696 1058 aa9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 AFF1P51825 1210 aaKnown RBP9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 TRIM28Q13263 835 aaKnown RBP9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 COL9A3Q14050 684 aaPredicted RBP9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 PLD4Q96BZ4 506 aa9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 SPON1Q9HCB6 807 aa9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 TMEM63CQ9P1W3 806 aa9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 GOLGB1Q14789 3259 aaKnown RBP9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 ARHGEF10O15013 1369 aa9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 PARD3Q8TEW0 1356 aa9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 NINLQ9Y2I6 1382 aa9.59□□□□□ -0.87
PPP4R1-216ENST00000580283 A6NHS1 94 aa9.58□□□□□ -0.88
PPP4R1-216ENST00000580283 SPATA31C1P0DKV0 1188 aa9.58□□□□□ -0.88
PPP4R1-216ENST00000580283 EHHADHQ08426 723 aa9.58□□□□□ -0.88
PPP4R1-216ENST00000580283 XKR5Q6UX68 686 aa9.58□□□□□ -0.88
PPP4R1-216ENST00000580283 TTC9Q92623 222 aa9.58□□□□□ -0.88
PPP4R1-216ENST00000580283 YTHDC2Q9H6S0 1430 aaKnown RBP9.57□□□□□ -0.88
PPP4R1-216ENST00000580283 KRBA1A5PL33 1030 aa9.57□□□□□ -0.88
PPP4R1-216ENST00000580283 FZD6O60353 706 aa9.57□□□□□ -0.88
PPP4R1-216ENST00000580283 C1QTNF8P60827 252 aa9.57□□□□□ -0.88
PPP4R1-216ENST00000580283 PLA2G4EQ3MJ16 856 aa9.57□□□□□ -0.88
PPP4R1-216ENST00000580283 GPAT2Q6NUI2 795 aa9.57□□□□□ -0.88
PPP4R1-216ENST00000580283 CCDC87Q9NVE4 849 aa9.57□□□□□ -0.88
PPP4R1-216ENST00000580283 BRPF3Q9ULD4 1205 aa9.57□□□□□ -0.88
PPP4R1-216ENST00000580283 MYOM1P52179 1685 aa9.57□□□□□ -0.88
PPP4R1-216ENST00000580283 RRBP1Q9P2E9 1410 aaKnown RBP9.56□□□□□ -0.88
PPP4R1-216ENST00000580283 NRKQ7Z2Y5 1582 aa9.56□□□□□ -0.88
PPP4R1-216ENST00000580283 RAC1P63000 192 aa9.56□□□□□ -0.88
PPP4R1-216ENST00000580283 NCAPG2Q86XI2 1143 aa9.56□□□□□ -0.88
PPP4R1-216ENST00000580283 WFDC8Q8IUA0 241 aa9.56□□□□□ -0.88
PPP4R1-216ENST00000580283 DMRTC2Q8IXT2 367 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-216ENST00000580283 PPP1R1BQ9UD71 204 aaPredicted RBP9.56□□□□□ -0.88
PPP4R1-216ENST00000580283 PEAK1Q9H792 1746 aa9.56□□□□□ -0.88
PPP4R1-216ENST00000580283 SPATA31E1Q6ZUB1 1445 aa9.56□□□□□ -0.88
PPP4R1-216ENST00000580283 FAM229AH3BQW9 127 aa9.55□□□□□ -0.88
PPP4R1-216ENST00000580283 CYP2E1P05181 493 aaPredicted RBP9.55□□□□□ -0.88
PPP4R1-216ENST00000580283 CES1P23141 567 aa9.55□□□□□ -0.88
PPP4R1-216ENST00000580283 NBPF8Q3BBV2 869 aa9.55□□□□□ -0.88
PPP4R1-216ENST00000580283 RGL3Q3MIN7 710 aa9.55□□□□□ -0.88
PPP4R1-216ENST00000580283 MSL1Q68DK7 614 aa9.55□□□□□ -0.88
PPP4R1-216ENST00000580283 PTF1AQ7RTS3 328 aa9.55□□□□□ -0.88
PPP4R1-216ENST00000580283 KANSL3Q9P2N6 904 aa9.55□□□□□ -0.88
PPP4R1-216ENST00000580283 PIK3C2GO75747 1445 aa9.55□□□□□ -0.88
PPP4R1-216ENST00000580283 PRR36Q9H6K5 1346 aa9.55□□□□□ -0.88
PPP4R1-216ENST00000580283 PHRF1Q9P1Y6 1649 aaKnown RBP9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 NDUFB5O43674 189 aa9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 IGHA1P01876 353 aa9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 SAFB2Q14151 953 aaKnown RBP eCLIP9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 CHRNA2Q15822 529 aa9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 GRIK5Q16478 980 aa9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 COL13A1Q5TAT6 717 aaPredicted RBP9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 GDF6Q6KF10 455 aaPredicted RBP9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 PMEPA1Q969W9 287 aa9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 CNTN3Q9P232 1028 aa9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 RGPD3A6NKT7 1758 aaPredicted RBP9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 RGPD4Q7Z3J3 1758 aa9.54□□□□□ -0.88
PPP4R1-216ENST00000580283 A0A0A0MRY4 1105 aa9.53□□□□□ -0.88
PPP4R1-216ENST00000580283 SMNDC1O75940 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
PPP4R1-216ENST00000580283 C1orf127Q8N9H9 656 aa9.53□□□□□ -0.88
PPP4R1-216ENST00000580283 KIAA0232Q92628 1395 aa9.52□□□□□ -0.88
PPP4R1-216ENST00000580283 PHACTR2O75167 634 aa9.52□□□□□ -0.89
PPP4R1-216ENST00000580283 KIF4AO95239 1232 aa9.52□□□□□ -0.89
PPP4R1-216ENST00000580283 CEP135Q66GS9 1140 aa9.52□□□□□ -0.89
PPP4R1-216ENST00000580283 GJD3Q8N144 294 aa9.52□□□□□ -0.89
PPP4R1-216ENST00000580283 SNX29Q8TEQ0 813 aa9.52□□□□□ -0.89
PPP4R1-216ENST00000580283 NACC1Q96RE7 527 aa9.52□□□□□ -0.89
PPP4R1-216ENST00000580283 C14orf93Q9H972 538 aaKnown RBP9.52□□□□□ -0.89
PPP4R1-216ENST00000580283 PRDM11Q9NQV5 511 aa9.52□□□□□ -0.89
PPP4R1-216ENST00000580283 USP35Q9P2H5 1018 aa9.52□□□□□ -0.89
PPP4R1-216ENST00000580283 PARP4Q9UKK3 1724 aaKnown RBP9.52□□□□□ -0.89
PPP4R1-216ENST00000580283 ANKARQ7Z5J8 1434 aa9.51□□□□□ -0.89
PPP4R1-216ENST00000580283 MSTNO14793 375 aa9.51□□□□□ -0.89
PPP4R1-216ENST00000580283 TNFRSF21O75509 655 aa9.51□□□□□ -0.89
PPP4R1-216ENST00000580283 ARHGAP4P98171 946 aa9.51□□□□□ -0.89
PPP4R1-216ENST00000580283 CACTIN-AS1Q8N1I8 211 aa9.51□□□□□ -0.89
PPP4R1-216ENST00000580283 PRAM1Q96QH2 718 aa9.51□□□□□ -0.89
PPP4R1-216ENST00000580283 SYT17Q9BSW7 474 aa9.51□□□□□ -0.89
PPP4R1-216ENST00000580283 GNEQ9Y223 722 aaKnown RBP9.51□□□□□ -0.89
PPP4R1-216ENST00000580283 LMO7Q8WWI1 1683 aa9.51□□□□□ -0.89
PPP4R1-216ENST00000580283 ANKRD30BQ9BXX2 1392 aa9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 FAM177BA6PVY3 158 aa9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 C1QTNF9BB2RNN3 333 aa9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 PLSCR1O15162 318 aa9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 ZBTB7AO95365 584 aa9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 ZC3H6P61129 1189 aaKnown RBP9.5□□□□□ -0.89
PPP4R1-216ENST00000580283 ATP11AP98196 1134 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms